RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 TRHP20396 242 aaPredicted RBP36.61■■■■□ 3.45
CCDC78-215ENST00000538176 ERCC6L2Q5T890 1561 aa36.61■■■■□ 3.45
CCDC78-215ENST00000538176 KIAA0586Q9BVV6 1533 aa36.6■■■■□ 3.45
CCDC78-215ENST00000538176 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
CCDC78-215ENST00000538176 RAPGEF2Q9Y4G8 1499 aa36.39■■■■□ 3.42
CCDC78-215ENST00000538176 CARMIL2Q6F5E8 1435 aa36.28■■■■□ 3.4
CCDC78-215ENST00000538176 IQGAP2Q13576 1575 aa36.26■■■■□ 3.39
CCDC78-215ENST00000538176 NPM1P06748 294 aaKnown RBP eCLIP36.25■■■■□ 3.39
CCDC78-215ENST00000538176 PTPRGP23470 1445 aa36.17■■■■□ 3.38
CCDC78-215ENST00000538176 TNIKQ9UKE5 1360 aa36.15■■■■□ 3.38
CCDC78-215ENST00000538176 PRXQ9BXM0 1461 aa36.11■■■■□ 3.37
CCDC78-215ENST00000538176 UGGT2Q9NYU1 1516 aa36.08■■■■□ 3.37
CCDC78-215ENST00000538176 CSRNP3Q8WYN3 585 aa36.06■■■■□ 3.36
CCDC78-215ENST00000538176 EEA1Q15075 1411 aa36.04■■■■□ 3.36
CCDC78-215ENST00000538176 ADCY10Q96PN6 1610 aa36.03■■■■□ 3.36
CCDC78-215ENST00000538176 DISP1Q96F81 1524 aa36.02■■■■□ 3.36
CCDC78-215ENST00000538176 MAPKBP1O60336 1514 aa36■■■■□ 3.35
CCDC78-215ENST00000538176 CTTNBP2Q8WZ74 1663 aa35.97■■■■□ 3.35
CCDC78-215ENST00000538176 TTBK1Q5TCY1 1321 aaPredicted RBP35.96■■■■□ 3.35
CCDC78-215ENST00000538176 GOLGA3Q08378 1498 aa35.92■■■■□ 3.34
CCDC78-215ENST00000538176 ABCC10Q5T3U5 1492 aa35.91■■■■□ 3.34
CCDC78-215ENST00000538176 UHRF1BP1LA0JNW5 1464 aa35.9■■■■□ 3.34
CCDC78-215ENST00000538176 UACAQ9BZF9 1416 aa35.9■■■■□ 3.34
CCDC78-215ENST00000538176 KIAA0556O60303 1618 aa35.89■■■■□ 3.34
CCDC78-215ENST00000538176 FAM69CQ0P6D2 419 aa35.88■■■■□ 3.33
CCDC78-215ENST00000538176 ABCC2Q92887 1545 aa35.87■■■■□ 3.33
CCDC78-215ENST00000538176 KIF13AQ9H1H9 1805 aa35.85■■■■□ 3.33
CCDC78-215ENST00000538176 FAM9AQ8IZU1 332 aaPredicted RBP35.82■■■■□ 3.32
CCDC78-215ENST00000538176 CHIC1Q5VXU3 224 aa35.78■■■■□ 3.32
CCDC78-215ENST00000538176 DIP2BQ9P265 1576 aa35.74■■■■□ 3.31
CCDC78-215ENST00000538176 PLB1Q6P1J6 1458 aa35.73■■■■□ 3.31
CCDC78-215ENST00000538176 KDM5BQ9UGL1 1544 aa35.71■■■■□ 3.31
CCDC78-215ENST00000538176 ASXL2Q76L83 1435 aa35.67■■■■□ 3.3
CCDC78-215ENST00000538176 KIF21BO75037 1637 aa35.57■■■■□ 3.28
CCDC78-215ENST00000538176 ABCA8O94911 1581 aa35.55■■■■□ 3.28
CCDC78-215ENST00000538176 GLI2P10070 1586 aa35.55■■■■□ 3.28
CCDC78-215ENST00000538176 ZCCHC11Q5TAX3 1644 aaKnown RBP35.54■■■■□ 3.28
CCDC78-215ENST00000538176 P3H3Q8IVL6 736 aa35.52■■■■□ 3.28
CCDC78-215ENST00000538176 SAMD9Q5K651 1589 aa35.5■■■■□ 3.27
CCDC78-215ENST00000538176 EPRSP07814 1512 aaKnown RBP35.46■■■■□ 3.27
CCDC78-215ENST00000538176 WDR7Q9Y4E6 1490 aa35.42■■■■□ 3.26
CCDC78-215ENST00000538176 TSPOAP1O95153 1857 aa35.42■■■■□ 3.26
CCDC78-215ENST00000538176 UBTFP17480 764 aaKnown RBP35.38■■■■□ 3.25
CCDC78-215ENST00000538176 RANGAP1P46060 587 aaPredicted RBP35.36■■■■□ 3.25
CCDC78-215ENST00000538176 EFCAB5A4FU69 1503 aa35.33■■■■□ 3.25
CCDC78-215ENST00000538176 KDM6BO15054 1643 aa35.32■■■■□ 3.25
CCDC78-215ENST00000538176 MAP3K4Q9Y6R4 1608 aa35.3■■■■□ 3.24
CCDC78-215ENST00000538176 TEX14Q8IWB6 1497 aa35.29■■■■□ 3.24
CCDC78-215ENST00000538176 ATP10BO94823 1461 aa35.29■■■■□ 3.24
CCDC78-215ENST00000538176 KCNH8Q96L42 1107 aa35.27■■■■□ 3.24
CCDC78-215ENST00000538176 RAPGEF6Q8TEU7 1601 aa35.27■■■■□ 3.24
CCDC78-215ENST00000538176 FHOD3Q2V2M9 1422 aa35.25■■■■□ 3.23
CCDC78-215ENST00000538176 PPRC1Q5VV67 1664 aaKnown RBP35.24■■■■□ 3.23
CCDC78-215ENST00000538176 CD109Q6YHK3 1445 aa35.19■■■■□ 3.22
CCDC78-215ENST00000538176 ARID3CA6NKF2 412 aa35.18■■■■□ 3.22
CCDC78-215ENST00000538176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.18■■■■□ 3.22
CCDC78-215ENST00000538176 HNRNPUL2Q1KMD3 747 aaKnown RBP35.18■■■■□ 3.22
CCDC78-215ENST00000538176 EHMT2Q96KQ7 1210 aa35.18■■■■□ 3.22
CCDC78-215ENST00000538176 AEBP2Q6ZN18 517 aaPredicted RBP35.17■■■■□ 3.22
CCDC78-215ENST00000538176 CFAP43Q8NDM7 1665 aa35.17■■■■□ 3.22
CCDC78-215ENST00000538176 MAGI3Q5TCQ9 1506 aa35.15■■■■□ 3.22
CCDC78-215ENST00000538176 NUP153P49790 1475 aaKnown RBP35.13■■■■□ 3.21
CCDC78-215ENST00000538176 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
CCDC78-215ENST00000538176 FMN1Q68DA7 1419 aa35.07■■■■□ 3.21
CCDC78-215ENST00000538176 ARHGAP35Q9NRY4 1499 aa35.02■■■■□ 3.2
CCDC78-215ENST00000538176 COL17A1Q9UMD9 1497 aaPredicted RBP35■■■■□ 3.19
CCDC78-215ENST00000538176 PHLDB1Q86UU1 1377 aa35■■■■□ 3.19
CCDC78-215ENST00000538176 ABCA9Q8IUA7 1624 aa34.98■■■■□ 3.19
CCDC78-215ENST00000538176 CDK11AQ9UQ88 783 aaPredicted RBP34.89■■■■□ 3.18
CCDC78-215ENST00000538176 ATP1B4Q9UN42 357 aaPredicted RBP34.88■■■■□ 3.17
CCDC78-215ENST00000538176 ARAP3Q8WWN8 1544 aa34.86■■■■□ 3.17
CCDC78-215ENST00000538176 HECW1Q76N89 1606 aa34.85■■■■□ 3.17
CCDC78-215ENST00000538176 NEO1Q92859 1461 aa34.83■■■■□ 3.17
CCDC78-215ENST00000538176 CDK13Q14004 1512 aaKnown RBP34.77■■■■□ 3.16
CCDC78-215ENST00000538176 KDM4FA0A1W2PPD8 638 aa34.75■■■■□ 3.15
CCDC78-215ENST00000538176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.72■■■■□ 3.15
CCDC78-215ENST00000538176 CLIP1P30622 1438 aa34.71■■■■□ 3.15
CCDC78-215ENST00000538176 CASKIN1Q8WXD9 1431 aa34.69■■■■□ 3.14
CCDC78-215ENST00000538176 CFAP74Q9C0B2 1584 aa34.63■■■■□ 3.13
CCDC78-215ENST00000538176 FANCAO15360 1455 aa34.63■■■■□ 3.13
CCDC78-215ENST00000538176 CCDC18Q5T9S5 1454 aa34.63■■■■□ 3.13
CCDC78-215ENST00000538176 TROQ12816 1431 aaPredicted RBP34.62■■■■□ 3.13
CCDC78-215ENST00000538176 AKNAQ7Z591 1439 aa34.62■■■■□ 3.13
CCDC78-215ENST00000538176 RAPGEF3O95398 923 aa34.61■■■■□ 3.13
CCDC78-215ENST00000538176 PLCH2O75038 1416 aa34.6■■■■□ 3.13
CCDC78-215ENST00000538176 TTC37Q6PGP7 1564 aa34.59■■■■□ 3.13
CCDC78-215ENST00000538176 ADGRL1O94910 1474 aa34.58■■■■□ 3.13
CCDC78-215ENST00000538176 DENND4BO75064 1496 aaPredicted RBP34.56■■■■□ 3.12
CCDC78-215ENST00000538176 FYCO1Q9BQS8 1478 aa34.56■■■■□ 3.12
CCDC78-215ENST00000538176 EFCAB2Q5VUJ9 269 aa34.54■■■■□ 3.12
CCDC78-215ENST00000538176 PCF11O94913 1555 aaKnown RBP34.53■■■■□ 3.12
CCDC78-215ENST00000538176 KIF14Q15058 1648 aa34.53■■■■□ 3.12
CCDC78-215ENST00000538176 LRRIQ1Q96JM4 1722 aa34.5■■■■□ 3.11
CCDC78-215ENST00000538176 MYO5CQ9NQX4 1742 aa34.46■■■■□ 3.11
CCDC78-215ENST00000538176 FRMPD1Q5SYB0 1578 aa34.43■■■■□ 3.1
CCDC78-215ENST00000538176 RICTORQ6R327 1708 aa34.41■■■■□ 3.1
CCDC78-215ENST00000538176 CEP162Q5TB80 1403 aa34.4■■■■□ 3.1
CCDC78-215ENST00000538176 SCAPERQ9BY12 1400 aa34.4■■■■□ 3.1
CCDC78-215ENST00000538176 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
CCDC78-215ENST00000538176 ARHGAP5Q13017 1502 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms