RNA–Protein interactions for RNA: ENST00000532718.5

SLC39A4-209, Transcript of solute carrier family 39 member 4, humanhuman

TSL 1 (best)

Gene SLC39A4, Length 668 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-209ENST00000532718 IGF1RP08069 1367 aa26.47■■□□□ 1.83
SLC39A4-209ENST00000532718 CUL7Q14999 1698 aa26.44■■□□□ 1.82
SLC39A4-209ENST00000532718 NPM1P06748 294 aaKnown RBP eCLIP26.44■■□□□ 1.82
SLC39A4-209ENST00000532718 KIAA0586Q9BVV6 1533 aa26.41■■□□□ 1.82
SLC39A4-209ENST00000532718 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
SLC39A4-209ENST00000532718 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
SLC39A4-209ENST00000532718 KIF13AQ9H1H9 1805 aa26.29■■□□□ 1.8
SLC39A4-209ENST00000532718 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
SLC39A4-209ENST00000532718 ADCY10Q96PN6 1610 aa26.23■■□□□ 1.79
SLC39A4-209ENST00000532718 TTBK1Q5TCY1 1321 aaPredicted RBP26.22■■□□□ 1.79
SLC39A4-209ENST00000532718 MAPKBP1O60336 1514 aa26.22■■□□□ 1.79
SLC39A4-209ENST00000532718 ABCC10Q5T3U5 1492 aa26.22■■□□□ 1.79
SLC39A4-209ENST00000532718 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
SLC39A4-209ENST00000532718 PTPRGP23470 1445 aa26.21■■□□□ 1.79
SLC39A4-209ENST00000532718 TNIKQ9UKE5 1360 aa26.15■■□□□ 1.78
SLC39A4-209ENST00000532718 IQGAP2Q13576 1575 aa26.14■■□□□ 1.78
SLC39A4-209ENST00000532718 DIP2BQ9P265 1576 aa26.12■■□□□ 1.77
SLC39A4-209ENST00000532718 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
SLC39A4-209ENST00000532718 ABCC2Q92887 1545 aa26.02■■□□□ 1.76
SLC39A4-209ENST00000532718 TSPOAP1O95153 1857 aa26.01■■□□□ 1.75
SLC39A4-209ENST00000532718 UACAQ9BZF9 1416 aa25.98■■□□□ 1.75
SLC39A4-209ENST00000532718 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
SLC39A4-209ENST00000532718 UHRF1BP1LA0JNW5 1464 aa25.97■■□□□ 1.75
SLC39A4-209ENST00000532718 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
SLC39A4-209ENST00000532718 PLB1Q6P1J6 1458 aa25.96■■□□□ 1.75
SLC39A4-209ENST00000532718 KDM6BO15054 1643 aa25.96■■□□□ 1.75
SLC39A4-209ENST00000532718 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
SLC39A4-209ENST00000532718 KIAA0556O60303 1618 aa25.88■■□□□ 1.73
SLC39A4-209ENST00000532718 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
SLC39A4-209ENST00000532718 GLI2P10070 1586 aa25.85■■□□□ 1.73
SLC39A4-209ENST00000532718 KDM5BQ9UGL1 1544 aa25.83■■□□□ 1.73
SLC39A4-209ENST00000532718 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
SLC39A4-209ENST00000532718 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
SLC39A4-209ENST00000532718 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
SLC39A4-209ENST00000532718 PRXQ9BXM0 1461 aa25.77■■□□□ 1.72
SLC39A4-209ENST00000532718 EPRSP07814 1512 aaKnown RBP25.77■■□□□ 1.72
SLC39A4-209ENST00000532718 PPRC1Q5VV67 1664 aaKnown RBP25.73■■□□□ 1.71
SLC39A4-209ENST00000532718 TEX14Q8IWB6 1497 aa25.71■■□□□ 1.71
SLC39A4-209ENST00000532718 MAP3K4Q9Y6R4 1608 aa25.69■■□□□ 1.7
SLC39A4-209ENST00000532718 WDR7Q9Y4E6 1490 aa25.68■■□□□ 1.7
SLC39A4-209ENST00000532718 KDM4FA0A1W2PPD8 638 aa25.67■■□□□ 1.7
SLC39A4-209ENST00000532718 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
SLC39A4-209ENST00000532718 KCNH8Q96L42 1107 aa25.65■■□□□ 1.7
SLC39A4-209ENST00000532718 ABCA8O94911 1581 aa25.64■■□□□ 1.69
SLC39A4-209ENST00000532718 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
SLC39A4-209ENST00000532718 CD109Q6YHK3 1445 aa25.57■■□□□ 1.68
SLC39A4-209ENST00000532718 COL17A1Q9UMD9 1497 aaPredicted RBP25.57■■□□□ 1.68
SLC39A4-209ENST00000532718 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
SLC39A4-209ENST00000532718 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
SLC39A4-209ENST00000532718 EEA1Q15075 1411 aa25.53■■□□□ 1.68
SLC39A4-209ENST00000532718 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
SLC39A4-209ENST00000532718 ADGRL1O94910 1474 aa25.48■■□□□ 1.67
SLC39A4-209ENST00000532718 RANGAP1P46060 587 aaPredicted RBP25.47■■□□□ 1.67
SLC39A4-209ENST00000532718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.46■■□□□ 1.67
SLC39A4-209ENST00000532718 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
SLC39A4-209ENST00000532718 ATP10BO94823 1461 aa25.46■■□□□ 1.67
SLC39A4-209ENST00000532718 SAMD9Q5K651 1589 aa25.44■■□□□ 1.66
SLC39A4-209ENST00000532718 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
SLC39A4-209ENST00000532718 FHOD3Q2V2M9 1422 aa25.32■■□□□ 1.64
SLC39A4-209ENST00000532718 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
SLC39A4-209ENST00000532718 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
SLC39A4-209ENST00000532718 ARAP3Q8WWN8 1544 aa25.31■■□□□ 1.64
SLC39A4-209ENST00000532718 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
SLC39A4-209ENST00000532718 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
SLC39A4-209ENST00000532718 KIF21BO75037 1637 aa25.27■■□□□ 1.64
SLC39A4-209ENST00000532718 EFCAB5A4FU69 1503 aa25.24■■□□□ 1.63
SLC39A4-209ENST00000532718 UBTFP17480 764 aaKnown RBP25.23■■□□□ 1.63
SLC39A4-209ENST00000532718 NEO1Q92859 1461 aa25.22■■□□□ 1.63
SLC39A4-209ENST00000532718 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
SLC39A4-209ENST00000532718 RAPGEF3O95398 923 aa25.2■■□□□ 1.62
SLC39A4-209ENST00000532718 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
SLC39A4-209ENST00000532718 ATP1B4Q9UN42 357 aaPredicted RBP25.13■■□□□ 1.61
SLC39A4-209ENST00000532718 HECW2Q9P2P5 1572 aa25.11■■□□□ 1.61
SLC39A4-209ENST00000532718 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
SLC39A4-209ENST00000532718 DENND4BO75064 1496 aaPredicted RBP25.07■■□□□ 1.6
SLC39A4-209ENST00000532718 CFAP74Q9C0B2 1584 aa25.06■■□□□ 1.6
SLC39A4-209ENST00000532718 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
SLC39A4-209ENST00000532718 AKNAQ7Z591 1439 aa25.06■■□□□ 1.6
SLC39A4-209ENST00000532718 FANCAO15360 1455 aa25.06■■□□□ 1.6
SLC39A4-209ENST00000532718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.06■■□□□ 1.64e-8■■■■■ 66.4
SLC39A4-209ENST00000532718 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
SLC39A4-209ENST00000532718 FRMPD1Q5SYB0 1578 aa25.03■■□□□ 1.6
SLC39A4-209ENST00000532718 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
SLC39A4-209ENST00000532718 TTC37Q6PGP7 1564 aa25.01■■□□□ 1.59
SLC39A4-209ENST00000532718 HECW1Q76N89 1606 aa25■■□□□ 1.59
SLC39A4-209ENST00000532718 ADAMTSL3P82987 1691 aa24.98■■□□□ 1.59
SLC39A4-209ENST00000532718 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
SLC39A4-209ENST00000532718 PTPRMP28827 1452 aa24.97■■□□□ 1.59
SLC39A4-209ENST00000532718 RICTORQ6R327 1708 aa24.97■■□□□ 1.59
SLC39A4-209ENST00000532718 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.59
SLC39A4-209ENST00000532718 ARHGEF40Q8TER5 1519 aa24.95■■□□□ 1.58
SLC39A4-209ENST00000532718 ILDR1Q86SU0 546 aaPredicted RBP24.94■■□□□ 1.58
SLC39A4-209ENST00000532718 PLCH2O75038 1416 aa24.94■■□□□ 1.58
SLC39A4-209ENST00000532718 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
SLC39A4-209ENST00000532718 POGZQ7Z3K3 1410 aa24.91■■□□□ 1.58
SLC39A4-209ENST00000532718 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
SLC39A4-209ENST00000532718 ZFYVE16Q7Z3T8 1539 aa24.89■■□□□ 1.57
SLC39A4-209ENST00000532718 MADDQ8WXG6 1647 aa24.89■■□□□ 1.57
SLC39A4-209ENST00000532718 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
SLC39A4-209ENST00000532718 MAGI2Q86UL8 1455 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms