RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
CCDC60-202ENST00000535685 NUP160Q12769 1436 aa18.91■□□□□ 0.62
CCDC60-202ENST00000535685 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
CCDC60-202ENST00000535685 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
CCDC60-202ENST00000535685 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
CCDC60-202ENST00000535685 IGF1RP08069 1367 aa18.76■□□□□ 0.59
CCDC60-202ENST00000535685 CUL7Q14999 1698 aa18.74■□□□□ 0.59
CCDC60-202ENST00000535685 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
CCDC60-202ENST00000535685 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
CCDC60-202ENST00000535685 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
CCDC60-202ENST00000535685 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
CCDC60-202ENST00000535685 PRG4Q92954 1404 aaPredicted RBP18.65■□□□□ 0.58
CCDC60-202ENST00000535685 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.58
CCDC60-202ENST00000535685 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CCDC60-202ENST00000535685 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
CCDC60-202ENST00000535685 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
CCDC60-202ENST00000535685 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
CCDC60-202ENST00000535685 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
CCDC60-202ENST00000535685 KIF13AQ9H1H9 1805 aa18.43■□□□□ 0.54
CCDC60-202ENST00000535685 CARMIL2Q6F5E8 1435 aa18.42■□□□□ 0.54
CCDC60-202ENST00000535685 MAPKBP1O60336 1514 aa18.42■□□□□ 0.54
CCDC60-202ENST00000535685 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
CCDC60-202ENST00000535685 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
CCDC60-202ENST00000535685 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
CCDC60-202ENST00000535685 PTPRGP23470 1445 aa18.4■□□□□ 0.54
CCDC60-202ENST00000535685 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.54
CCDC60-202ENST00000535685 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC60-202ENST00000535685 PRXQ9BXM0 1461 aa18.37■□□□□ 0.53
CCDC60-202ENST00000535685 DISP1Q96F81 1524 aa18.37■□□□□ 0.53
CCDC60-202ENST00000535685 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
CCDC60-202ENST00000535685 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
CCDC60-202ENST00000535685 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.52
CCDC60-202ENST00000535685 KIAA0556O60303 1618 aa18.3■□□□□ 0.52
CCDC60-202ENST00000535685 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
CCDC60-202ENST00000535685 ABCC2Q92887 1545 aa18.29■□□□□ 0.52
CCDC60-202ENST00000535685 UACAQ9BZF9 1416 aa18.28■□□□□ 0.52
CCDC60-202ENST00000535685 MSH5O43196 834 aa18.27■□□□□ 0.52
CCDC60-202ENST00000535685 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
CCDC60-202ENST00000535685 EEA1Q15075 1411 aa18.25■□□□□ 0.51
CCDC60-202ENST00000535685 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
CCDC60-202ENST00000535685 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
CCDC60-202ENST00000535685 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
CCDC60-202ENST00000535685 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
CCDC60-202ENST00000535685 GLI2P10070 1586 aa18.19■□□□□ 0.5
CCDC60-202ENST00000535685 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
CCDC60-202ENST00000535685 ASXL2Q76L83 1435 aa18.18■□□□□ 0.5
CCDC60-202ENST00000535685 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
CCDC60-202ENST00000535685 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
CCDC60-202ENST00000535685 TSPOAP1O95153 1857 aa18.14■□□□□ 0.49
CCDC60-202ENST00000535685 ABCA8O94911 1581 aa18.14■□□□□ 0.49
CCDC60-202ENST00000535685 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
CCDC60-202ENST00000535685 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
CCDC60-202ENST00000535685 PPRC1Q5VV67 1664 aaKnown RBP18.09■□□□□ 0.49
CCDC60-202ENST00000535685 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
CCDC60-202ENST00000535685 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
CCDC60-202ENST00000535685 KIF21BO75037 1637 aa18.07■□□□□ 0.48
CCDC60-202ENST00000535685 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
CCDC60-202ENST00000535685 KDM6BO15054 1643 aa18.06■□□□□ 0.48
CCDC60-202ENST00000535685 WDR7Q9Y4E6 1490 aa18.06■□□□□ 0.48
CCDC60-202ENST00000535685 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
CCDC60-202ENST00000535685 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
CCDC60-202ENST00000535685 TEX14Q8IWB6 1497 aa17.99■□□□□ 0.47
CCDC60-202ENST00000535685 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
CCDC60-202ENST00000535685 ATP10BO94823 1461 aa17.97■□□□□ 0.47
CCDC60-202ENST00000535685 P3H3Q8IVL6 736 aa17.96■□□□□ 0.47
CCDC60-202ENST00000535685 RAPGEF6Q8TEU7 1601 aa17.96■□□□□ 0.47
CCDC60-202ENST00000535685 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
CCDC60-202ENST00000535685 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
CCDC60-202ENST00000535685 CD109Q6YHK3 1445 aa17.91■□□□□ 0.46
CCDC60-202ENST00000535685 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
CCDC60-202ENST00000535685 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
CCDC60-202ENST00000535685 NUP153P49790 1475 aaKnown RBP17.88■□□□□ 0.45
CCDC60-202ENST00000535685 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
CCDC60-202ENST00000535685 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
CCDC60-202ENST00000535685 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
CCDC60-202ENST00000535685 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
CCDC60-202ENST00000535685 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
CCDC60-202ENST00000535685 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
CCDC60-202ENST00000535685 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
CCDC60-202ENST00000535685 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
CCDC60-202ENST00000535685 ARHGAP35Q9NRY4 1499 aa17.78■□□□□ 0.44
CCDC60-202ENST00000535685 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
CCDC60-202ENST00000535685 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
CCDC60-202ENST00000535685 PLEKHD1A6NEE1 506 aa17.77■□□□□ 0.44
CCDC60-202ENST00000535685 NEO1Q92859 1461 aa17.75■□□□□ 0.43
CCDC60-202ENST00000535685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
CCDC60-202ENST00000535685 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
CCDC60-202ENST00000535685 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
CCDC60-202ENST00000535685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC60-202ENST00000535685 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
CCDC60-202ENST00000535685 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
CCDC60-202ENST00000535685 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
CCDC60-202ENST00000535685 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
CCDC60-202ENST00000535685 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
CCDC60-202ENST00000535685 LRRIQ1Q96JM4 1722 aa17.63■□□□□ 0.41
CCDC60-202ENST00000535685 FRMPD1Q5SYB0 1578 aa17.62■□□□□ 0.41
CCDC60-202ENST00000535685 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
CCDC60-202ENST00000535685 FANCAO15360 1455 aa17.62■□□□□ 0.41
CCDC60-202ENST00000535685 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
CCDC60-202ENST00000535685 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms