RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.05
CHD4-204ENST00000535810 NUP160Q12769 1436 aa15.35■□□□□ 0.05
CHD4-204ENST00000535810 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
CHD4-204ENST00000535810 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
CHD4-204ENST00000535810 IGF1RP08069 1367 aa15.27■□□□□ 0.04
CHD4-204ENST00000535810 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
CHD4-204ENST00000535810 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
CHD4-204ENST00000535810 KCNA4P22459 653 aa15.24■□□□□ 0.03
CHD4-204ENST00000535810 CUL7Q14999 1698 aa15.24■□□□□ 0.03
CHD4-204ENST00000535810 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
CHD4-204ENST00000535810 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
CHD4-204ENST00000535810 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
CHD4-204ENST00000535810 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
CHD4-204ENST00000535810 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
CHD4-204ENST00000535810 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
CHD4-204ENST00000535810 MSH5O43196 834 aa15.13■□□□□ 0.01
CHD4-204ENST00000535810 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
CHD4-204ENST00000535810 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
CHD4-204ENST00000535810 IQGAP2Q13576 1575 aa15.03■□□□□ -0
CHD4-204ENST00000535810 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
CHD4-204ENST00000535810 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
CHD4-204ENST00000535810 CARMIL2Q6F5E8 1435 aa14.97□□□□□ -0.01
CHD4-204ENST00000535810 DISP1Q96F81 1524 aa14.96□□□□□ -0.02
CHD4-204ENST00000535810 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.02
CHD4-204ENST00000535810 PTPRGP23470 1445 aa14.95□□□□□ -0.02
CHD4-204ENST00000535810 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
CHD4-204ENST00000535810 TNIKQ9UKE5 1360 aa14.95□□□□□ -0.02
CHD4-204ENST00000535810 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
CHD4-204ENST00000535810 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
CHD4-204ENST00000535810 KIAA0556O60303 1618 aa14.91□□□□□ -0.02
CHD4-204ENST00000535810 TTBK1Q5TCY1 1321 aaPredicted RBP14.9□□□□□ -0.02
CHD4-204ENST00000535810 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHD4-204ENST00000535810 FAM69CQ0P6D2 419 aa14.89□□□□□ -0.03
CHD4-204ENST00000535810 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
CHD4-204ENST00000535810 EEA1Q15075 1411 aa14.89□□□□□ -0.03
CHD4-204ENST00000535810 KIF13AQ9H1H9 1805 aa14.87□□□□□ -0.03
CHD4-204ENST00000535810 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
CHD4-204ENST00000535810 UHRF1BP1LA0JNW5 1464 aa14.86□□□□□ -0.03
CHD4-204ENST00000535810 ABCC10Q5T3U5 1492 aa14.86□□□□□ -0.03
CHD4-204ENST00000535810 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
CHD4-204ENST00000535810 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
CHD4-204ENST00000535810 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
CHD4-204ENST00000535810 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
CHD4-204ENST00000535810 FAM9AQ8IZU1 332 aaPredicted RBP14.79□□□□□ -0.04
CHD4-204ENST00000535810 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
CHD4-204ENST00000535810 KDM5BQ9UGL1 1544 aa14.79□□□□□ -0.04
CHD4-204ENST00000535810 ASXL2Q76L83 1435 aa14.78□□□□□ -0.04
CHD4-204ENST00000535810 PLB1Q6P1J6 1458 aa14.77□□□□□ -0.04
CHD4-204ENST00000535810 KIF21BO75037 1637 aa14.77□□□□□ -0.05
CHD4-204ENST00000535810 ABCA8O94911 1581 aa14.76□□□□□ -0.05
CHD4-204ENST00000535810 ZCCHC11Q5TAX3 1644 aaKnown RBP14.75□□□□□ -0.05
CHD4-204ENST00000535810 SAMD9Q5K651 1589 aa14.75□□□□□ -0.05
CHD4-204ENST00000535810 KDM6BO15054 1643 aa14.73□□□□□ -0.05
CHD4-204ENST00000535810 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
CHD4-204ENST00000535810 GLI2P10070 1586 aa14.71□□□□□ -0.05
CHD4-204ENST00000535810 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
CHD4-204ENST00000535810 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
CHD4-204ENST00000535810 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
CHD4-204ENST00000535810 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
CHD4-204ENST00000535810 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
CHD4-204ENST00000535810 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
CHD4-204ENST00000535810 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
CHD4-204ENST00000535810 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
CHD4-204ENST00000535810 EFCAB5A4FU69 1503 aa14.65□□□□□ -0.06
CHD4-204ENST00000535810 PPRC1Q5VV67 1664 aaKnown RBP14.65□□□□□ -0.06
CHD4-204ENST00000535810 MAP3K4Q9Y6R4 1608 aa14.64□□□□□ -0.07
CHD4-204ENST00000535810 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
CHD4-204ENST00000535810 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
CHD4-204ENST00000535810 ATP10BO94823 1461 aa14.62□□□□□ -0.07
CHD4-204ENST00000535810 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
CHD4-204ENST00000535810 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
CHD4-204ENST00000535810 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
CHD4-204ENST00000535810 NUP153P49790 1475 aaKnown RBP14.6□□□□□ -0.07
CHD4-204ENST00000535810 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
CHD4-204ENST00000535810 HECW2Q9P2P5 1572 aa14.59□□□□□ -0.07
CHD4-204ENST00000535810 TEX14Q8IWB6 1497 aa14.57□□□□□ -0.08
CHD4-204ENST00000535810 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
CHD4-204ENST00000535810 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
CHD4-204ENST00000535810 CD109Q6YHK3 1445 aa14.55□□□□□ -0.08
CHD4-204ENST00000535810 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
CHD4-204ENST00000535810 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
CHD4-204ENST00000535810 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
CHD4-204ENST00000535810 MAGI3Q5TCQ9 1506 aa14.54□□□□□ -0.08
CHD4-204ENST00000535810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
CHD4-204ENST00000535810 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
CHD4-204ENST00000535810 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
CHD4-204ENST00000535810 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
CHD4-204ENST00000535810 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.09
CHD4-204ENST00000535810 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
CHD4-204ENST00000535810 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
CHD4-204ENST00000535810 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
CHD4-204ENST00000535810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHD4-204ENST00000535810 NEO1Q92859 1461 aa14.4□□□□□ -0.1
CHD4-204ENST00000535810 CLIP1P30622 1438 aa14.4□□□□□ -0.1
CHD4-204ENST00000535810 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
CHD4-204ENST00000535810 PHLDB1Q86UU1 1377 aa14.39□□□□□ -0.11
CHD4-204ENST00000535810 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
CHD4-204ENST00000535810 PCF11O94913 1555 aaKnown RBP14.39□□□□□ -0.11
CHD4-204ENST00000535810 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
CHD4-204ENST00000535810 LRRIQ1Q96JM4 1722 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms