RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 RUSC2Q8N2Y8 1516 aa39.74■■■■□ 3.95
VPS37B-203ENST00000535765 PRG4Q92954 1404 aaPredicted RBP39.68■■■■□ 3.94
VPS37B-203ENST00000535765 KIAA0586Q9BVV6 1533 aa39.65■■■■□ 3.94
VPS37B-203ENST00000535765 TRHP20396 242 aaPredicted RBP39.58■■■■□ 3.93
VPS37B-203ENST00000535765 RAPGEF2Q9Y4G8 1499 aa39.57■■■■□ 3.93
VPS37B-203ENST00000535765 PRXQ9BXM0 1461 aa39.42■■■■□ 3.9
VPS37B-203ENST00000535765 EEA1Q15075 1411 aa39.4■■■■□ 3.9
VPS37B-203ENST00000535765 CHIC1Q5VXU3 224 aa39.39■■■■□ 3.9
VPS37B-203ENST00000535765 IQGAP2Q13576 1575 aa39.38■■■■□ 3.89
VPS37B-203ENST00000535765 CSRNP3Q8WYN3 585 aa39.33■■■■□ 3.89
VPS37B-203ENST00000535765 CTTNBP2Q8WZ74 1663 aa39.26■■■■□ 3.88
VPS37B-203ENST00000535765 CARMIL2Q6F5E8 1435 aa39.25■■■■□ 3.87
VPS37B-203ENST00000535765 UGGT2Q9NYU1 1516 aa39.19■■■■□ 3.86
VPS37B-203ENST00000535765 PTPRGP23470 1445 aa39.17■■■■□ 3.86
VPS37B-203ENST00000535765 TTBK1Q5TCY1 1321 aaPredicted RBP39.16■■■■□ 3.86
VPS37B-203ENST00000535765 TNIKQ9UKE5 1360 aa39.14■■■■□ 3.86
VPS37B-203ENST00000535765 NPM1P06748 294 aaKnown RBP eCLIP39.14■■■■□ 3.86
VPS37B-203ENST00000535765 DISP1Q96F81 1524 aa39.1■■■■□ 3.85
VPS37B-203ENST00000535765 ADCY10Q96PN6 1610 aa39.04■■■■□ 3.84
VPS37B-203ENST00000535765 KIAA0556O60303 1618 aa39■■■■□ 3.83
VPS37B-203ENST00000535765 FAM9AQ8IZU1 332 aaPredicted RBP39■■■■□ 3.83
VPS37B-203ENST00000535765 KIF21BO75037 1637 aa38.98■■■■□ 3.83
VPS37B-203ENST00000535765 GOLGA3Q08378 1498 aa38.97■■■■□ 3.83
VPS37B-203ENST00000535765 MAPKBP1O60336 1514 aa38.89■■■■□ 3.82
VPS37B-203ENST00000535765 UACAQ9BZF9 1416 aa38.87■■■■□ 3.81
VPS37B-203ENST00000535765 UHRF1BP1LA0JNW5 1464 aa38.84■■■■□ 3.81
VPS37B-203ENST00000535765 ABCC2Q92887 1545 aa38.83■■■■□ 3.81
VPS37B-203ENST00000535765 FAM69CQ0P6D2 419 aa38.82■■■■□ 3.8
VPS37B-203ENST00000535765 ABCC10Q5T3U5 1492 aa38.8■■■■□ 3.8
VPS37B-203ENST00000535765 SAMD9Q5K651 1589 aa38.73■■■■□ 3.79
VPS37B-203ENST00000535765 KIF13AQ9H1H9 1805 aa38.73■■■■□ 3.79
VPS37B-203ENST00000535765 DIP2BQ9P265 1576 aa38.68■■■■□ 3.78
VPS37B-203ENST00000535765 P3H3Q8IVL6 736 aa38.66■■■■□ 3.78
VPS37B-203ENST00000535765 ASXL2Q76L83 1435 aa38.64■■■■□ 3.78
VPS37B-203ENST00000535765 PLB1Q6P1J6 1458 aa38.64■■■■□ 3.78
VPS37B-203ENST00000535765 KDM5BQ9UGL1 1544 aa38.63■■■■□ 3.78
VPS37B-203ENST00000535765 ABCA8O94911 1581 aa38.61■■■■□ 3.77
VPS37B-203ENST00000535765 RANGAP1P46060 587 aaPredicted RBP38.58■■■■□ 3.77
VPS37B-203ENST00000535765 UBTFP17480 764 aaKnown RBP38.55■■■■□ 3.76
VPS37B-203ENST00000535765 EFCAB5A4FU69 1503 aa38.53■■■■□ 3.76
VPS37B-203ENST00000535765 ZCCHC11Q5TAX3 1644 aaKnown RBP38.52■■■■□ 3.76
VPS37B-203ENST00000535765 EHMT2Q96KQ7 1210 aa38.52■■■■□ 3.76
VPS37B-203ENST00000535765 GLI2P10070 1586 aa38.4■■■■□ 3.74
VPS37B-203ENST00000535765 EPRSP07814 1512 aaKnown RBP38.39■■■■□ 3.74
VPS37B-203ENST00000535765 FHOD3Q2V2M9 1422 aa38.38■■■■□ 3.73
VPS37B-203ENST00000535765 WDR7Q9Y4E6 1490 aa38.37■■■■□ 3.73
VPS37B-203ENST00000535765 RAPGEF6Q8TEU7 1601 aa38.37■■■■□ 3.73
VPS37B-203ENST00000535765 ARID3CA6NKF2 412 aa38.35■■■■□ 3.73
VPS37B-203ENST00000535765 TSPOAP1O95153 1857 aa38.32■■■■□ 3.73
VPS37B-203ENST00000535765 ATP10BO94823 1461 aa38.27■■■■□ 3.72
VPS37B-203ENST00000535765 KCNH8Q96L42 1107 aa38.26■■■■□ 3.72
VPS37B-203ENST00000535765 ARHGAP35Q9NRY4 1499 aa38.26■■■■□ 3.72
VPS37B-203ENST00000535765 NUP153P49790 1475 aaKnown RBP38.2■■■■□ 3.71
VPS37B-203ENST00000535765 KDM6BO15054 1643 aa38.2■■■■□ 3.7
VPS37B-203ENST00000535765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.19■■■■□ 3.7
VPS37B-203ENST00000535765 HNRNPUL2Q1KMD3 747 aaKnown RBP38.19■■■■□ 3.7
VPS37B-203ENST00000535765 MAP3K4Q9Y6R4 1608 aa38.18■■■■□ 3.7
VPS37B-203ENST00000535765 FMN1Q68DA7 1419 aa38.17■■■■□ 3.7
VPS37B-203ENST00000535765 PPRC1Q5VV67 1664 aaKnown RBP38.14■■■■□ 3.7
VPS37B-203ENST00000535765 TEX14Q8IWB6 1497 aa38.12■■■■□ 3.69
VPS37B-203ENST00000535765 CD109Q6YHK3 1445 aa38.09■■■■□ 3.69
VPS37B-203ENST00000535765 CFAP43Q8NDM7 1665 aa38.06■■■■□ 3.68
VPS37B-203ENST00000535765 MAGI3Q5TCQ9 1506 aa37.99■■■■□ 3.67
VPS37B-203ENST00000535765 HECW1Q76N89 1606 aa37.98■■■■□ 3.67
VPS37B-203ENST00000535765 PLEKHD1A6NEE1 506 aa37.97■■■■□ 3.67
VPS37B-203ENST00000535765 CLIP1P30622 1438 aa37.96■■■■□ 3.67
VPS37B-203ENST00000535765 ATP1B4Q9UN42 357 aaPredicted RBP37.95■■■■□ 3.67
VPS37B-203ENST00000535765 COL17A1Q9UMD9 1497 aaPredicted RBP37.93■■■■□ 3.66
VPS37B-203ENST00000535765 ABCA9Q8IUA7 1624 aa37.93■■■■□ 3.66
VPS37B-203ENST00000535765 AEBP2Q6ZN18 517 aaPredicted RBP37.89■■■■□ 3.66
VPS37B-203ENST00000535765 CDK13Q14004 1512 aaKnown RBP37.86■■■■□ 3.65
VPS37B-203ENST00000535765 CASKIN1Q8WXD9 1431 aa37.84■■■■□ 3.65
VPS37B-203ENST00000535765 LRRIQ1Q96JM4 1722 aa37.8■■■■□ 3.64
VPS37B-203ENST00000535765 PCF11O94913 1555 aaKnown RBP37.77■■■■□ 3.64
VPS37B-203ENST00000535765 CDK11AQ9UQ88 783 aaPredicted RBP37.77■■■■□ 3.64
VPS37B-203ENST00000535765 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
VPS37B-203ENST00000535765 FYCO1Q9BQS8 1478 aa37.74■■■■□ 3.63
VPS37B-203ENST00000535765 CCDC18Q5T9S5 1454 aa37.72■■■■□ 3.63
VPS37B-203ENST00000535765 LOC105371045A0A1W2PR82 267 aa37.72■■■■□ 3.63
VPS37B-203ENST00000535765 PHLDB1Q86UU1 1377 aa37.71■■■■□ 3.63
VPS37B-203ENST00000535765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.69■■■■□ 3.62
VPS37B-203ENST00000535765 ARAP3Q8WWN8 1544 aa37.66■■■■□ 3.62
VPS37B-203ENST00000535765 NEO1Q92859 1461 aa37.65■■■■□ 3.62
VPS37B-203ENST00000535765 TROQ12816 1431 aaPredicted RBP37.62■■■■□ 3.61
VPS37B-203ENST00000535765 TTC37Q6PGP7 1564 aa37.6■■■■□ 3.61
VPS37B-203ENST00000535765 KDM4FA0A1W2PPD8 638 aa37.57■■■■□ 3.6
VPS37B-203ENST00000535765 KIF14Q15058 1648 aa37.55■■■■□ 3.6
VPS37B-203ENST00000535765 FANCAO15360 1455 aa37.53■■■■□ 3.6
VPS37B-203ENST00000535765 RAPGEF3O95398 923 aa37.53■■■■□ 3.6
VPS37B-203ENST00000535765 CFAP74Q9C0B2 1584 aa37.52■■■■□ 3.6
VPS37B-203ENST00000535765 PLCH2O75038 1416 aa37.49■■■■□ 3.59
VPS37B-203ENST00000535765 MYO5CQ9NQX4 1742 aa37.49■■■■□ 3.59
VPS37B-203ENST00000535765 AKNAQ7Z591 1439 aa37.48■■■■□ 3.59
VPS37B-203ENST00000535765 DENND4BO75064 1496 aaPredicted RBP37.41■■■■□ 3.58
VPS37B-203ENST00000535765 ADGRL1O94910 1474 aa37.41■■■■□ 3.58
VPS37B-203ENST00000535765 EFCAB2Q5VUJ9 269 aa37.38■■■■□ 3.57
VPS37B-203ENST00000535765 VPS8Q8N3P4 1428 aa37.35■■■■□ 3.57
VPS37B-203ENST00000535765 FRMPD1Q5SYB0 1578 aa37.34■■■■□ 3.57
VPS37B-203ENST00000535765 RICTORQ6R327 1708 aa37.31■■■■□ 3.56
VPS37B-203ENST00000535765 CDC42BPBQ9Y5S2 1711 aa37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms