RNA–Protein interactions for RNA: ENST00000533835.5

VNN2-216, Transcript of vanin 2, humanhuman

TSL 2

Gene VNN2, Length 1,123 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN2-216ENST00000533835 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
VNN2-216ENST00000533835 SMARCA2P51531 1590 aa11.93□□□□□ -0.5
VNN2-216ENST00000533835 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
VNN2-216ENST00000533835 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
VNN2-216ENST00000533835 FKBP8Q14318 412 aa11.87□□□□□ -0.51
VNN2-216ENST00000533835 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
VNN2-216ENST00000533835 NESP48681 1621 aa11.86□□□□□ -0.51
VNN2-216ENST00000533835 WIZO95785 1651 aa11.83□□□□□ -0.52
VNN2-216ENST00000533835 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
VNN2-216ENST00000533835 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
VNN2-216ENST00000533835 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
VNN2-216ENST00000533835 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
VNN2-216ENST00000533835 GABBR2O75899 941 aa11.73□□□□□ -0.53
VNN2-216ENST00000533835 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
VNN2-216ENST00000533835 MIER1Q8N108 512 aa11.68□□□□□ -0.54
VNN2-216ENST00000533835 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
VNN2-216ENST00000533835 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
VNN2-216ENST00000533835 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
VNN2-216ENST00000533835 CUX2O14529 1486 aa11.65□□□□□ -0.54
VNN2-216ENST00000533835 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
VNN2-216ENST00000533835 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
VNN2-216ENST00000533835 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
VNN2-216ENST00000533835 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
VNN2-216ENST00000533835 CLCN6P51797 869 aa11.63□□□□□ -0.55
VNN2-216ENST00000533835 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
VNN2-216ENST00000533835 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
VNN2-216ENST00000533835 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
VNN2-216ENST00000533835 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
VNN2-216ENST00000533835 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
VNN2-216ENST00000533835 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
VNN2-216ENST00000533835 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
VNN2-216ENST00000533835 CFTRP13569 1480 aa11.56□□□□□ -0.56
VNN2-216ENST00000533835 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
VNN2-216ENST00000533835 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
VNN2-216ENST00000533835 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
VNN2-216ENST00000533835 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
VNN2-216ENST00000533835 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
VNN2-216ENST00000533835 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
VNN2-216ENST00000533835 WDR62O43379 1518 aa11.49□□□□□ -0.57
VNN2-216ENST00000533835 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
VNN2-216ENST00000533835 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
VNN2-216ENST00000533835 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
VNN2-216ENST00000533835 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
VNN2-216ENST00000533835 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
VNN2-216ENST00000533835 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
VNN2-216ENST00000533835 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
VNN2-216ENST00000533835 NUBP1P53384 320 aa11.43□□□□□ -0.58
VNN2-216ENST00000533835 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
VNN2-216ENST00000533835 KIF12Q96FN5 646 aa11.38□□□□□ -0.59
VNN2-216ENST00000533835 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
VNN2-216ENST00000533835 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
VNN2-216ENST00000533835 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
VNN2-216ENST00000533835 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
VNN2-216ENST00000533835 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
VNN2-216ENST00000533835 MAP3K13O43283 966 aa11.32□□□□□ -0.6
VNN2-216ENST00000533835 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
VNN2-216ENST00000533835 LHX8Q68G74 356 aa11.3□□□□□ -0.6
VNN2-216ENST00000533835 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
VNN2-216ENST00000533835 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
VNN2-216ENST00000533835 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
VNN2-216ENST00000533835 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
VNN2-216ENST00000533835 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
VNN2-216ENST00000533835 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
VNN2-216ENST00000533835 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
VNN2-216ENST00000533835 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
VNN2-216ENST00000533835 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
VNN2-216ENST00000533835 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
VNN2-216ENST00000533835 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
VNN2-216ENST00000533835 CUX1P39880 1505 aa11.24□□□□□ -0.61
VNN2-216ENST00000533835 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
VNN2-216ENST00000533835 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
VNN2-216ENST00000533835 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
VNN2-216ENST00000533835 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
VNN2-216ENST00000533835 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
VNN2-216ENST00000533835 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
VNN2-216ENST00000533835 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
VNN2-216ENST00000533835 SOGA1O94964 1423 aa11.19□□□□□ -0.62
VNN2-216ENST00000533835 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
VNN2-216ENST00000533835 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
VNN2-216ENST00000533835 TIE1P35590 1138 aa11.18□□□□□ -0.62
VNN2-216ENST00000533835 GSE1Q14687 1217 aa11.18□□□□□ -0.62
VNN2-216ENST00000533835 IFNL1Q8IU54 200 aa11.18□□□□□ -0.62
VNN2-216ENST00000533835 PYGBP11216 843 aa11.17□□□□□ -0.62
VNN2-216ENST00000533835 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
VNN2-216ENST00000533835 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
VNN2-216ENST00000533835 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
VNN2-216ENST00000533835 C7P10643 843 aa11.15□□□□□ -0.62
VNN2-216ENST00000533835 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
VNN2-216ENST00000533835 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
VNN2-216ENST00000533835 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
VNN2-216ENST00000533835 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
VNN2-216ENST00000533835 SYNJ1O43426 1573 aa11.09□□□□□ -0.63
VNN2-216ENST00000533835 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
VNN2-216ENST00000533835 CHD1O14646 1710 aa11.09□□□□□ -0.63
VNN2-216ENST00000533835 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
VNN2-216ENST00000533835 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
VNN2-216ENST00000533835 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
VNN2-216ENST00000533835 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
VNN2-216ENST00000533835 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
VNN2-216ENST00000533835 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms