RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
ZNF250-209ENST00000533543 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
ZNF250-209ENST00000533543 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
ZNF250-209ENST00000533543 NUP160Q12769 1436 aa16.04■□□□□ 0.16
ZNF250-209ENST00000533543 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
ZNF250-209ENST00000533543 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
ZNF250-209ENST00000533543 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
ZNF250-209ENST00000533543 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
ZNF250-209ENST00000533543 IGF1RP08069 1367 aa16■□□□□ 0.15
ZNF250-209ENST00000533543 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
ZNF250-209ENST00000533543 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
ZNF250-209ENST00000533543 CUL7Q14999 1698 aa15.91■□□□□ 0.14
ZNF250-209ENST00000533543 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
ZNF250-209ENST00000533543 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
ZNF250-209ENST00000533543 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
ZNF250-209ENST00000533543 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
ZNF250-209ENST00000533543 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
ZNF250-209ENST00000533543 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
ZNF250-209ENST00000533543 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
ZNF250-209ENST00000533543 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
ZNF250-209ENST00000533543 IQGAP2Q13576 1575 aa15.71■□□□□ 0.11
ZNF250-209ENST00000533543 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
ZNF250-209ENST00000533543 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
ZNF250-209ENST00000533543 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
ZNF250-209ENST00000533543 CARMIL2Q6F5E8 1435 aa15.67■□□□□ 0.1
ZNF250-209ENST00000533543 PTPRGP23470 1445 aa15.66■□□□□ 0.1
ZNF250-209ENST00000533543 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
ZNF250-209ENST00000533543 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
ZNF250-209ENST00000533543 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
ZNF250-209ENST00000533543 ADCY10Q96PN6 1610 aa15.63■□□□□ 0.09
ZNF250-209ENST00000533543 UGGT2Q9NYU1 1516 aa15.63■□□□□ 0.09
ZNF250-209ENST00000533543 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
ZNF250-209ENST00000533543 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
ZNF250-209ENST00000533543 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
ZNF250-209ENST00000533543 EEA1Q15075 1411 aa15.59■□□□□ 0.09
ZNF250-209ENST00000533543 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
ZNF250-209ENST00000533543 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
ZNF250-209ENST00000533543 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
ZNF250-209ENST00000533543 UACAQ9BZF9 1416 aa15.54■□□□□ 0.08
ZNF250-209ENST00000533543 FAM69CQ0P6D2 419 aa15.53■□□□□ 0.08
ZNF250-209ENST00000533543 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
ZNF250-209ENST00000533543 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
ZNF250-209ENST00000533543 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.08
ZNF250-209ENST00000533543 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.07
ZNF250-209ENST00000533543 KIF13AQ9H1H9 1805 aa15.5■□□□□ 0.07
ZNF250-209ENST00000533543 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
ZNF250-209ENST00000533543 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
ZNF250-209ENST00000533543 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
ZNF250-209ENST00000533543 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
ZNF250-209ENST00000533543 PLB1Q6P1J6 1458 aa15.46■□□□□ 0.07
ZNF250-209ENST00000533543 ASXL2Q76L83 1435 aa15.46■□□□□ 0.07
ZNF250-209ENST00000533543 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
ZNF250-209ENST00000533543 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
ZNF250-209ENST00000533543 KIF21BO75037 1637 aa15.43■□□□□ 0.06
ZNF250-209ENST00000533543 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
ZNF250-209ENST00000533543 ABCA8O94911 1581 aa15.41■□□□□ 0.06
ZNF250-209ENST00000533543 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
ZNF250-209ENST00000533543 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
ZNF250-209ENST00000533543 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
ZNF250-209ENST00000533543 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
ZNF250-209ENST00000533543 EPRSP07814 1512 aaKnown RBP15.37■□□□□ 0.05
ZNF250-209ENST00000533543 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
ZNF250-209ENST00000533543 GLI2P10070 1586 aa15.35■□□□□ 0.05
ZNF250-209ENST00000533543 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
ZNF250-209ENST00000533543 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
ZNF250-209ENST00000533543 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
ZNF250-209ENST00000533543 ATP10BO94823 1461 aa15.3■□□□□ 0.04
ZNF250-209ENST00000533543 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
ZNF250-209ENST00000533543 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
ZNF250-209ENST00000533543 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
ZNF250-209ENST00000533543 KDM6BO15054 1643 aa15.27■□□□□ 0.03
ZNF250-209ENST00000533543 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.03
ZNF250-209ENST00000533543 MAP3K4Q9Y6R4 1608 aa15.26■□□□□ 0.03
ZNF250-209ENST00000533543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
ZNF250-209ENST00000533543 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
ZNF250-209ENST00000533543 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
ZNF250-209ENST00000533543 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
ZNF250-209ENST00000533543 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
ZNF250-209ENST00000533543 CD109Q6YHK3 1445 aa15.23■□□□□ 0.03
ZNF250-209ENST00000533543 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
ZNF250-209ENST00000533543 KCNA4P22459 653 aa15.22■□□□□ 0.03
ZNF250-209ENST00000533543 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
ZNF250-209ENST00000533543 MAGI3Q5TCQ9 1506 aa15.19■□□□□ 0.02
ZNF250-209ENST00000533543 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
ZNF250-209ENST00000533543 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
ZNF250-209ENST00000533543 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
ZNF250-209ENST00000533543 PLEKHD1A6NEE1 506 aa15.16■□□□□ 0.02
ZNF250-209ENST00000533543 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
ZNF250-209ENST00000533543 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
ZNF250-209ENST00000533543 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
ZNF250-209ENST00000533543 CLIP1P30622 1438 aa15.09■□□□□ 0.01
ZNF250-209ENST00000533543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.06■□□□□ 0
ZNF250-209ENST00000533543 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
ZNF250-209ENST00000533543 KDM4FA0A1W2PPD8 638 aa15.05■□□□□ -0
ZNF250-209ENST00000533543 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
ZNF250-209ENST00000533543 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
ZNF250-209ENST00000533543 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
ZNF250-209ENST00000533543 NEO1Q92859 1461 aa15.05■□□□□ -0
ZNF250-209ENST00000533543 PCF11O94913 1555 aaKnown RBP15.04■□□□□ -0
ZNF250-209ENST00000533543 TTC37Q6PGP7 1564 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms