RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
UBE3B-207ENST00000537063 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
UBE3B-207ENST00000537063 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
UBE3B-207ENST00000537063 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
UBE3B-207ENST00000537063 FHAD1B1AJZ9 1412 aa14.13□□□□□ -0.15
UBE3B-207ENST00000537063 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.151e-6■■■■□ 25.4
UBE3B-207ENST00000537063 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-207ENST00000537063 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
UBE3B-207ENST00000537063 WDR62O43379 1518 aa14.09□□□□□ -0.15
UBE3B-207ENST00000537063 LRRC9Q6ZRR7 1453 aa14.08□□□□□ -0.16
UBE3B-207ENST00000537063 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
UBE3B-207ENST00000537063 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
UBE3B-207ENST00000537063 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
UBE3B-207ENST00000537063 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
UBE3B-207ENST00000537063 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
UBE3B-207ENST00000537063 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
UBE3B-207ENST00000537063 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
UBE3B-207ENST00000537063 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
UBE3B-207ENST00000537063 IFT140Q96RY7 1462 aa14.02□□□□□ -0.17
UBE3B-207ENST00000537063 FMN1Q68DA7 1419 aa14.01□□□□□ -0.17
UBE3B-207ENST00000537063 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
UBE3B-207ENST00000537063 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
UBE3B-207ENST00000537063 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
UBE3B-207ENST00000537063 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
UBE3B-207ENST00000537063 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
UBE3B-207ENST00000537063 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
UBE3B-207ENST00000537063 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
UBE3B-207ENST00000537063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE3B-207ENST00000537063 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-207ENST00000537063 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
UBE3B-207ENST00000537063 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
UBE3B-207ENST00000537063 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
UBE3B-207ENST00000537063 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
UBE3B-207ENST00000537063 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
UBE3B-207ENST00000537063 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
UBE3B-207ENST00000537063 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
UBE3B-207ENST00000537063 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
UBE3B-207ENST00000537063 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-207ENST00000537063 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
UBE3B-207ENST00000537063 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
UBE3B-207ENST00000537063 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
UBE3B-207ENST00000537063 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.19
UBE3B-207ENST00000537063 MAGI3Q5TCQ9 1506 aa13.83□□□□□ -0.2
UBE3B-207ENST00000537063 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
UBE3B-207ENST00000537063 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
UBE3B-207ENST00000537063 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
UBE3B-207ENST00000537063 NCOA2Q15596 1464 aa13.81□□□□□ -0.2
UBE3B-207ENST00000537063 DISP1Q96F81 1524 aa13.81□□□□□ -0.2
UBE3B-207ENST00000537063 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-207ENST00000537063 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
UBE3B-207ENST00000537063 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
UBE3B-207ENST00000537063 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
UBE3B-207ENST00000537063 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
UBE3B-207ENST00000537063 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
UBE3B-207ENST00000537063 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.21
UBE3B-207ENST00000537063 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
UBE3B-207ENST00000537063 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
UBE3B-207ENST00000537063 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-207ENST00000537063 RAPGEF6Q8TEU7 1601 aa13.74□□□□□ -0.21
UBE3B-207ENST00000537063 NUP160Q12769 1436 aa13.74□□□□□ -0.21
UBE3B-207ENST00000537063 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
UBE3B-207ENST00000537063 FAM50AQ14320 339 aaKnown RBP13.72□□□□□ -0.21
UBE3B-207ENST00000537063 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
UBE3B-207ENST00000537063 ITGAEP38570 1179 aa13.71□□□□□ -0.21
UBE3B-207ENST00000537063 PTPRKQ15262 1439 aa13.71□□□□□ -0.21
UBE3B-207ENST00000537063 GCC2Q8IWJ2 1684 aa13.71□□□□□ -0.22
UBE3B-207ENST00000537063 NUP153P49790 1475 aaKnown RBP13.71□□□□□ -0.22
UBE3B-207ENST00000537063 MIA2Q96PC5 1412 aa13.69□□□□□ -0.22
UBE3B-207ENST00000537063 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
UBE3B-207ENST00000537063 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
UBE3B-207ENST00000537063 NAIPQ13075 1403 aa13.65□□□□□ -0.22
UBE3B-207ENST00000537063 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
UBE3B-207ENST00000537063 ABCA8O94911 1581 aa13.61□□□□□ -0.23
UBE3B-207ENST00000537063 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
UBE3B-207ENST00000537063 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-207ENST00000537063 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
UBE3B-207ENST00000537063 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
UBE3B-207ENST00000537063 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
UBE3B-207ENST00000537063 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
UBE3B-207ENST00000537063 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-207ENST00000537063 CHD1O14646 1710 aa13.57□□□□□ -0.24
UBE3B-207ENST00000537063 SHROOM2Q13796 1616 aa13.56□□□□□ -0.24
UBE3B-207ENST00000537063 KDM6BO15054 1643 aa13.56□□□□□ -0.24
UBE3B-207ENST00000537063 CROCC2H7BZ55 1655 aa13.55□□□□□ -0.24
UBE3B-207ENST00000537063 ROCK1Q13464 1354 aa13.55□□□□□ -0.24
UBE3B-207ENST00000537063 KIF14Q15058 1648 aa13.55□□□□□ -0.24
UBE3B-207ENST00000537063 DAPK1P53355 1430 aa13.54□□□□□ -0.24
UBE3B-207ENST00000537063 JPH4Q96JJ6 628 aa13.53□□□□□ -0.24
UBE3B-207ENST00000537063 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-207ENST00000537063 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
UBE3B-207ENST00000537063 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
UBE3B-207ENST00000537063 PRG4Q92954 1404 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-207ENST00000537063 ABCC5O15440 1437 aa13.51□□□□□ -0.25
UBE3B-207ENST00000537063 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-207ENST00000537063 CDC42BPAQ5VT25 1732 aa13.51□□□□□ -0.25
UBE3B-207ENST00000537063 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
UBE3B-207ENST00000537063 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
UBE3B-207ENST00000537063 MIER1Q8N108 512 aa13.5□□□□□ -0.25
UBE3B-207ENST00000537063 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
UBE3B-207ENST00000537063 ABCC10Q5T3U5 1492 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms