RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 NUP160Q12769 1436 aa17.17■□□□□ 0.34
PACS1-213ENST00000533756 SHROOM2Q13796 1616 aa17.17■□□□□ 0.34
PACS1-213ENST00000533756 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
PACS1-213ENST00000533756 LMTK3Q96Q04 1460 aa17.11■□□□□ 0.33
PACS1-213ENST00000533756 CUX1P39880 1505 aa17.08■□□□□ 0.32
PACS1-213ENST00000533756 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
PACS1-213ENST00000533756 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
PACS1-213ENST00000533756 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
PACS1-213ENST00000533756 SOCS7O14512 581 aa17.03■□□□□ 0.32
PACS1-213ENST00000533756 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
PACS1-213ENST00000533756 TSPOAP1O95153 1857 aa17.03■□□□□ 0.32
PACS1-213ENST00000533756 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
PACS1-213ENST00000533756 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
PACS1-213ENST00000533756 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.3
PACS1-213ENST00000533756 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
PACS1-213ENST00000533756 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
PACS1-213ENST00000533756 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
PACS1-213ENST00000533756 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
PACS1-213ENST00000533756 GLI2P10070 1586 aa16.85■□□□□ 0.29
PACS1-213ENST00000533756 PPRC1Q5VV67 1664 aaKnown RBP16.85■□□□□ 0.29
PACS1-213ENST00000533756 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
PACS1-213ENST00000533756 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
PACS1-213ENST00000533756 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
PACS1-213ENST00000533756 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
PACS1-213ENST00000533756 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
PACS1-213ENST00000533756 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
PACS1-213ENST00000533756 TEX14Q8IWB6 1497 aa16.75■□□□□ 0.27
PACS1-213ENST00000533756 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
PACS1-213ENST00000533756 PTPRGP23470 1445 aa16.7■□□□□ 0.26
PACS1-213ENST00000533756 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
PACS1-213ENST00000533756 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
PACS1-213ENST00000533756 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
PACS1-213ENST00000533756 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
PACS1-213ENST00000533756 PTPRMP28827 1452 aa16.61■□□□□ 0.25
PACS1-213ENST00000533756 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
PACS1-213ENST00000533756 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
PACS1-213ENST00000533756 PCF11O94913 1555 aaKnown RBP16.59■□□□□ 0.25
PACS1-213ENST00000533756 CUL7Q14999 1698 aa16.56■□□□□ 0.24
PACS1-213ENST00000533756 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
PACS1-213ENST00000533756 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
PACS1-213ENST00000533756 CARMIL2Q6F5E8 1435 aa16.54■□□□□ 0.24
PACS1-213ENST00000533756 UACAQ9BZF9 1416 aa16.54■□□□□ 0.24
PACS1-213ENST00000533756 KIF21BO75037 1637 aa16.53■□□□□ 0.24
PACS1-213ENST00000533756 SPATA31D1Q6ZQQ2 1576 aa16.53■□□□□ 0.24
PACS1-213ENST00000533756 KDM5BQ9UGL1 1544 aa16.53■□□□□ 0.24
PACS1-213ENST00000533756 ADAMTSL3P82987 1691 aa16.52■□□□□ 0.23
PACS1-213ENST00000533756 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
PACS1-213ENST00000533756 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
PACS1-213ENST00000533756 HSPA2P54652 639 aa16.44■□□□□ 0.22
PACS1-213ENST00000533756 WDR7Q9Y4E6 1490 aa16.43■□□□□ 0.22
PACS1-213ENST00000533756 ZCCHC11Q5TAX3 1644 aaKnown RBP16.41■□□□□ 0.22
PACS1-213ENST00000533756 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
PACS1-213ENST00000533756 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
PACS1-213ENST00000533756 IGF1RP08069 1367 aa16.39■□□□□ 0.21
PACS1-213ENST00000533756 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
PACS1-213ENST00000533756 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
PACS1-213ENST00000533756 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
PACS1-213ENST00000533756 KCNH8Q96L42 1107 aa16.33■□□□□ 0.2
PACS1-213ENST00000533756 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
PACS1-213ENST00000533756 PHLDB1Q86UU1 1377 aa16.33■□□□□ 0.2
PACS1-213ENST00000533756 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
PACS1-213ENST00000533756 ADRA2BP18089 450 aa16.32■□□□□ 0.2
PACS1-213ENST00000533756 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
PACS1-213ENST00000533756 IQGAP2Q13576 1575 aa16.3■□□□□ 0.2
PACS1-213ENST00000533756 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
PACS1-213ENST00000533756 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
PACS1-213ENST00000533756 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
PACS1-213ENST00000533756 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
PACS1-213ENST00000533756 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
PACS1-213ENST00000533756 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
PACS1-213ENST00000533756 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
PACS1-213ENST00000533756 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
PACS1-213ENST00000533756 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
PACS1-213ENST00000533756 NEO1Q92859 1461 aa16.16■□□□□ 0.18
PACS1-213ENST00000533756 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
PACS1-213ENST00000533756 MSH5O43196 834 aa16.16■□□□□ 0.18
PACS1-213ENST00000533756 PTPRTO14522 1441 aa16.11■□□□□ 0.17
PACS1-213ENST00000533756 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
PACS1-213ENST00000533756 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
PACS1-213ENST00000533756 FANCAO15360 1455 aa16.1■□□□□ 0.17
PACS1-213ENST00000533756 ARHGEF40Q8TER5 1519 aa16.1■□□□□ 0.17
PACS1-213ENST00000533756 ABCA8O94911 1581 aa16.1■□□□□ 0.17
PACS1-213ENST00000533756 ABCA9Q8IUA7 1624 aa16.09■□□□□ 0.17
PACS1-213ENST00000533756 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
PACS1-213ENST00000533756 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.17
PACS1-213ENST00000533756 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.17
PACS1-213ENST00000533756 AKNAQ7Z591 1439 aa16.06■□□□□ 0.16
PACS1-213ENST00000533756 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
PACS1-213ENST00000533756 MLECQ14165 292 aa16.02■□□□□ 0.16
PACS1-213ENST00000533756 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.15
PACS1-213ENST00000533756 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.15
PACS1-213ENST00000533756 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
PACS1-213ENST00000533756 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
PACS1-213ENST00000533756 FER1L4A9Z1Z3 1794 aa16■□□□□ 0.15
PACS1-213ENST00000533756 ATP10BO94823 1461 aa15.98■□□□□ 0.15
PACS1-213ENST00000533756 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
PACS1-213ENST00000533756 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
PACS1-213ENST00000533756 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
PACS1-213ENST00000533756 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
PACS1-213ENST00000533756 RICTORQ6R327 1708 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms