RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 ERCC6L2Q5T890 1561 aa39.11■■■■□ 3.85
CHFR-215ENST00000537551 KIAA0586Q9BVV6 1533 aa39.09■■■■□ 3.85
CHFR-215ENST00000537551 PRG4Q92954 1404 aaPredicted RBP39.08■■■■□ 3.85
CHFR-215ENST00000537551 RAPGEF2Q9Y4G8 1499 aa39.06■■■■□ 3.84
CHFR-215ENST00000537551 CHIC1Q5VXU3 224 aa38.98■■■■□ 3.83
CHFR-215ENST00000537551 CSRNP3Q8WYN3 585 aa38.89■■■■□ 3.82
CHFR-215ENST00000537551 PRXQ9BXM0 1461 aa38.85■■■■□ 3.81
CHFR-215ENST00000537551 IQGAP2Q13576 1575 aa38.82■■■■□ 3.81
CHFR-215ENST00000537551 EEA1Q15075 1411 aa38.82■■■■□ 3.81
CHFR-215ENST00000537551 FAM9AQ8IZU1 332 aaPredicted RBP38.81■■■■□ 3.8
CHFR-215ENST00000537551 CARMIL2Q6F5E8 1435 aa38.73■■■■□ 3.79
CHFR-215ENST00000537551 TRHP20396 242 aaPredicted RBP38.73■■■■□ 3.79
CHFR-215ENST00000537551 TTBK1Q5TCY1 1321 aaPredicted RBP38.67■■■■□ 3.78
CHFR-215ENST00000537551 CTTNBP2Q8WZ74 1663 aa38.62■■■■□ 3.77
CHFR-215ENST00000537551 PTPRGP23470 1445 aa38.62■■■■□ 3.77
CHFR-215ENST00000537551 TNIKQ9UKE5 1360 aa38.6■■■■□ 3.77
CHFR-215ENST00000537551 UGGT2Q9NYU1 1516 aa38.6■■■■□ 3.77
CHFR-215ENST00000537551 DISP1Q96F81 1524 aa38.56■■■■□ 3.76
CHFR-215ENST00000537551 NPM1P06748 294 aaKnown RBP eCLIP38.53■■■■□ 3.76
CHFR-215ENST00000537551 KIAA0556O60303 1618 aa38.45■■■■□ 3.75
CHFR-215ENST00000537551 GOLGA3Q08378 1498 aa38.43■■■■□ 3.74
CHFR-215ENST00000537551 ADCY10Q96PN6 1610 aa38.42■■■■□ 3.74
CHFR-215ENST00000537551 KIF21BO75037 1637 aa38.38■■■■□ 3.74
CHFR-215ENST00000537551 EHMT2Q96KQ7 1210 aa38.37■■■■□ 3.73
CHFR-215ENST00000537551 UACAQ9BZF9 1416 aa38.32■■■■□ 3.73
CHFR-215ENST00000537551 RANGAP1P46060 587 aaPredicted RBP38.3■■■■□ 3.72
CHFR-215ENST00000537551 P3H3Q8IVL6 736 aa38.29■■■■□ 3.72
CHFR-215ENST00000537551 UBTFP17480 764 aaKnown RBP38.26■■■■□ 3.72
CHFR-215ENST00000537551 UHRF1BP1LA0JNW5 1464 aa38.24■■■■□ 3.71
CHFR-215ENST00000537551 ABCC2Q92887 1545 aa38.22■■■■□ 3.71
CHFR-215ENST00000537551 MAPKBP1O60336 1514 aa38.2■■■■□ 3.71
CHFR-215ENST00000537551 FAM69CQ0P6D2 419 aa38.13■■■■□ 3.69
CHFR-215ENST00000537551 PLB1Q6P1J6 1458 aa38.13■■■■□ 3.69
CHFR-215ENST00000537551 SAMD9Q5K651 1589 aa38.11■■■■□ 3.69
CHFR-215ENST00000537551 ABCC10Q5T3U5 1492 aa38.09■■■■□ 3.69
CHFR-215ENST00000537551 KDM5BQ9UGL1 1544 aa38.06■■■■□ 3.68
CHFR-215ENST00000537551 KIF13AQ9H1H9 1805 aa38.04■■■■□ 3.68
CHFR-215ENST00000537551 ABCA8O94911 1581 aa38.04■■■■□ 3.68
CHFR-215ENST00000537551 ASXL2Q76L83 1435 aa38.03■■■■□ 3.68
CHFR-215ENST00000537551 DIP2BQ9P265 1576 aa37.98■■■■□ 3.67
CHFR-215ENST00000537551 FHOD3Q2V2M9 1422 aa37.98■■■■□ 3.67
CHFR-215ENST00000537551 ZCCHC11Q5TAX3 1644 aaKnown RBP37.98■■■■□ 3.67
CHFR-215ENST00000537551 EFCAB5A4FU69 1503 aa37.95■■■■□ 3.67
CHFR-215ENST00000537551 ARID3CA6NKF2 412 aa37.91■■■■□ 3.66
CHFR-215ENST00000537551 RAPGEF6Q8TEU7 1601 aa37.83■■■■□ 3.65
CHFR-215ENST00000537551 WDR7Q9Y4E6 1490 aa37.78■■■■□ 3.64
CHFR-215ENST00000537551 EPRSP07814 1512 aaKnown RBP37.78■■■■□ 3.64
CHFR-215ENST00000537551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.78■■■■□ 3.64
CHFR-215ENST00000537551 HNRNPUL2Q1KMD3 747 aaKnown RBP37.78■■■■□ 3.64
CHFR-215ENST00000537551 ATP10BO94823 1461 aa37.77■■■■□ 3.64
CHFR-215ENST00000537551 ARHGAP35Q9NRY4 1499 aa37.77■■■■□ 3.64
CHFR-215ENST00000537551 GLI2P10070 1586 aa37.76■■■■□ 3.63
CHFR-215ENST00000537551 KCNH8Q96L42 1107 aa37.75■■■■□ 3.63
CHFR-215ENST00000537551 TSPOAP1O95153 1857 aa37.73■■■■□ 3.63
CHFR-215ENST00000537551 NUP153P49790 1475 aaKnown RBP37.69■■■■□ 3.62
CHFR-215ENST00000537551 FMN1Q68DA7 1419 aa37.66■■■■□ 3.62
CHFR-215ENST00000537551 ATP1B4Q9UN42 357 aaPredicted RBP37.65■■■■□ 3.62
CHFR-215ENST00000537551 MAP3K4Q9Y6R4 1608 aa37.56■■■■□ 3.6
CHFR-215ENST00000537551 CLIP1P30622 1438 aa37.54■■■■□ 3.6
CHFR-215ENST00000537551 PLEKHD1A6NEE1 506 aa37.54■■■■□ 3.6
CHFR-215ENST00000537551 CD109Q6YHK3 1445 aa37.51■■■■□ 3.59
CHFR-215ENST00000537551 PPRC1Q5VV67 1664 aaKnown RBP37.5■■■■□ 3.59
CHFR-215ENST00000537551 TEX14Q8IWB6 1497 aa37.47■■■■□ 3.59
CHFR-215ENST00000537551 KDM6BO15054 1643 aa37.47■■■■□ 3.59
CHFR-215ENST00000537551 HECW1Q76N89 1606 aa37.46■■■■□ 3.59
CHFR-215ENST00000537551 CFAP43Q8NDM7 1665 aa37.45■■■■□ 3.59
CHFR-215ENST00000537551 LOC105371045A0A1W2PR82 267 aa37.44■■■■□ 3.58
CHFR-215ENST00000537551 CDK13Q14004 1512 aaKnown RBP37.43■■■■□ 3.58
CHFR-215ENST00000537551 MAGI3Q5TCQ9 1506 aa37.37■■■■□ 3.57
CHFR-215ENST00000537551 CDK11AQ9UQ88 783 aaPredicted RBP37.35■■■■□ 3.57
CHFR-215ENST00000537551 CASKIN1Q8WXD9 1431 aa37.34■■■■□ 3.57
CHFR-215ENST00000537551 ABCA9Q8IUA7 1624 aa37.33■■■■□ 3.57
CHFR-215ENST00000537551 CEP162Q5TB80 1403 aa37.32■■■■□ 3.56
CHFR-215ENST00000537551 PCF11O94913 1555 aaKnown RBP37.29■■■■□ 3.56
CHFR-215ENST00000537551 COL17A1Q9UMD9 1497 aaPredicted RBP37.24■■■■□ 3.55
CHFR-215ENST00000537551 FYCO1Q9BQS8 1478 aa37.2■■■■□ 3.55
CHFR-215ENST00000537551 CCDC18Q5T9S5 1454 aa37.2■■■■□ 3.54
CHFR-215ENST00000537551 LRRIQ1Q96JM4 1722 aa37.19■■■■□ 3.54
CHFR-215ENST00000537551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.18■■■■□ 3.54
CHFR-215ENST00000537551 TROQ12816 1431 aaPredicted RBP37.14■■■■□ 3.54
CHFR-215ENST00000537551 PHLDB1Q86UU1 1377 aa37.12■■■■□ 3.53
CHFR-215ENST00000537551 TTC37Q6PGP7 1564 aa37.1■■■■□ 3.53
CHFR-215ENST00000537551 NEO1Q92859 1461 aa37.08■■■■□ 3.53
CHFR-215ENST00000537551 ARAP3Q8WWN8 1544 aa37.05■■■■□ 3.52
CHFR-215ENST00000537551 KIF14Q15058 1648 aa37.04■■■■□ 3.52
CHFR-215ENST00000537551 FANCAO15360 1455 aa37.01■■■■□ 3.51
CHFR-215ENST00000537551 PLCH2O75038 1416 aa37■■■■□ 3.51
CHFR-215ENST00000537551 AKNAQ7Z591 1439 aa36.97■■■■□ 3.51
CHFR-215ENST00000537551 RAPGEF3O95398 923 aa36.96■■■■□ 3.51
CHFR-215ENST00000537551 CFAP74Q9C0B2 1584 aa36.94■■■■□ 3.5
CHFR-215ENST00000537551 EFCAB2Q5VUJ9 269 aa36.93■■■■□ 3.5
CHFR-215ENST00000537551 MYO5CQ9NQX4 1742 aa36.9■■■■□ 3.5
CHFR-215ENST00000537551 AEBP2Q6ZN18 517 aaPredicted RBP36.9■■■■□ 3.5
CHFR-215ENST00000537551 MTUS2Q5JR59 1369 aa36.88■■■■□ 3.49
CHFR-215ENST00000537551 VPS8Q8N3P4 1428 aa36.87■■■■□ 3.49
CHFR-215ENST00000537551 DENND4BO75064 1496 aaPredicted RBP36.87■■■■□ 3.49
CHFR-215ENST00000537551 ARHGAP5Q13017 1502 aa36.83■■■■□ 3.49
CHFR-215ENST00000537551 ADGRL1O94910 1474 aa36.82■■■■□ 3.48
CHFR-215ENST00000537551 SCAPERQ9BY12 1400 aa36.79■■■■□ 3.48
CHFR-215ENST00000537551 FRMPD1Q5SYB0 1578 aa36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms