RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
UBXN1-215ENST00000533476 CFAP43Q8NDM7 1665 aa28.86■■■□□ 2.21
UBXN1-215ENST00000533476 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
UBXN1-215ENST00000533476 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
UBXN1-215ENST00000533476 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
UBXN1-215ENST00000533476 TDRD9Q8NDG6 1382 aaKnown RBP28.81■■■□□ 2.2
UBXN1-215ENST00000533476 CCNB3Q8WWL7 1395 aa28.81■■■□□ 2.2
UBXN1-215ENST00000533476 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
UBXN1-215ENST00000533476 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.28e-8■■■■□ 24
UBXN1-215ENST00000533476 FYCO1Q9BQS8 1478 aa28.78■■■□□ 2.2
UBXN1-215ENST00000533476 FHOD3Q2V2M9 1422 aa28.77■■■□□ 2.2
UBXN1-215ENST00000533476 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
UBXN1-215ENST00000533476 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
UBXN1-215ENST00000533476 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
UBXN1-215ENST00000533476 SAMD9Q5K651 1589 aa28.7■■■□□ 2.19
UBXN1-215ENST00000533476 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
UBXN1-215ENST00000533476 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
UBXN1-215ENST00000533476 DHX57Q6P158 1386 aaKnown RBP28.66■■■□□ 2.18
UBXN1-215ENST00000533476 PBRM1Q86U86 1689 aa28.66■■■□□ 2.18
UBXN1-215ENST00000533476 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
UBXN1-215ENST00000533476 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
UBXN1-215ENST00000533476 PHLDB1Q86UU1 1377 aa28.6■■■□□ 2.17
UBXN1-215ENST00000533476 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
UBXN1-215ENST00000533476 DIEXFQ68CQ4 756 aaKnown RBP28.59■■■□□ 2.17
UBXN1-215ENST00000533476 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
UBXN1-215ENST00000533476 WDR62O43379 1518 aa28.53■■■□□ 2.16
UBXN1-215ENST00000533476 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
UBXN1-215ENST00000533476 GRIN2BQ13224 1484 aa28.48■■■□□ 2.15
UBXN1-215ENST00000533476 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
UBXN1-215ENST00000533476 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
UBXN1-215ENST00000533476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.44■■■□□ 2.14
UBXN1-215ENST00000533476 ITGAEP38570 1179 aa28.43■■■□□ 2.14
UBXN1-215ENST00000533476 IQGAP2Q13576 1575 aa28.43■■■□□ 2.14
UBXN1-215ENST00000533476 RAB3GAP2Q9H2M9 1393 aa28.42■■■□□ 2.14
UBXN1-215ENST00000533476 SETD5Q9C0A6 1442 aa28.4■■■□□ 2.14
UBXN1-215ENST00000533476 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
UBXN1-215ENST00000533476 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
UBXN1-215ENST00000533476 MTUS2Q5JR59 1369 aa28.34■■■□□ 2.13
UBXN1-215ENST00000533476 FGD6Q6ZV73 1430 aa28.33■■■□□ 2.13
UBXN1-215ENST00000533476 EHBP1L1Q8N3D4 1523 aa28.32■■■□□ 2.12
UBXN1-215ENST00000533476 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
UBXN1-215ENST00000533476 MAPKBP1O60336 1514 aa28.3■■■□□ 2.12
UBXN1-215ENST00000533476 UGGT2Q9NYU1 1516 aa28.29■■■□□ 2.12
UBXN1-215ENST00000533476 HECW1Q76N89 1606 aa28.29■■■□□ 2.12
UBXN1-215ENST00000533476 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
UBXN1-215ENST00000533476 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
UBXN1-215ENST00000533476 NCOA2Q15596 1464 aa28.25■■■□□ 2.11
UBXN1-215ENST00000533476 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
UBXN1-215ENST00000533476 MYOM3Q5VTT5 1437 aa28.21■■■□□ 2.11
UBXN1-215ENST00000533476 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
UBXN1-215ENST00000533476 KIAA0586Q9BVV6 1533 aa28.2■■■□□ 2.1
UBXN1-215ENST00000533476 MAGI3Q5TCQ9 1506 aa28.19■■■□□ 2.1
UBXN1-215ENST00000533476 GRIN2AQ12879 1464 aa28.17■■■□□ 2.1
UBXN1-215ENST00000533476 ACIN1Q9UKV3 1341 aaKnown RBP28.16■■■□□ 2.1
UBXN1-215ENST00000533476 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
UBXN1-215ENST00000533476 KIAA0556O60303 1618 aa28.14■■■□□ 2.09
UBXN1-215ENST00000533476 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
UBXN1-215ENST00000533476 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
UBXN1-215ENST00000533476 DISP1Q96F81 1524 aa28.1■■■□□ 2.09
UBXN1-215ENST00000533476 HFM1A2PYH4 1435 aa28.08■■■□□ 2.09
UBXN1-215ENST00000533476 CENPBP07199 599 aaPredicted RBP28.08■■■□□ 2.09
UBXN1-215ENST00000533476 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
UBXN1-215ENST00000533476 TCOF1Q13428 1488 aaKnown RBP28.06■■■□□ 2.08
UBXN1-215ENST00000533476 CDK13Q14004 1512 aaKnown RBP28.05■■■□□ 2.08
UBXN1-215ENST00000533476 SYNJ2O15056 1496 aa28.03■■■□□ 2.08
UBXN1-215ENST00000533476 NEUROD1Q13562 356 aa28■■■□□ 2.07
UBXN1-215ENST00000533476 MIER1Q8N108 512 aa28■■■□□ 2.07
UBXN1-215ENST00000533476 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
UBXN1-215ENST00000533476 RAPGEF6Q8TEU7 1601 aa27.97■■■□□ 2.07
UBXN1-215ENST00000533476 NAIPQ13075 1403 aa27.97■■■□□ 2.07
UBXN1-215ENST00000533476 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
UBXN1-215ENST00000533476 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.06
UBXN1-215ENST00000533476 UACAQ9BZF9 1416 aa27.94■■■□□ 2.06
UBXN1-215ENST00000533476 NUP153P49790 1475 aaKnown RBP27.93■■■□□ 2.06
UBXN1-215ENST00000533476 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
UBXN1-215ENST00000533476 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
UBXN1-215ENST00000533476 NUP160Q12769 1436 aa27.9■■■□□ 2.06
UBXN1-215ENST00000533476 AKNAQ7Z591 1439 aa27.9■■■□□ 2.06
UBXN1-215ENST00000533476 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
UBXN1-215ENST00000533476 SIN3AQ96ST3 1273 aa27.88■■■□□ 2.05
UBXN1-215ENST00000533476 ARID3CA6NKF2 412 aa27.79■■■□□ 2.04
UBXN1-215ENST00000533476 CARMIL2Q6F5E8 1435 aa27.79■■■□□ 2.04
UBXN1-215ENST00000533476 CDK11AQ9UQ88 783 aaPredicted RBP27.77■■■□□ 2.04
UBXN1-215ENST00000533476 FBLN2P98095 1184 aa27.73■■■□□ 2.03
UBXN1-215ENST00000533476 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
UBXN1-215ENST00000533476 TROQ12816 1431 aaPredicted RBP27.73■■■□□ 2.03
UBXN1-215ENST00000533476 PLB1Q6P1J6 1458 aa27.73■■■□□ 2.03
UBXN1-215ENST00000533476 ADCY10Q96PN6 1610 aa27.72■■■□□ 2.03
UBXN1-215ENST00000533476 PPP1R15AO75807 674 aaPredicted RBP27.71■■■□□ 2.03
UBXN1-215ENST00000533476 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
UBXN1-215ENST00000533476 YTHDC1Q96MU7 727 aaKnown RBP27.71■■■□□ 2.03
UBXN1-215ENST00000533476 GTF3C3Q9Y5Q9 886 aa27.71■■■□□ 2.03
UBXN1-215ENST00000533476 RRP7BPQ9NSQ0 103 aa27.7■■■□□ 2.02
UBXN1-215ENST00000533476 DAPK1P53355 1430 aa27.69■■■□□ 2.02
UBXN1-215ENST00000533476 ROCK1Q13464 1354 aa27.69■■■□□ 2.02
UBXN1-215ENST00000533476 CHIC2Q9UKJ5 165 aa27.69■■■□□ 2.02
UBXN1-215ENST00000533476 KDM6BO15054 1643 aa27.68■■■□□ 2.02
UBXN1-215ENST00000533476 TONSLQ96HA7 1378 aa27.68■■■□□ 2.02
UBXN1-215ENST00000533476 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
UBXN1-215ENST00000533476 PRG4Q92954 1404 aaPredicted RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms