RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
PROM1-219ENST00000539194 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
PROM1-219ENST00000539194 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
PROM1-219ENST00000539194 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
PROM1-219ENST00000539194 CCNB3Q8WWL7 1395 aa10.42□□□□□ -0.74
PROM1-219ENST00000539194 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
PROM1-219ENST00000539194 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
PROM1-219ENST00000539194 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.74
PROM1-219ENST00000539194 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
PROM1-219ENST00000539194 URB2Q14146 1524 aaKnown RBP10.4□□□□□ -0.75
PROM1-219ENST00000539194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
PROM1-219ENST00000539194 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
PROM1-219ENST00000539194 PHLDB1Q86UU1 1377 aa10.38□□□□□ -0.75
PROM1-219ENST00000539194 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
PROM1-219ENST00000539194 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
PROM1-219ENST00000539194 CASKIN1Q8WXD9 1431 aa10.37□□□□□ -0.75
PROM1-219ENST00000539194 NESP48681 1621 aa10.37□□□□□ -0.75
PROM1-219ENST00000539194 THOC2Q8NI27 1593 aaKnown RBP10.36□□□□□ -0.75
PROM1-219ENST00000539194 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
PROM1-219ENST00000539194 MIER1Q8N108 512 aa10.35□□□□□ -0.75
PROM1-219ENST00000539194 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
PROM1-219ENST00000539194 GRIN2BQ13224 1484 aa10.33□□□□□ -0.76
PROM1-219ENST00000539194 RAB3GAP2Q9H2M9 1393 aa10.32□□□□□ -0.76
PROM1-219ENST00000539194 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
PROM1-219ENST00000539194 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
PROM1-219ENST00000539194 GTF3C3Q9Y5Q9 886 aa10.3□□□□□ -0.76
PROM1-219ENST00000539194 APLP2Q06481 763 aa10.3□□□□□ -0.76
PROM1-219ENST00000539194 SETD5Q9C0A6 1442 aa10.29□□□□□ -0.76
PROM1-219ENST00000539194 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
PROM1-219ENST00000539194 FHOD3Q2V2M9 1422 aa10.27□□□□□ -0.76
PROM1-219ENST00000539194 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.76
PROM1-219ENST00000539194 CENPBP07199 599 aaPredicted RBP10.27□□□□□ -0.76
PROM1-219ENST00000539194 PTPN23Q9H3S7 1636 aa10.27□□□□□ -0.77
PROM1-219ENST00000539194 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
PROM1-219ENST00000539194 PTPRKQ15262 1439 aa10.26□□□□□ -0.77
PROM1-219ENST00000539194 DENND4BO75064 1496 aaPredicted RBP10.25□□□□□ -0.77
PROM1-219ENST00000539194 SUPT6HQ7KZ85 1726 aaKnown RBP10.25□□□□□ -0.77
PROM1-219ENST00000539194 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
PROM1-219ENST00000539194 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
PROM1-219ENST00000539194 RANGAP1P46060 587 aaPredicted RBP10.24□□□□□ -0.77
PROM1-219ENST00000539194 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
PROM1-219ENST00000539194 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
PROM1-219ENST00000539194 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
PROM1-219ENST00000539194 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
PROM1-219ENST00000539194 HFM1A2PYH4 1435 aa10.22□□□□□ -0.77
PROM1-219ENST00000539194 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
PROM1-219ENST00000539194 WDR62O43379 1518 aa10.19□□□□□ -0.78
PROM1-219ENST00000539194 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
PROM1-219ENST00000539194 NAIPQ13075 1403 aa10.18□□□□□ -0.78
PROM1-219ENST00000539194 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
PROM1-219ENST00000539194 KDM6BO15054 1643 aa10.18□□□□□ -0.78
PROM1-219ENST00000539194 AKNAQ7Z591 1439 aa10.17□□□□□ -0.78
PROM1-219ENST00000539194 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
PROM1-219ENST00000539194 MYOM3Q5VTT5 1437 aa10.17□□□□□ -0.78
PROM1-219ENST00000539194 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
PROM1-219ENST00000539194 UACAQ9BZF9 1416 aa10.16□□□□□ -0.78
PROM1-219ENST00000539194 CCDC18Q5T9S5 1454 aa10.16□□□□□ -0.78
PROM1-219ENST00000539194 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.79
PROM1-219ENST00000539194 PPP1R15AO75807 674 aaPredicted RBP10.14□□□□□ -0.79
PROM1-219ENST00000539194 DNAJC5BQ9UF47 199 aa10.13□□□□□ -0.79
PROM1-219ENST00000539194 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
PROM1-219ENST00000539194 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
PROM1-219ENST00000539194 KIAA0556O60303 1618 aa10.12□□□□□ -0.79
PROM1-219ENST00000539194 DISP1Q96F81 1524 aa10.12□□□□□ -0.79
PROM1-219ENST00000539194 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
PROM1-219ENST00000539194 DNMT1P26358 1616 aaKnown RBP10.1□□□□□ -0.79
PROM1-219ENST00000539194 CROCC2H7BZ55 1655 aa10.1□□□□□ -0.79
PROM1-219ENST00000539194 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
PROM1-219ENST00000539194 MIA2Q96PC5 1412 aa10.09□□□□□ -0.79
PROM1-219ENST00000539194 SIN3AQ96ST3 1273 aa10.08□□□□□ -0.8
PROM1-219ENST00000539194 EIF4G3O43432 1585 aaKnown RBP10.07□□□□□ -0.8
PROM1-219ENST00000539194 CDK13Q14004 1512 aaKnown RBP10.06□□□□□ -0.8
PROM1-219ENST00000539194 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
PROM1-219ENST00000539194 YTHDC1Q96MU7 727 aaKnown RBP10.06□□□□□ -0.8
PROM1-219ENST00000539194 RAPGEF6Q8TEU7 1601 aa10.06□□□□□ -0.8
PROM1-219ENST00000539194 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
PROM1-219ENST00000539194 ADGBQ8N7X0 1667 aa10.05□□□□□ -0.8
PROM1-219ENST00000539194 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
PROM1-219ENST00000539194 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
PROM1-219ENST00000539194 ZNF608Q9ULD9 1512 aaPredicted RBP10.04□□□□□ -0.8
PROM1-219ENST00000539194 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
PROM1-219ENST00000539194 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
PROM1-219ENST00000539194 CEP170Q5SW79 1584 aa10.03□□□□□ -0.8
PROM1-219ENST00000539194 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
PROM1-219ENST00000539194 ROCK1Q13464 1354 aa10.02□□□□□ -0.8
PROM1-219ENST00000539194 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
PROM1-219ENST00000539194 ITGAEP38570 1179 aa10.02□□□□□ -0.81
PROM1-219ENST00000539194 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
PROM1-219ENST00000539194 ITSN2Q9NZM3 1697 aa10□□□□□ -0.81
PROM1-219ENST00000539194 GRIN2AQ12879 1464 aa10□□□□□ -0.81
PROM1-219ENST00000539194 MBD5Q9P267 1494 aa10□□□□□ -0.81
PROM1-219ENST00000539194 CDC42BPAQ5VT25 1732 aa10□□□□□ -0.81
PROM1-219ENST00000539194 DAPK1P53355 1430 aa9.99□□□□□ -0.81
PROM1-219ENST00000539194 SPATA31E1Q6ZUB1 1445 aa9.99□□□□□ -0.81
PROM1-219ENST00000539194 ADGRL2O95490 1459 aa9.99□□□□□ -0.81
PROM1-219ENST00000539194 CCER2I3L3R5 266 aa9.98□□□□□ -0.81
PROM1-219ENST00000539194 ABCC5O15440 1437 aa9.98□□□□□ -0.81
PROM1-219ENST00000539194 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
PROM1-219ENST00000539194 KIF14Q15058 1648 aa9.97□□□□□ -0.81
PROM1-219ENST00000539194 PZPP20742 1482 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms