RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
SMG6-203ENST00000536871 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■■□ 23.5
SMG6-203ENST00000536871 RRBP1Q9P2E9 1410 aaKnown RBP20.43■□□□□ 0.86
SMG6-203ENST00000536871 WDR62O43379 1518 aa20.43■□□□□ 0.86
SMG6-203ENST00000536871 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
SMG6-203ENST00000536871 TIAM1Q13009 1591 aa20.42■□□□□ 0.86
SMG6-203ENST00000536871 FMN1Q68DA7 1419 aa20.4■□□□□ 0.86
SMG6-203ENST00000536871 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
SMG6-203ENST00000536871 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
SMG6-203ENST00000536871 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
SMG6-203ENST00000536871 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
SMG6-203ENST00000536871 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
SMG6-203ENST00000536871 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
SMG6-203ENST00000536871 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
SMG6-203ENST00000536871 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.85
SMG6-203ENST00000536871 SAMD9Q5K651 1589 aa20.33■□□□□ 0.84
SMG6-203ENST00000536871 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
SMG6-203ENST00000536871 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
SMG6-203ENST00000536871 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
SMG6-203ENST00000536871 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
SMG6-203ENST00000536871 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
SMG6-203ENST00000536871 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
SMG6-203ENST00000536871 THOC2Q8NI27 1593 aaKnown RBP20.27■□□□□ 0.84
SMG6-203ENST00000536871 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
SMG6-203ENST00000536871 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
SMG6-203ENST00000536871 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
SMG6-203ENST00000536871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMG6-203ENST00000536871 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
SMG6-203ENST00000536871 CCDC18Q5T9S5 1454 aa20.15■□□□□ 0.82
SMG6-203ENST00000536871 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
SMG6-203ENST00000536871 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
SMG6-203ENST00000536871 KIAA0586Q9BVV6 1533 aa20.14■□□□□ 0.81
SMG6-203ENST00000536871 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
SMG6-203ENST00000536871 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
SMG6-203ENST00000536871 PHLDB1Q86UU1 1377 aa20.11■□□□□ 0.81
SMG6-203ENST00000536871 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
SMG6-203ENST00000536871 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
SMG6-203ENST00000536871 HECW1Q76N89 1606 aa20.08■□□□□ 0.8
SMG6-203ENST00000536871 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
SMG6-203ENST00000536871 DHX57Q6P158 1386 aaKnown RBP20.07■□□□□ 0.8
SMG6-203ENST00000536871 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
SMG6-203ENST00000536871 SETD5Q9C0A6 1442 aa20.01■□□□□ 0.79
SMG6-203ENST00000536871 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
SMG6-203ENST00000536871 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
SMG6-203ENST00000536871 MYT1Q01538 1121 aa20■□□□□ 0.79
SMG6-203ENST00000536871 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
SMG6-203ENST00000536871 KIAA0556O60303 1618 aa19.98■□□□□ 0.79
SMG6-203ENST00000536871 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
SMG6-203ENST00000536871 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
SMG6-203ENST00000536871 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
SMG6-203ENST00000536871 RAB3GAP2Q9H2M9 1393 aa19.96■□□□□ 0.79
SMG6-203ENST00000536871 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
SMG6-203ENST00000536871 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
SMG6-203ENST00000536871 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
SMG6-203ENST00000536871 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
SMG6-203ENST00000536871 DISP1Q96F81 1524 aa19.94■□□□□ 0.78
SMG6-203ENST00000536871 NUP160Q12769 1436 aa19.94■□□□□ 0.78
SMG6-203ENST00000536871 ITGAEP38570 1179 aa19.93■□□□□ 0.78
SMG6-203ENST00000536871 CARMIL2Q6F5E8 1435 aa19.91■□□□□ 0.78
SMG6-203ENST00000536871 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
SMG6-203ENST00000536871 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
SMG6-203ENST00000536871 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
SMG6-203ENST00000536871 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
SMG6-203ENST00000536871 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
SMG6-203ENST00000536871 ACIN1Q9UKV3 1341 aaKnown RBP19.86■□□□□ 0.77
SMG6-203ENST00000536871 RAPGEF6Q8TEU7 1601 aa19.85■□□□□ 0.77
SMG6-203ENST00000536871 MAGI3Q5TCQ9 1506 aa19.83■□□□□ 0.77
SMG6-203ENST00000536871 TIMELESSQ9UNS1 1208 aa19.83■□□□□ 0.76
SMG6-203ENST00000536871 HFM1A2PYH4 1435 aa19.83■□□□□ 0.76
SMG6-203ENST00000536871 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
SMG6-203ENST00000536871 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
SMG6-203ENST00000536871 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
SMG6-203ENST00000536871 JPH4Q96JJ6 628 aa19.79■□□□□ 0.76
SMG6-203ENST00000536871 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
SMG6-203ENST00000536871 FBLN2P98095 1184 aa19.77■□□□□ 0.76
SMG6-203ENST00000536871 MAPKBP1O60336 1514 aa19.77■□□□□ 0.76
SMG6-203ENST00000536871 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
SMG6-203ENST00000536871 TROQ12816 1431 aaPredicted RBP19.72■□□□□ 0.75
SMG6-203ENST00000536871 NAIPQ13075 1403 aa19.71■□□□□ 0.75
SMG6-203ENST00000536871 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
SMG6-203ENST00000536871 ABCA8O94911 1581 aa19.66■□□□□ 0.74
SMG6-203ENST00000536871 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
SMG6-203ENST00000536871 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
SMG6-203ENST00000536871 PLB1Q6P1J6 1458 aa19.65■□□□□ 0.74
SMG6-203ENST00000536871 GCC2Q8IWJ2 1684 aa19.64■□□□□ 0.74
SMG6-203ENST00000536871 ITSN2Q9NZM3 1697 aa19.63■□□□□ 0.73
SMG6-203ENST00000536871 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
SMG6-203ENST00000536871 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
SMG6-203ENST00000536871 PTPRGP23470 1445 aa19.59■□□□□ 0.73
SMG6-203ENST00000536871 DAPK1P53355 1430 aa19.59■□□□□ 0.73
SMG6-203ENST00000536871 PLEKHD1A6NEE1 506 aa19.58■□□□□ 0.73
SMG6-203ENST00000536871 SHROOM2Q13796 1616 aa19.56■□□□□ 0.72
SMG6-203ENST00000536871 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
SMG6-203ENST00000536871 ATP10BO94823 1461 aa19.54■□□□□ 0.72
SMG6-203ENST00000536871 KIF14Q15058 1648 aa19.54■□□□□ 0.72
SMG6-203ENST00000536871 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
SMG6-203ENST00000536871 CHD1O14646 1710 aa19.54■□□□□ 0.72
SMG6-203ENST00000536871 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
SMG6-203ENST00000536871 ABCC5O15440 1437 aa19.54■□□□□ 0.72
SMG6-203ENST00000536871 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms