RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
CDCA3-206ENST00000536241 NUP160Q12769 1436 aa18.53■□□□□ 0.56
CDCA3-206ENST00000536241 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
CDCA3-206ENST00000536241 KIAA0586Q9BVV6 1533 aa18.5■□□□□ 0.55
CDCA3-206ENST00000536241 JPH4Q96JJ6 628 aa18.48■□□□□ 0.55
CDCA3-206ENST00000536241 CTTNBP2Q8WZ74 1663 aa18.48■□□□□ 0.55
CDCA3-206ENST00000536241 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
CDCA3-206ENST00000536241 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
CDCA3-206ENST00000536241 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
CDCA3-206ENST00000536241 CLIP1P30622 1438 aa18.42■□□□□ 0.54
CDCA3-206ENST00000536241 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
CDCA3-206ENST00000536241 UGGT2Q9NYU1 1516 aa18.36■□□□□ 0.53
CDCA3-206ENST00000536241 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
CDCA3-206ENST00000536241 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
CDCA3-206ENST00000536241 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
CDCA3-206ENST00000536241 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
CDCA3-206ENST00000536241 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
CDCA3-206ENST00000536241 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
CDCA3-206ENST00000536241 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
CDCA3-206ENST00000536241 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
CDCA3-206ENST00000536241 EFCAB5A4FU69 1503 aa18.28■□□□□ 0.52
CDCA3-206ENST00000536241 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
CDCA3-206ENST00000536241 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
CDCA3-206ENST00000536241 KIAA0556O60303 1618 aa18.24■□□□□ 0.51
CDCA3-206ENST00000536241 PTPRGP23470 1445 aa18.19■□□□□ 0.5
CDCA3-206ENST00000536241 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
CDCA3-206ENST00000536241 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
CDCA3-206ENST00000536241 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
CDCA3-206ENST00000536241 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
CDCA3-206ENST00000536241 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
CDCA3-206ENST00000536241 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.49
CDCA3-206ENST00000536241 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.49
CDCA3-206ENST00000536241 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
CDCA3-206ENST00000536241 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
CDCA3-206ENST00000536241 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
CDCA3-206ENST00000536241 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
CDCA3-206ENST00000536241 APLP2Q06481 763 aa18.07■□□□□ 0.48
CDCA3-206ENST00000536241 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
CDCA3-206ENST00000536241 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
CDCA3-206ENST00000536241 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
CDCA3-206ENST00000536241 ABCA8O94911 1581 aa18.03■□□□□ 0.48
CDCA3-206ENST00000536241 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
CDCA3-206ENST00000536241 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
CDCA3-206ENST00000536241 FYCO1Q9BQS8 1478 aa18.02■□□□□ 0.48
CDCA3-206ENST00000536241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
CDCA3-206ENST00000536241 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
CDCA3-206ENST00000536241 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
CDCA3-206ENST00000536241 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
CDCA3-206ENST00000536241 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
CDCA3-206ENST00000536241 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
CDCA3-206ENST00000536241 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
CDCA3-206ENST00000536241 UHRF1BP1LA0JNW5 1464 aa17.96■□□□□ 0.47
CDCA3-206ENST00000536241 ATP10BO94823 1461 aa17.96■□□□□ 0.46
CDCA3-206ENST00000536241 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
CDCA3-206ENST00000536241 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
CDCA3-206ENST00000536241 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDCA3-206ENST00000536241 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
CDCA3-206ENST00000536241 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
CDCA3-206ENST00000536241 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
CDCA3-206ENST00000536241 MAP3K1Q13233 1512 aa17.91■□□□□ 0.46
CDCA3-206ENST00000536241 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
CDCA3-206ENST00000536241 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
CDCA3-206ENST00000536241 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.45
CDCA3-206ENST00000536241 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
CDCA3-206ENST00000536241 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
CDCA3-206ENST00000536241 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
CDCA3-206ENST00000536241 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
CDCA3-206ENST00000536241 KCNH8Q96L42 1107 aa17.83■□□□□ 0.45
CDCA3-206ENST00000536241 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.44
CDCA3-206ENST00000536241 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
CDCA3-206ENST00000536241 ASXL2Q76L83 1435 aa17.77■□□□□ 0.44
CDCA3-206ENST00000536241 EHBP1L1Q8N3D4 1523 aa17.76■□□□□ 0.43
CDCA3-206ENST00000536241 WDR7Q9Y4E6 1490 aa17.72■□□□□ 0.43
CDCA3-206ENST00000536241 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
CDCA3-206ENST00000536241 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
CDCA3-206ENST00000536241 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
CDCA3-206ENST00000536241 KIF14Q15058 1648 aa17.69■□□□□ 0.42
CDCA3-206ENST00000536241 MAPKBP1O60336 1514 aa17.68■□□□□ 0.42
CDCA3-206ENST00000536241 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
CDCA3-206ENST00000536241 ABCC10Q5T3U5 1492 aa17.66■□□□□ 0.42
CDCA3-206ENST00000536241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDCA3-206ENST00000536241 FAM69CQ0P6D2 419 aa17.64■□□□□ 0.41
CDCA3-206ENST00000536241 GPATCH8Q9UKJ3 1502 aaKnown RBP17.63■□□□□ 0.41
CDCA3-206ENST00000536241 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
CDCA3-206ENST00000536241 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
CDCA3-206ENST00000536241 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
CDCA3-206ENST00000536241 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
CDCA3-206ENST00000536241 TTC37Q6PGP7 1564 aa17.59■□□□□ 0.41
CDCA3-206ENST00000536241 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.41
CDCA3-206ENST00000536241 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
CDCA3-206ENST00000536241 PLCH2O75038 1416 aa17.57■□□□□ 0.4
CDCA3-206ENST00000536241 CD109Q6YHK3 1445 aa17.57■□□□□ 0.4
CDCA3-206ENST00000536241 FGD6Q6ZV73 1430 aa17.57■□□□□ 0.4
CDCA3-206ENST00000536241 ABCA9Q8IUA7 1624 aa17.57■□□□□ 0.4
CDCA3-206ENST00000536241 CDC42BPAQ5VT25 1732 aa17.56■□□□□ 0.4
CDCA3-206ENST00000536241 MIA2Q96PC5 1412 aa17.56■□□□□ 0.4
CDCA3-206ENST00000536241 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
CDCA3-206ENST00000536241 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
CDCA3-206ENST00000536241 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
CDCA3-206ENST00000536241 GLI2P10070 1586 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms