RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
COPB1-211ENST00000534234 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
COPB1-211ENST00000534234 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
COPB1-211ENST00000534234 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
COPB1-211ENST00000534234 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
COPB1-211ENST00000534234 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
COPB1-211ENST00000534234 CUL7Q14999 1698 aa15.28■□□□□ 0.04
COPB1-211ENST00000534234 TTBK1Q5TCY1 1321 aaPredicted RBP15.22■□□□□ 0.03
COPB1-211ENST00000534234 PTPRGP23470 1445 aa15.2■□□□□ 0.02
COPB1-211ENST00000534234 CARMIL2Q6F5E8 1435 aa15.19■□□□□ 0.02
COPB1-211ENST00000534234 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
COPB1-211ENST00000534234 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
COPB1-211ENST00000534234 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
COPB1-211ENST00000534234 IQGAP2Q13576 1575 aa15.13■□□□□ 0.01
COPB1-211ENST00000534234 ABCC10Q5T3U5 1492 aa15.13■□□□□ 0.01
COPB1-211ENST00000534234 ADCY10Q96PN6 1610 aa15.12■□□□□ 0.01
COPB1-211ENST00000534234 MAPKBP1O60336 1514 aa15.11■□□□□ 0.01
COPB1-211ENST00000534234 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
COPB1-211ENST00000534234 UACAQ9BZF9 1416 aa15.07■□□□□ 0
COPB1-211ENST00000534234 ABCC2Q92887 1545 aa15.06■□□□□ 0
COPB1-211ENST00000534234 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
COPB1-211ENST00000534234 PRXQ9BXM0 1461 aa15.04■□□□□ -0
COPB1-211ENST00000534234 KIF13AQ9H1H9 1805 aa15.04■□□□□ -0
COPB1-211ENST00000534234 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
COPB1-211ENST00000534234 UHRF1BP1LA0JNW5 1464 aa15.03■□□□□ -0
COPB1-211ENST00000534234 DIP2BQ9P265 1576 aa15.03■□□□□ -0
COPB1-211ENST00000534234 ASXL2Q76L83 1435 aa15.02□□□□□ -0.01
COPB1-211ENST00000534234 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
COPB1-211ENST00000534234 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
COPB1-211ENST00000534234 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
COPB1-211ENST00000534234 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
COPB1-211ENST00000534234 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
COPB1-211ENST00000534234 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
COPB1-211ENST00000534234 EEA1Q15075 1411 aa14.91□□□□□ -0.02
COPB1-211ENST00000534234 CTTNBP2Q8WZ74 1663 aa14.91□□□□□ -0.02
COPB1-211ENST00000534234 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
COPB1-211ENST00000534234 GLI2P10070 1586 aa14.9□□□□□ -0.02
COPB1-211ENST00000534234 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
COPB1-211ENST00000534234 KDM6BO15054 1643 aa14.89□□□□□ -0.03
COPB1-211ENST00000534234 RANGAP1P46060 587 aaPredicted RBP14.88□□□□□ -0.03
COPB1-211ENST00000534234 ZCCHC11Q5TAX3 1644 aaKnown RBP14.87□□□□□ -0.03
COPB1-211ENST00000534234 TSPOAP1O95153 1857 aa14.87□□□□□ -0.03
COPB1-211ENST00000534234 ARID3CA6NKF2 412 aa14.86□□□□□ -0.03
COPB1-211ENST00000534234 WDR7Q9Y4E6 1490 aa14.86□□□□□ -0.03
COPB1-211ENST00000534234 ABCA8O94911 1581 aa14.86□□□□□ -0.03
COPB1-211ENST00000534234 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
COPB1-211ENST00000534234 COL17A1Q9UMD9 1497 aaPredicted RBP14.81□□□□□ -0.04
COPB1-211ENST00000534234 KDM4FA0A1W2PPD8 638 aa14.81□□□□□ -0.04
COPB1-211ENST00000534234 CD109Q6YHK3 1445 aa14.8□□□□□ -0.04
COPB1-211ENST00000534234 ATP10BO94823 1461 aa14.8□□□□□ -0.04
COPB1-211ENST00000534234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
COPB1-211ENST00000534234 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
COPB1-211ENST00000534234 PPRC1Q5VV67 1664 aaKnown RBP14.8□□□□□ -0.04
COPB1-211ENST00000534234 MAP3K4Q9Y6R4 1608 aa14.79□□□□□ -0.04
COPB1-211ENST00000534234 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
COPB1-211ENST00000534234 UBTFP17480 764 aaKnown RBP14.77□□□□□ -0.05
COPB1-211ENST00000534234 SAMD9Q5K651 1589 aa14.76□□□□□ -0.05
COPB1-211ENST00000534234 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
COPB1-211ENST00000534234 MAGI3Q5TCQ9 1506 aa14.75□□□□□ -0.05
COPB1-211ENST00000534234 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
COPB1-211ENST00000534234 KIF21BO75037 1637 aa14.71□□□□□ -0.05
COPB1-211ENST00000534234 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
COPB1-211ENST00000534234 NUP153P49790 1475 aaKnown RBP14.7□□□□□ -0.06
COPB1-211ENST00000534234 RAPGEF6Q8TEU7 1601 aa14.7□□□□□ -0.06
COPB1-211ENST00000534234 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
COPB1-211ENST00000534234 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
COPB1-211ENST00000534234 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
COPB1-211ENST00000534234 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
COPB1-211ENST00000534234 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
COPB1-211ENST00000534234 ADGRL1O94910 1474 aa14.64□□□□□ -0.07
COPB1-211ENST00000534234 ARAP3Q8WWN8 1544 aa14.63□□□□□ -0.07
COPB1-211ENST00000534234 RAPGEF3O95398 923 aa14.63□□□□□ -0.07
COPB1-211ENST00000534234 ABCA9Q8IUA7 1624 aa14.62□□□□□ -0.07
COPB1-211ENST00000534234 NEO1Q92859 1461 aa14.59□□□□□ -0.07
COPB1-211ENST00000534234 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
COPB1-211ENST00000534234 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
COPB1-211ENST00000534234 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
COPB1-211ENST00000534234 CDK13Q14004 1512 aaKnown RBP14.55□□□□□ -0.08
COPB1-211ENST00000534234 AKNAQ7Z591 1439 aa14.53□□□□□ -0.08
COPB1-211ENST00000534234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.084e-7■■■■□ 24.7
COPB1-211ENST00000534234 FANCAO15360 1455 aa14.52□□□□□ -0.09
COPB1-211ENST00000534234 DENND4BO75064 1496 aaPredicted RBP14.51□□□□□ -0.09
COPB1-211ENST00000534234 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
COPB1-211ENST00000534234 PLCH2O75038 1416 aa14.49□□□□□ -0.09
COPB1-211ENST00000534234 EFCAB2Q5VUJ9 269 aa14.49□□□□□ -0.09
COPB1-211ENST00000534234 HECW1Q76N89 1606 aa14.48□□□□□ -0.09
COPB1-211ENST00000534234 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
COPB1-211ENST00000534234 SCAPERQ9BY12 1400 aa14.46□□□□□ -0.1
COPB1-211ENST00000534234 TROQ12816 1431 aaPredicted RBP14.45□□□□□ -0.1
COPB1-211ENST00000534234 FRMPD1Q5SYB0 1578 aa14.44□□□□□ -0.1
COPB1-211ENST00000534234 CASKIN1Q8WXD9 1431 aa14.44□□□□□ -0.1
COPB1-211ENST00000534234 CLIP1P30622 1438 aa14.43□□□□□ -0.1
COPB1-211ENST00000534234 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
COPB1-211ENST00000534234 YEATS2Q9ULM3 1422 aa14.4□□□□□ -0.1
COPB1-211ENST00000534234 PTPRMP28827 1452 aa14.39□□□□□ -0.11
COPB1-211ENST00000534234 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
COPB1-211ENST00000534234 AFAP1Q8N556 730 aa14.39□□□□□ -0.11
COPB1-211ENST00000534234 POGZQ7Z3K3 1410 aa14.39□□□□□ -0.11
COPB1-211ENST00000534234 KIF14Q15058 1648 aa14.38□□□□□ -0.11
COPB1-211ENST00000534234 CCDC18Q5T9S5 1454 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms