RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
CDC27-210ENST00000533415 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
CDC27-210ENST00000533415 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
CDC27-210ENST00000533415 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
CDC27-210ENST00000533415 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
CDC27-210ENST00000533415 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
CDC27-210ENST00000533415 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
CDC27-210ENST00000533415 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
CDC27-210ENST00000533415 CTTNBP2Q8WZ74 1663 aa20.97■□□□□ 0.95
CDC27-210ENST00000533415 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
CDC27-210ENST00000533415 APLP2Q06481 763 aa20.95■□□□□ 0.94
CDC27-210ENST00000533415 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
CDC27-210ENST00000533415 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
CDC27-210ENST00000533415 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
CDC27-210ENST00000533415 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
CDC27-210ENST00000533415 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
CDC27-210ENST00000533415 IQGAP2Q13576 1575 aa20.83■□□□□ 0.93
CDC27-210ENST00000533415 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
CDC27-210ENST00000533415 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
CDC27-210ENST00000533415 KIAA0586Q9BVV6 1533 aa20.76■□□□□ 0.91
CDC27-210ENST00000533415 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
CDC27-210ENST00000533415 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
CDC27-210ENST00000533415 CHD1O14646 1710 aa20.73■□□□□ 0.91
CDC27-210ENST00000533415 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
CDC27-210ENST00000533415 DISP1Q96F81 1524 aa20.71■□□□□ 0.91
CDC27-210ENST00000533415 NUP160Q12769 1436 aa20.7■□□□□ 0.9
CDC27-210ENST00000533415 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
CDC27-210ENST00000533415 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
CDC27-210ENST00000533415 CASKIN1Q8WXD9 1431 aa20.65■□□□□ 0.9
CDC27-210ENST00000533415 TIAM1Q13009 1591 aa20.65■□□□□ 0.9
CDC27-210ENST00000533415 ITGAEP38570 1179 aa20.64■□□□□ 0.89
CDC27-210ENST00000533415 KIAA0556O60303 1618 aa20.63■□□□□ 0.89
CDC27-210ENST00000533415 LRRIQ1Q96JM4 1722 aa20.63■□□□□ 0.89
CDC27-210ENST00000533415 FYCO1Q9BQS8 1478 aa20.61■□□□□ 0.89
CDC27-210ENST00000533415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
CDC27-210ENST00000533415 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
CDC27-210ENST00000533415 CDK13Q14004 1512 aaKnown RBP20.59■□□□□ 0.89
CDC27-210ENST00000533415 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
CDC27-210ENST00000533415 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
CDC27-210ENST00000533415 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
CDC27-210ENST00000533415 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
CDC27-210ENST00000533415 HRCP23327 699 aa20.52■□□□□ 0.88
CDC27-210ENST00000533415 MTUS2Q5JR59 1369 aa20.52■□□□□ 0.88
CDC27-210ENST00000533415 CFAP43Q8NDM7 1665 aa20.52■□□□□ 0.88
CDC27-210ENST00000533415 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
CDC27-210ENST00000533415 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
CDC27-210ENST00000533415 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
CDC27-210ENST00000533415 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
CDC27-210ENST00000533415 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
CDC27-210ENST00000533415 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
CDC27-210ENST00000533415 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
CDC27-210ENST00000533415 CCNB3Q8WWL7 1395 aa20.43■□□□□ 0.86
CDC27-210ENST00000533415 PTPRGP23470 1445 aa20.42■□□□□ 0.86
CDC27-210ENST00000533415 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
CDC27-210ENST00000533415 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
CDC27-210ENST00000533415 CLASP1Q7Z460 1538 aa20.38■□□□□ 0.85
CDC27-210ENST00000533415 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
CDC27-210ENST00000533415 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
CDC27-210ENST00000533415 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
CDC27-210ENST00000533415 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
CDC27-210ENST00000533415 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
CDC27-210ENST00000533415 ABCA8O94911 1581 aa20.31■□□□□ 0.84
CDC27-210ENST00000533415 EHBP1L1Q8N3D4 1523 aa20.3■□□□□ 0.84
CDC27-210ENST00000533415 ATP10BO94823 1461 aa20.3■□□□□ 0.84
CDC27-210ENST00000533415 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
CDC27-210ENST00000533415 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
CDC27-210ENST00000533415 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
CDC27-210ENST00000533415 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
CDC27-210ENST00000533415 UACAQ9BZF9 1416 aa20.25■□□□□ 0.83
CDC27-210ENST00000533415 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
CDC27-210ENST00000533415 KIF14Q15058 1648 aa20.24■□□□□ 0.83
CDC27-210ENST00000533415 MYOM3Q5VTT5 1437 aa20.24■□□□□ 0.83
CDC27-210ENST00000533415 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
CDC27-210ENST00000533415 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
CDC27-210ENST00000533415 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
CDC27-210ENST00000533415 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
CDC27-210ENST00000533415 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
CDC27-210ENST00000533415 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
CDC27-210ENST00000533415 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
CDC27-210ENST00000533415 PTPN23Q9H3S7 1636 aa20.14■□□□□ 0.82
CDC27-210ENST00000533415 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
CDC27-210ENST00000533415 ABCC2Q92887 1545 aa20.13■□□□□ 0.81
CDC27-210ENST00000533415 RAB3GAP2Q9H2M9 1393 aa20.12■□□□□ 0.81
CDC27-210ENST00000533415 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
CDC27-210ENST00000533415 ADCY10Q96PN6 1610 aa20.07■□□□□ 0.8
CDC27-210ENST00000533415 CYB5RLQ6IPT4 315 aa20.06■□□□□ 0.8
CDC27-210ENST00000533415 ZCCHC11Q5TAX3 1644 aaKnown RBP20.05■□□□□ 0.8
CDC27-210ENST00000533415 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
CDC27-210ENST00000533415 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
CDC27-210ENST00000533415 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
CDC27-210ENST00000533415 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.89e-6■■■■□ 20.2
CDC27-210ENST00000533415 TCOF1Q13428 1488 aaKnown RBP20■□□□□ 0.79
CDC27-210ENST00000533415 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
CDC27-210ENST00000533415 CAMSAP2Q08AD1 1489 aa20■□□□□ 0.79
CDC27-210ENST00000533415 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
CDC27-210ENST00000533415 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
CDC27-210ENST00000533415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDC27-210ENST00000533415 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
CDC27-210ENST00000533415 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
CDC27-210ENST00000533415 ABCC5O15440 1437 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms