RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 KIAA0586Q9BVV6 1533 aa29.38■■■□□ 2.29
SFSWAP-205ENST00000537164 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
SFSWAP-205ENST00000537164 PRG4Q92954 1404 aaPredicted RBP29.33■■■□□ 2.29
SFSWAP-205ENST00000537164 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
SFSWAP-205ENST00000537164 IQGAP2Q13576 1575 aa29.17■■■□□ 2.26
SFSWAP-205ENST00000537164 PRXQ9BXM0 1461 aa29.12■■■□□ 2.25
SFSWAP-205ENST00000537164 TRHP20396 242 aaPredicted RBP29.04■■■□□ 2.24
SFSWAP-205ENST00000537164 CTTNBP2Q8WZ74 1663 aa29.03■■■□□ 2.24
SFSWAP-205ENST00000537164 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
SFSWAP-205ENST00000537164 CARMIL2Q6F5E8 1435 aa29.03■■■□□ 2.24
SFSWAP-205ENST00000537164 EEA1Q15075 1411 aa29.02■■■□□ 2.24
SFSWAP-205ENST00000537164 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
SFSWAP-205ENST00000537164 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
SFSWAP-205ENST00000537164 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
SFSWAP-205ENST00000537164 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
SFSWAP-205ENST00000537164 PTPRGP23470 1445 aa28.94■■■□□ 2.22
SFSWAP-205ENST00000537164 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
SFSWAP-205ENST00000537164 KIAA0556O60303 1618 aa28.9■■■□□ 2.22
SFSWAP-205ENST00000537164 MAPKBP1O60336 1514 aa28.87■■■□□ 2.21
SFSWAP-205ENST00000537164 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
SFSWAP-205ENST00000537164 KIF13AQ9H1H9 1805 aa28.81■■■□□ 2.2
SFSWAP-205ENST00000537164 UHRF1BP1LA0JNW5 1464 aa28.81■■■□□ 2.2
SFSWAP-205ENST00000537164 GOLGA3Q08378 1498 aa28.81■■■□□ 2.2
SFSWAP-205ENST00000537164 ABCC2Q92887 1545 aa28.77■■■□□ 2.2
SFSWAP-205ENST00000537164 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
SFSWAP-205ENST00000537164 KIF21BO75037 1637 aa28.75■■■□□ 2.19
SFSWAP-205ENST00000537164 ABCC10Q5T3U5 1492 aa28.74■■■□□ 2.19
SFSWAP-205ENST00000537164 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
SFSWAP-205ENST00000537164 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
SFSWAP-205ENST00000537164 DIP2BQ9P265 1576 aa28.69■■■□□ 2.18
SFSWAP-205ENST00000537164 KDM5BQ9UGL1 1544 aa28.67■■■□□ 2.18
SFSWAP-205ENST00000537164 SAMD9Q5K651 1589 aa28.66■■■□□ 2.18
SFSWAP-205ENST00000537164 ABCA8O94911 1581 aa28.62■■■□□ 2.17
SFSWAP-205ENST00000537164 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
SFSWAP-205ENST00000537164 ZCCHC11Q5TAX3 1644 aaKnown RBP28.59■■■□□ 2.17
SFSWAP-205ENST00000537164 FAM69CQ0P6D2 419 aa28.59■■■□□ 2.17
SFSWAP-205ENST00000537164 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
SFSWAP-205ENST00000537164 GLI2P10070 1586 aa28.51■■■□□ 2.15
SFSWAP-205ENST00000537164 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
SFSWAP-205ENST00000537164 EFCAB5A4FU69 1503 aa28.46■■■□□ 2.15
SFSWAP-205ENST00000537164 EPRSP07814 1512 aaKnown RBP28.43■■■□□ 2.14
SFSWAP-205ENST00000537164 WDR7Q9Y4E6 1490 aa28.4■■■□□ 2.14
SFSWAP-205ENST00000537164 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
SFSWAP-205ENST00000537164 RAPGEF6Q8TEU7 1601 aa28.4■■■□□ 2.14
SFSWAP-205ENST00000537164 FHOD3Q2V2M9 1422 aa28.37■■■□□ 2.13
SFSWAP-205ENST00000537164 MAP3K4Q9Y6R4 1608 aa28.37■■■□□ 2.13
SFSWAP-205ENST00000537164 PPRC1Q5VV67 1664 aaKnown RBP28.37■■■□□ 2.13
SFSWAP-205ENST00000537164 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
SFSWAP-205ENST00000537164 ATP10BO94823 1461 aa28.35■■■□□ 2.13
SFSWAP-205ENST00000537164 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
SFSWAP-205ENST00000537164 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
SFSWAP-205ENST00000537164 KDM6BO15054 1643 aa28.26■■■□□ 2.11
SFSWAP-205ENST00000537164 EHMT2Q96KQ7 1210 aa28.26■■■□□ 2.11
SFSWAP-205ENST00000537164 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
SFSWAP-205ENST00000537164 CFAP43Q8NDM7 1665 aa28.26■■■□□ 2.11
SFSWAP-205ENST00000537164 TEX14Q8IWB6 1497 aa28.21■■■□□ 2.11
SFSWAP-205ENST00000537164 MAGI3Q5TCQ9 1506 aa28.18■■■□□ 2.1
SFSWAP-205ENST00000537164 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
SFSWAP-205ENST00000537164 ARID3CA6NKF2 412 aa28.17■■■□□ 2.1
SFSWAP-205ENST00000537164 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
SFSWAP-205ENST00000537164 CD109Q6YHK3 1445 aa28.15■■■□□ 2.1
SFSWAP-205ENST00000537164 ABCA9Q8IUA7 1624 aa28.14■■■□□ 2.09
SFSWAP-205ENST00000537164 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
SFSWAP-205ENST00000537164 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
SFSWAP-205ENST00000537164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.07■■■□□ 2.08
SFSWAP-205ENST00000537164 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
SFSWAP-205ENST00000537164 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
SFSWAP-205ENST00000537164 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
SFSWAP-205ENST00000537164 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
SFSWAP-205ENST00000537164 CLIP1P30622 1438 aa27.96■■■□□ 2.07
SFSWAP-205ENST00000537164 ARAP3Q8WWN8 1544 aa27.95■■■□□ 2.06
SFSWAP-205ENST00000537164 PHLDB1Q86UU1 1377 aa27.95■■■□□ 2.06
SFSWAP-205ENST00000537164 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
SFSWAP-205ENST00000537164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.93■■■□□ 2.06
SFSWAP-205ENST00000537164 PCF11O94913 1555 aaKnown RBP27.91■■■□□ 2.06
SFSWAP-205ENST00000537164 NEO1Q92859 1461 aa27.91■■■□□ 2.06
SFSWAP-205ENST00000537164 TTC37Q6PGP7 1564 aa27.88■■■□□ 2.05
SFSWAP-205ENST00000537164 ATP1B4Q9UN42 357 aaPredicted RBP27.88■■■□□ 2.05
SFSWAP-205ENST00000537164 CDK11AQ9UQ88 783 aaPredicted RBP27.87■■■□□ 2.05
SFSWAP-205ENST00000537164 FYCO1Q9BQS8 1478 aa27.86■■■□□ 2.05
SFSWAP-205ENST00000537164 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
SFSWAP-205ENST00000537164 TROQ12816 1431 aaPredicted RBP27.82■■■□□ 2.04
SFSWAP-205ENST00000537164 CFAP74Q9C0B2 1584 aa27.82■■■□□ 2.04
SFSWAP-205ENST00000537164 KIF14Q15058 1648 aa27.78■■■□□ 2.04
SFSWAP-205ENST00000537164 CEP162Q5TB80 1403 aa27.78■■■□□ 2.04
SFSWAP-205ENST00000537164 FANCAO15360 1455 aa27.77■■■□□ 2.04
SFSWAP-205ENST00000537164 PLCH2O75038 1416 aa27.76■■■□□ 2.04
SFSWAP-205ENST00000537164 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
SFSWAP-205ENST00000537164 MYO5CQ9NQX4 1742 aa27.75■■■□□ 2.03
SFSWAP-205ENST00000537164 AKNAQ7Z591 1439 aa27.74■■■□□ 2.03
SFSWAP-205ENST00000537164 FRMPD1Q5SYB0 1578 aa27.73■■■□□ 2.03
SFSWAP-205ENST00000537164 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
SFSWAP-205ENST00000537164 RICTORQ6R327 1708 aa27.7■■■□□ 2.03
SFSWAP-205ENST00000537164 RAPGEF3O95398 923 aa27.68■■■□□ 2.02
SFSWAP-205ENST00000537164 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
SFSWAP-205ENST00000537164 DENND4BO75064 1496 aaPredicted RBP27.67■■■□□ 2.02
SFSWAP-205ENST00000537164 ADGRL1O94910 1474 aa27.63■■■□□ 2.01
SFSWAP-205ENST00000537164 CDC42BPBQ9Y5S2 1711 aa27.62■■■□□ 2.01
SFSWAP-205ENST00000537164 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
SFSWAP-205ENST00000537164 ZMYM4Q5VZL5 1548 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms