RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 NUP160Q12769 1436 aa18.51■□□□□ 0.55
CPSF7-217ENST00000537162 CUX1P39880 1505 aa18.51■□□□□ 0.55
CPSF7-217ENST00000537162 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
CPSF7-217ENST00000537162 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
CPSF7-217ENST00000537162 SOCS7O14512 581 aa18.44■□□□□ 0.54
CPSF7-217ENST00000537162 ADCY10Q96PN6 1610 aa18.44■□□□□ 0.54
CPSF7-217ENST00000537162 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-217ENST00000537162 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
CPSF7-217ENST00000537162 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
CPSF7-217ENST00000537162 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
CPSF7-217ENST00000537162 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
CPSF7-217ENST00000537162 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-217ENST00000537162 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
CPSF7-217ENST00000537162 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
CPSF7-217ENST00000537162 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CPSF7-217ENST00000537162 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
CPSF7-217ENST00000537162 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
CPSF7-217ENST00000537162 GLI2P10070 1586 aa18.17■□□□□ 0.5
CPSF7-217ENST00000537162 ASXL2Q76L83 1435 aa18.1■□□□□ 0.49
CPSF7-217ENST00000537162 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
CPSF7-217ENST00000537162 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
CPSF7-217ENST00000537162 KIF21BO75037 1637 aa18.05■□□□□ 0.48
CPSF7-217ENST00000537162 CUL7Q14999 1698 aa18.04■□□□□ 0.48
CPSF7-217ENST00000537162 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
CPSF7-217ENST00000537162 SPATA31D1Q6ZQQ2 1576 aa18.03■□□□□ 0.48
CPSF7-217ENST00000537162 ABCC2Q92887 1545 aa18.03■□□□□ 0.48
CPSF7-217ENST00000537162 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
CPSF7-217ENST00000537162 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
CPSF7-217ENST00000537162 CERKQ8TCT0 537 aa18■□□□□ 0.47
CPSF7-217ENST00000537162 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
CPSF7-217ENST00000537162 PTPRMP28827 1452 aa17.99■□□□□ 0.47
CPSF7-217ENST00000537162 TEX14Q8IWB6 1497 aa17.99■□□□□ 0.47
CPSF7-217ENST00000537162 PCF11O94913 1555 aaKnown RBP17.98■□□□□ 0.47
CPSF7-217ENST00000537162 PTPRGP23470 1445 aa17.96■□□□□ 0.47
CPSF7-217ENST00000537162 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
CPSF7-217ENST00000537162 KIAA0586Q9BVV6 1533 aa17.9■□□□□ 0.46
CPSF7-217ENST00000537162 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
CPSF7-217ENST00000537162 HSPA2P54652 639 aa17.87■□□□□ 0.45
CPSF7-217ENST00000537162 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
CPSF7-217ENST00000537162 ZCCHC11Q5TAX3 1644 aaKnown RBP17.83■□□□□ 0.44
CPSF7-217ENST00000537162 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
CPSF7-217ENST00000537162 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
CPSF7-217ENST00000537162 KDM5BQ9UGL1 1544 aa17.81■□□□□ 0.44
CPSF7-217ENST00000537162 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
CPSF7-217ENST00000537162 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
CPSF7-217ENST00000537162 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
CPSF7-217ENST00000537162 RIMS1Q86UR5 1692 aaKnown RBP17.73■□□□□ 0.43
CPSF7-217ENST00000537162 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
CPSF7-217ENST00000537162 CFAP43Q8NDM7 1665 aa17.72■□□□□ 0.43
CPSF7-217ENST00000537162 WDR7Q9Y4E6 1490 aa17.71■□□□□ 0.43
CPSF7-217ENST00000537162 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
CPSF7-217ENST00000537162 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
CPSF7-217ENST00000537162 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
CPSF7-217ENST00000537162 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
CPSF7-217ENST00000537162 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
CPSF7-217ENST00000537162 IGF1RP08069 1367 aa17.62■□□□□ 0.41
CPSF7-217ENST00000537162 ARID4BQ4LE39 1312 aaPredicted RBP17.6■□□□□ 0.41
CPSF7-217ENST00000537162 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
CPSF7-217ENST00000537162 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
CPSF7-217ENST00000537162 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
CPSF7-217ENST00000537162 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
CPSF7-217ENST00000537162 SIGLEC1Q9BZZ2 1709 aa17.51■□□□□ 0.39
CPSF7-217ENST00000537162 KIAA0556O60303 1618 aa17.48■□□□□ 0.39
CPSF7-217ENST00000537162 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
CPSF7-217ENST00000537162 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
CPSF7-217ENST00000537162 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
CPSF7-217ENST00000537162 PREX1Q8TCU6 1659 aa17.45■□□□□ 0.38
CPSF7-217ENST00000537162 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
CPSF7-217ENST00000537162 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
CPSF7-217ENST00000537162 TTC37Q6PGP7 1564 aa17.41■□□□□ 0.38
CPSF7-217ENST00000537162 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
CPSF7-217ENST00000537162 ABCA8O94911 1581 aa17.4■□□□□ 0.38
CPSF7-217ENST00000537162 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-217ENST00000537162 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
CPSF7-217ENST00000537162 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
CPSF7-217ENST00000537162 ABCA9Q8IUA7 1624 aa17.39■□□□□ 0.37
CPSF7-217ENST00000537162 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
CPSF7-217ENST00000537162 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
CPSF7-217ENST00000537162 MLECQ14165 292 aa17.36■□□□□ 0.37
CPSF7-217ENST00000537162 NEO1Q92859 1461 aa17.35■□□□□ 0.37
CPSF7-217ENST00000537162 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
CPSF7-217ENST00000537162 PTPRTO14522 1441 aa17.34■□□□□ 0.37
CPSF7-217ENST00000537162 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-217ENST00000537162 FANCAO15360 1455 aa17.33■□□□□ 0.37
CPSF7-217ENST00000537162 POGZQ7Z3K3 1410 aa17.32■□□□□ 0.36
CPSF7-217ENST00000537162 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
CPSF7-217ENST00000537162 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
CPSF7-217ENST00000537162 AKNAQ7Z591 1439 aa17.26■□□□□ 0.35
CPSF7-217ENST00000537162 ARHGEF12Q9NZN5 1544 aa17.26■□□□□ 0.35
CPSF7-217ENST00000537162 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
CPSF7-217ENST00000537162 ATP10BO94823 1461 aa17.24■□□□□ 0.35
CPSF7-217ENST00000537162 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
CPSF7-217ENST00000537162 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
CPSF7-217ENST00000537162 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
CPSF7-217ENST00000537162 HSPA1LP34931 641 aa17.22■□□□□ 0.35
CPSF7-217ENST00000537162 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.35
CPSF7-217ENST00000537162 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
CPSF7-217ENST00000537162 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
CPSF7-217ENST00000537162 HECW1Q76N89 1606 aa17.16■□□□□ 0.34
CPSF7-217ENST00000537162 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms