RNA–Protein interactions for RNA: ENST00000536528.5

LDHA-214, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 516 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-214ENST00000536528 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
LDHA-214ENST00000536528 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
LDHA-214ENST00000536528 KIF13AQ9H1H9 1805 aa11.97□□□□□ -0.49
LDHA-214ENST00000536528 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
LDHA-214ENST00000536528 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
LDHA-214ENST00000536528 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
LDHA-214ENST00000536528 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
LDHA-214ENST00000536528 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
LDHA-214ENST00000536528 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
LDHA-214ENST00000536528 IGF1RP08069 1367 aa11.84□□□□□ -0.51
LDHA-214ENST00000536528 SHROOM2Q13796 1616 aa11.83□□□□□ -0.52
LDHA-214ENST00000536528 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
LDHA-214ENST00000536528 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
LDHA-214ENST00000536528 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
LDHA-214ENST00000536528 KDM6BO15054 1643 aa11.8□□□□□ -0.52
LDHA-214ENST00000536528 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
LDHA-214ENST00000536528 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
LDHA-214ENST00000536528 NUP160Q12769 1436 aa11.78□□□□□ -0.52
LDHA-214ENST00000536528 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
LDHA-214ENST00000536528 CUL7Q14999 1698 aa11.76□□□□□ -0.53
LDHA-214ENST00000536528 FAM69CQ0P6D2 419 aa11.74□□□□□ -0.53
LDHA-214ENST00000536528 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
LDHA-214ENST00000536528 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
LDHA-214ENST00000536528 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
LDHA-214ENST00000536528 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.53
LDHA-214ENST00000536528 MAPKBP1O60336 1514 aa11.71□□□□□ -0.53
LDHA-214ENST00000536528 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
LDHA-214ENST00000536528 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
LDHA-214ENST00000536528 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
LDHA-214ENST00000536528 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
LDHA-214ENST00000536528 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
LDHA-214ENST00000536528 EEA1Q15075 1411 aa11.65□□□□□ -0.54
LDHA-214ENST00000536528 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
LDHA-214ENST00000536528 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
LDHA-214ENST00000536528 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
LDHA-214ENST00000536528 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
LDHA-214ENST00000536528 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
LDHA-214ENST00000536528 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
LDHA-214ENST00000536528 PPRC1Q5VV67 1664 aaKnown RBP11.6□□□□□ -0.55
LDHA-214ENST00000536528 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
LDHA-214ENST00000536528 KIF21BO75037 1637 aa11.59□□□□□ -0.55
LDHA-214ENST00000536528 CTTNBP2Q8WZ74 1663 aa11.58□□□□□ -0.56
LDHA-214ENST00000536528 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
LDHA-214ENST00000536528 IQGAP2Q13576 1575 aa11.56□□□□□ -0.56
LDHA-214ENST00000536528 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
LDHA-214ENST00000536528 FAM9AQ8IZU1 332 aaPredicted RBP11.54□□□□□ -0.56
LDHA-214ENST00000536528 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
LDHA-214ENST00000536528 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
LDHA-214ENST00000536528 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
LDHA-214ENST00000536528 GLI2P10070 1586 aa11.5□□□□□ -0.57
LDHA-214ENST00000536528 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
LDHA-214ENST00000536528 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
LDHA-214ENST00000536528 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
LDHA-214ENST00000536528 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
LDHA-214ENST00000536528 SAMD9Q5K651 1589 aa11.47□□□□□ -0.57
LDHA-214ENST00000536528 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
LDHA-214ENST00000536528 PTPRGP23470 1445 aa11.46□□□□□ -0.57
LDHA-214ENST00000536528 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
LDHA-214ENST00000536528 COL17A1Q9UMD9 1497 aaPredicted RBP11.45□□□□□ -0.58
LDHA-214ENST00000536528 TEX14Q8IWB6 1497 aa11.44□□□□□ -0.58
LDHA-214ENST00000536528 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
LDHA-214ENST00000536528 CARMIL2Q6F5E8 1435 aa11.42□□□□□ -0.58
LDHA-214ENST00000536528 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
LDHA-214ENST00000536528 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
LDHA-214ENST00000536528 FBXO41Q8TF61 875 aa11.41□□□□□ -0.58
LDHA-214ENST00000536528 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
LDHA-214ENST00000536528 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
LDHA-214ENST00000536528 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
LDHA-214ENST00000536528 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
LDHA-214ENST00000536528 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
LDHA-214ENST00000536528 ABCA8O94911 1581 aa11.37□□□□□ -0.59
LDHA-214ENST00000536528 EFCAB5A4FU69 1503 aa11.36□□□□□ -0.59
LDHA-214ENST00000536528 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
LDHA-214ENST00000536528 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
LDHA-214ENST00000536528 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
LDHA-214ENST00000536528 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
LDHA-214ENST00000536528 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
LDHA-214ENST00000536528 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
LDHA-214ENST00000536528 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
LDHA-214ENST00000536528 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
LDHA-214ENST00000536528 P3H3Q8IVL6 736 aa11.31□□□□□ -0.6
LDHA-214ENST00000536528 RAPGEF6Q8TEU7 1601 aa11.28□□□□□ -0.6
LDHA-214ENST00000536528 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
LDHA-214ENST00000536528 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.6
LDHA-214ENST00000536528 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.61
LDHA-214ENST00000536528 MAGI3Q5TCQ9 1506 aa11.27□□□□□ -0.61
LDHA-214ENST00000536528 PCF11O94913 1555 aaKnown RBP11.27□□□□□ -0.61
LDHA-214ENST00000536528 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
LDHA-214ENST00000536528 ATP10BO94823 1461 aa11.26□□□□□ -0.61
LDHA-214ENST00000536528 PTPRMP28827 1452 aa11.26□□□□□ -0.61
LDHA-214ENST00000536528 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
LDHA-214ENST00000536528 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
LDHA-214ENST00000536528 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
LDHA-214ENST00000536528 CLIP1P30622 1438 aa11.26□□□□□ -0.61
LDHA-214ENST00000536528 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
LDHA-214ENST00000536528 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
LDHA-214ENST00000536528 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
LDHA-214ENST00000536528 FMN1Q68DA7 1419 aa11.22□□□□□ -0.61
LDHA-214ENST00000536528 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
LDHA-214ENST00000536528 CASKIN1Q8WXD9 1431 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms