RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 KDM6BO15054 1643 aa9.67□□□□□ -0.86
CHD4-205ENST00000536301 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
CHD4-205ENST00000536301 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
CHD4-205ENST00000536301 JPH4Q96JJ6 628 aa9.66□□□□□ -0.86
CHD4-205ENST00000536301 BIVM-ERCC5R4GMW8 1640 aa9.65□□□□□ -0.86
CHD4-205ENST00000536301 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
CHD4-205ENST00000536301 RUSC2Q8N2Y8 1516 aa9.65□□□□□ -0.86
CHD4-205ENST00000536301 ERICH3Q5RHP9 1530 aa9.64□□□□□ -0.87
CHD4-205ENST00000536301 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
CHD4-205ENST00000536301 PPRC1Q5VV67 1664 aaKnown RBP9.59□□□□□ -0.87
CHD4-205ENST00000536301 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD4-205ENST00000536301 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
CHD4-205ENST00000536301 COL17A1Q9UMD9 1497 aaPredicted RBP9.55□□□□□ -0.88
CHD4-205ENST00000536301 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
CHD4-205ENST00000536301 TTBK1Q5TCY1 1321 aaPredicted RBP9.54□□□□□ -0.88
CHD4-205ENST00000536301 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
CHD4-205ENST00000536301 KIAA0586Q9BVV6 1533 aa9.52□□□□□ -0.88
CHD4-205ENST00000536301 CUL7Q14999 1698 aa9.51□□□□□ -0.89
CHD4-205ENST00000536301 ASXL2Q76L83 1435 aa9.5□□□□□ -0.89
CHD4-205ENST00000536301 GLI2P10070 1586 aa9.5□□□□□ -0.89
CHD4-205ENST00000536301 PTPRGP23470 1445 aa9.49□□□□□ -0.89
CHD4-205ENST00000536301 ABCC2Q92887 1545 aa9.49□□□□□ -0.89
CHD4-205ENST00000536301 IGF1RP08069 1367 aa9.49□□□□□ -0.89
CHD4-205ENST00000536301 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
CHD4-205ENST00000536301 MAP3K4Q9Y6R4 1608 aa9.45□□□□□ -0.9
CHD4-205ENST00000536301 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
CHD4-205ENST00000536301 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
CHD4-205ENST00000536301 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
CHD4-205ENST00000536301 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
CHD4-205ENST00000536301 DISP1Q96F81 1524 aa9.41□□□□□ -0.9
CHD4-205ENST00000536301 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
CHD4-205ENST00000536301 KDM5BQ9UGL1 1544 aa9.41□□□□□ -0.9
CHD4-205ENST00000536301 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
CHD4-205ENST00000536301 IQGAP2Q13576 1575 aa9.4□□□□□ -0.9
CHD4-205ENST00000536301 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
CHD4-205ENST00000536301 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
CHD4-205ENST00000536301 KIF21BO75037 1637 aa9.38□□□□□ -0.91
CHD4-205ENST00000536301 TEX14Q8IWB6 1497 aa9.38□□□□□ -0.91
CHD4-205ENST00000536301 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
CHD4-205ENST00000536301 KIAA0556O60303 1618 aa9.34□□□□□ -0.91
CHD4-205ENST00000536301 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
CHD4-205ENST00000536301 UGGT2Q9NYU1 1516 aa9.34□□□□□ -0.91
CHD4-205ENST00000536301 MAGI3Q5TCQ9 1506 aa9.32□□□□□ -0.92
CHD4-205ENST00000536301 CFAP43Q8NDM7 1665 aa9.32□□□□□ -0.92
CHD4-205ENST00000536301 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
CHD4-205ENST00000536301 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
CHD4-205ENST00000536301 ADAMTSL3P82987 1691 aa9.3□□□□□ -0.92
CHD4-205ENST00000536301 PTPRMP28827 1452 aa9.29□□□□□ -0.92
CHD4-205ENST00000536301 ABCA8O94911 1581 aa9.29□□□□□ -0.92
CHD4-205ENST00000536301 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
CHD4-205ENST00000536301 ARID3CA6NKF2 412 aa9.26□□□□□ -0.93
CHD4-205ENST00000536301 MADDQ8WXG6 1647 aa9.26□□□□□ -0.93
CHD4-205ENST00000536301 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
CHD4-205ENST00000536301 ARAP3Q8WWN8 1544 aa9.25□□□□□ -0.93
CHD4-205ENST00000536301 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
CHD4-205ENST00000536301 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
CHD4-205ENST00000536301 CTTNBP2Q8WZ74 1663 aa9.24□□□□□ -0.93
CHD4-205ENST00000536301 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
CHD4-205ENST00000536301 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
CHD4-205ENST00000536301 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
CHD4-205ENST00000536301 HSPA2P54652 639 aa9.22□□□□□ -0.93
CHD4-205ENST00000536301 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
CHD4-205ENST00000536301 ATP10BO94823 1461 aa9.21□□□□□ -0.94
CHD4-205ENST00000536301 ABCA9Q8IUA7 1624 aa9.2□□□□□ -0.94
CHD4-205ENST00000536301 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
CHD4-205ENST00000536301 PLPPR3Q6T4P5 718 aa9.19□□□□□ -0.94
CHD4-205ENST00000536301 ARID4BQ4LE39 1312 aaPredicted RBP9.18□□□□□ -0.94
CHD4-205ENST00000536301 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
CHD4-205ENST00000536301 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
CHD4-205ENST00000536301 CERKQ8TCT0 537 aa9.16□□□□□ -0.94
CHD4-205ENST00000536301 ARHGEF40Q8TER5 1519 aa9.15□□□□□ -0.94
CHD4-205ENST00000536301 RICTORQ6R327 1708 aa9.15□□□□□ -0.94
CHD4-205ENST00000536301 NEO1Q92859 1461 aa9.15□□□□□ -0.95
CHD4-205ENST00000536301 DISP3Q9P2K9 1392 aa9.13□□□□□ -0.95
CHD4-205ENST00000536301 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
CHD4-205ENST00000536301 SOCS7O14512 581 aa9.12□□□□□ -0.95
CHD4-205ENST00000536301 PRXQ9BXM0 1461 aa9.12□□□□□ -0.95
CHD4-205ENST00000536301 YEATS2Q9ULM3 1422 aa9.12□□□□□ -0.95
CHD4-205ENST00000536301 RAPGEF6Q8TEU7 1601 aa9.12□□□□□ -0.95
CHD4-205ENST00000536301 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
CHD4-205ENST00000536301 FER1L4A9Z1Z3 1794 aa9.1□□□□□ -0.95
CHD4-205ENST00000536301 MLECQ14165 292 aa9.1□□□□□ -0.95
CHD4-205ENST00000536301 NUP153P49790 1475 aaKnown RBP9.09□□□□□ -0.95
CHD4-205ENST00000536301 SAMD9Q5K651 1589 aa9.09□□□□□ -0.95
CHD4-205ENST00000536301 FHOD3Q2V2M9 1422 aa9.09□□□□□ -0.95
CHD4-205ENST00000536301 AKNAQ7Z591 1439 aa9.09□□□□□ -0.95
CHD4-205ENST00000536301 STRCQ7RTU9 1775 aa9.09□□□□□ -0.95
CHD4-205ENST00000536301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.08□□□□□ -0.96
CHD4-205ENST00000536301 HNRNPUL2Q1KMD3 747 aaKnown RBP9.08□□□□□ -0.96
CHD4-205ENST00000536301 TTC37Q6PGP7 1564 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 ZMYM4Q5VZL5 1548 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 ZFYVE16Q7Z3T8 1539 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 CEBPAP49715 358 aaPredicted RBP9.07□□□□□ -0.96
CHD4-205ENST00000536301 FANCAO15360 1455 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
CHD4-205ENST00000536301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD4-205ENST00000536301 PREX1Q8TCU6 1659 aa9.05□□□□□ -0.96
CHD4-205ENST00000536301 EFCAB5A4FU69 1503 aa9.05□□□□□ -0.96
CHD4-205ENST00000536301 ARHGEF12Q9NZN5 1544 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms