RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 JPH4Q96JJ6 628 aa51.76■■■■■ 5.88
SSSCA1-207ENST00000533115 PRG4Q92954 1404 aaPredicted RBP51.7■■■■■ 5.87
SSSCA1-207ENST00000533115 KIAA0586Q9BVV6 1533 aa51.65■■■■■ 5.86
SSSCA1-207ENST00000533115 TRHP20396 242 aaPredicted RBP51.49■■■■■ 5.83
SSSCA1-207ENST00000533115 RAPGEF2Q9Y4G8 1499 aa51.42■■■■■ 5.82
SSSCA1-207ENST00000533115 IQGAP2Q13576 1575 aa51.27■■■■■ 5.8
SSSCA1-207ENST00000533115 CARMIL2Q6F5E8 1435 aa51.12■■■■■ 5.77
SSSCA1-207ENST00000533115 PRXQ9BXM0 1461 aa51.1■■■■■ 5.77
SSSCA1-207ENST00000533115 PTPRGP23470 1445 aa51.01■■■■■ 5.76
SSSCA1-207ENST00000533115 TNIKQ9UKE5 1360 aa51■■■■■ 5.75
SSSCA1-207ENST00000533115 UGGT2Q9NYU1 1516 aa50.98■■■■■ 5.75
SSSCA1-207ENST00000533115 ADCY10Q96PN6 1610 aa50.97■■■■■ 5.75
SSSCA1-207ENST00000533115 DISP1Q96F81 1524 aa50.96■■■■■ 5.75
SSSCA1-207ENST00000533115 CSRNP3Q8WYN3 585 aa50.94■■■■■ 5.75
SSSCA1-207ENST00000533115 CTTNBP2Q8WZ74 1663 aa50.93■■■■■ 5.74
SSSCA1-207ENST00000533115 NPM1P06748 294 aaKnown RBP eCLIP50.93■■■■■ 5.74
SSSCA1-207ENST00000533115 TTBK1Q5TCY1 1321 aaPredicted RBP50.9■■■■■ 5.74
SSSCA1-207ENST00000533115 EEA1Q15075 1411 aa50.88■■■■■ 5.74
SSSCA1-207ENST00000533115 KIAA0556O60303 1618 aa50.79■■■■■ 5.72
SSSCA1-207ENST00000533115 CHIC1Q5VXU3 224 aa50.76■■■■■ 5.72
SSSCA1-207ENST00000533115 MAPKBP1O60336 1514 aa50.76■■■■■ 5.72
SSSCA1-207ENST00000533115 KIF13AQ9H1H9 1805 aa50.66■■■■■ 5.7
SSSCA1-207ENST00000533115 GOLGA3Q08378 1498 aa50.65■■■■■ 5.7
SSSCA1-207ENST00000533115 UACAQ9BZF9 1416 aa50.65■■■■■ 5.7
SSSCA1-207ENST00000533115 FAM9AQ8IZU1 332 aaPredicted RBP50.64■■■■■ 5.7
SSSCA1-207ENST00000533115 UHRF1BP1LA0JNW5 1464 aa50.64■■■■■ 5.7
SSSCA1-207ENST00000533115 ABCC2Q92887 1545 aa50.62■■■■■ 5.69
SSSCA1-207ENST00000533115 ABCC10Q5T3U5 1492 aa50.61■■■■■ 5.69
SSSCA1-207ENST00000533115 FAM69CQ0P6D2 419 aa50.54■■■■■ 5.68
SSSCA1-207ENST00000533115 DIP2BQ9P265 1576 aa50.5■■■■■ 5.67
SSSCA1-207ENST00000533115 KDM5BQ9UGL1 1544 aa50.4■■■■■ 5.66
SSSCA1-207ENST00000533115 KIF21BO75037 1637 aa50.39■■■■■ 5.66
SSSCA1-207ENST00000533115 ASXL2Q76L83 1435 aa50.36■■■■■ 5.65
SSSCA1-207ENST00000533115 PLB1Q6P1J6 1458 aa50.35■■■■■ 5.65
SSSCA1-207ENST00000533115 P3H3Q8IVL6 736 aa50.28■■■■■ 5.64
SSSCA1-207ENST00000533115 ABCA8O94911 1581 aa50.28■■■■■ 5.64
SSSCA1-207ENST00000533115 ZCCHC11Q5TAX3 1644 aaKnown RBP50.28■■■■■ 5.64
SSSCA1-207ENST00000533115 SAMD9Q5K651 1589 aa50.27■■■■■ 5.64
SSSCA1-207ENST00000533115 RANGAP1P46060 587 aaPredicted RBP50.13■■■■■ 5.62
SSSCA1-207ENST00000533115 GLI2P10070 1586 aa50.13■■■■■ 5.61
SSSCA1-207ENST00000533115 TSPOAP1O95153 1857 aa50.09■■■■■ 5.61
SSSCA1-207ENST00000533115 EPRSP07814 1512 aaKnown RBP50.06■■■■■ 5.6
SSSCA1-207ENST00000533115 EHMT2Q96KQ7 1210 aa50.04■■■■■ 5.6
SSSCA1-207ENST00000533115 WDR7Q9Y4E6 1490 aa50.01■■■■■ 5.6
SSSCA1-207ENST00000533115 UBTFP17480 764 aaKnown RBP50■■■■■ 5.59
SSSCA1-207ENST00000533115 FHOD3Q2V2M9 1422 aa49.96■■■■■ 5.59
SSSCA1-207ENST00000533115 EFCAB5A4FU69 1503 aa49.95■■■■■ 5.59
SSSCA1-207ENST00000533115 RAPGEF6Q8TEU7 1601 aa49.9■■■■■ 5.58
SSSCA1-207ENST00000533115 ATP10BO94823 1461 aa49.87■■■■■ 5.57
SSSCA1-207ENST00000533115 PPRC1Q5VV67 1664 aaKnown RBP49.87■■■■■ 5.57
SSSCA1-207ENST00000533115 MAP3K4Q9Y6R4 1608 aa49.86■■■■■ 5.57
SSSCA1-207ENST00000533115 ARID3CA6NKF2 412 aa49.86■■■■■ 5.57
SSSCA1-207ENST00000533115 KDM6BO15054 1643 aa49.84■■■■■ 5.57
SSSCA1-207ENST00000533115 KCNH8Q96L42 1107 aa49.78■■■■■ 5.56
SSSCA1-207ENST00000533115 NUP153P49790 1475 aaKnown RBP49.72■■■■■ 5.55
SSSCA1-207ENST00000533115 TEX14Q8IWB6 1497 aa49.69■■■■■ 5.54
SSSCA1-207ENST00000533115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP49.64■■■■■ 5.54
SSSCA1-207ENST00000533115 HNRNPUL2Q1KMD3 747 aaKnown RBP49.64■■■■■ 5.54
SSSCA1-207ENST00000533115 CFAP43Q8NDM7 1665 aa49.64■■■■■ 5.54
SSSCA1-207ENST00000533115 CD109Q6YHK3 1445 aa49.62■■■■■ 5.53
SSSCA1-207ENST00000533115 ARHGAP35Q9NRY4 1499 aa49.62■■■■■ 5.53
SSSCA1-207ENST00000533115 MAGI3Q5TCQ9 1506 aa49.55■■■■■ 5.52
SSSCA1-207ENST00000533115 FMN1Q68DA7 1419 aa49.51■■■■■ 5.52
SSSCA1-207ENST00000533115 COL17A1Q9UMD9 1497 aaPredicted RBP49.47■■■■■ 5.51
SSSCA1-207ENST00000533115 ABCA9Q8IUA7 1624 aa49.42■■■■■ 5.5
SSSCA1-207ENST00000533115 PLEKHD1A6NEE1 506 aa49.4■■■■■ 5.5
SSSCA1-207ENST00000533115 HECW1Q76N89 1606 aa49.31■■■■■ 5.48
SSSCA1-207ENST00000533115 CDK13Q14004 1512 aaKnown RBP49.31■■■■■ 5.48
SSSCA1-207ENST00000533115 AEBP2Q6ZN18 517 aaPredicted RBP49.31■■■■■ 5.48
SSSCA1-207ENST00000533115 ATP1B4Q9UN42 357 aaPredicted RBP49.31■■■■■ 5.48
SSSCA1-207ENST00000533115 CLIP1P30622 1438 aa49.15■■■■■ 5.46
SSSCA1-207ENST00000533115 PHLDB1Q86UU1 1377 aa49.14■■■■■ 5.46
SSSCA1-207ENST00000533115 ARAP3Q8WWN8 1544 aa49.14■■■■■ 5.46
SSSCA1-207ENST00000533115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP49.11■■■■■ 5.45
SSSCA1-207ENST00000533115 NEO1Q92859 1461 aa49.09■■■■■ 5.45
SSSCA1-207ENST00000533115 CDK11AQ9UQ88 783 aaPredicted RBP49.08■■■■■ 5.45
SSSCA1-207ENST00000533115 CASKIN1Q8WXD9 1431 aa49.06■■■■■ 5.44
SSSCA1-207ENST00000533115 PCF11O94913 1555 aaKnown RBP49.02■■■■■ 5.44
SSSCA1-207ENST00000533115 TTC37Q6PGP7 1564 aa49.02■■■■■ 5.44
SSSCA1-207ENST00000533115 LRRIQ1Q96JM4 1722 aa49.02■■■■■ 5.44
SSSCA1-207ENST00000533115 KDM4FA0A1W2PPD8 638 aa48.97■■■■■ 5.43
SSSCA1-207ENST00000533115 CCDC18Q5T9S5 1454 aa48.92■■■■■ 5.42
SSSCA1-207ENST00000533115 TROQ12816 1431 aaPredicted RBP48.92■■■■■ 5.42
SSSCA1-207ENST00000533115 FANCAO15360 1455 aa48.9■■■■■ 5.42
SSSCA1-207ENST00000533115 FYCO1Q9BQS8 1478 aa48.9■■■■■ 5.42
SSSCA1-207ENST00000533115 CFAP74Q9C0B2 1584 aa48.87■■■■■ 5.41
SSSCA1-207ENST00000533115 RAPGEF3O95398 923 aa48.87■■■■■ 5.41
SSSCA1-207ENST00000533115 AKNAQ7Z591 1439 aa48.85■■■■■ 5.41
SSSCA1-207ENST00000533115 PLCH2O75038 1416 aa48.83■■■■■ 5.41
SSSCA1-207ENST00000533115 KIF14Q15058 1648 aa48.83■■■■■ 5.41
SSSCA1-207ENST00000533115 CEP162Q5TB80 1403 aa48.79■■■■■ 5.4
SSSCA1-207ENST00000533115 ADGRL1O94910 1474 aa48.79■■■■■ 5.4
SSSCA1-207ENST00000533115 FRMPD1Q5SYB0 1578 aa48.77■■■■■ 5.4
SSSCA1-207ENST00000533115 DENND4BO75064 1496 aaPredicted RBP48.74■■■■■ 5.39
SSSCA1-207ENST00000533115 MYO5CQ9NQX4 1742 aa48.73■■■■■ 5.39
SSSCA1-207ENST00000533115 LOC105371045A0A1W2PR82 267 aa48.69■■■■■ 5.38
SSSCA1-207ENST00000533115 RICTORQ6R327 1708 aa48.66■■■■■ 5.38
SSSCA1-207ENST00000533115 EFCAB2Q5VUJ9 269 aa48.65■■■■■ 5.38
SSSCA1-207ENST00000533115 SCAPERQ9BY12 1400 aa48.58■■■■■ 5.37
SSSCA1-207ENST00000533115 ARHGAP5Q13017 1502 aa48.55■■■■■ 5.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms