RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	PRG4	Q92954	1404 aa	Predicted RBP	29.38	■■■□□ 2.29
CTSB-223	ENST00000532370	KIAA0586	Q9BVV6	1533 aa		29.37	■■■□□ 2.29
CTSB-223	ENST00000532370	CHIC1	Q5VXU3	224 aa		29.37	■■■□□ 2.29
CTSB-223	ENST00000532370	SHROOM2	Q13796	1616 aa		29.37	■■■□□ 2.29
CTSB-223	ENST00000532370	RAPGEF2	Q9Y4G8	1499 aa		29.34	■■■□□ 2.29
CTSB-223	ENST00000532370	CSRNP3	Q8WYN3	585 aa		29.25	■■■□□ 2.27
CTSB-223	ENST00000532370	PRX	Q9BXM0	1461 aa		29.23	■■■□□ 2.27
CTSB-223	ENST00000532370	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.22	■■■□□ 2.27
CTSB-223	ENST00000532370	IQGAP2	Q13576	1575 aa		29.13	■■■□□ 2.25
CTSB-223	ENST00000532370	EEA1	Q15075	1411 aa		29.11	■■■□□ 2.25
CTSB-223	ENST00000532370	TRH	P20396	242 aa	Predicted RBP	29.08	■■■□□ 2.25
CTSB-223	ENST00000532370	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.08	■■■□□ 2.25
CTSB-223	ENST00000532370	CARMIL2	Q6F5E8	1435 aa		29.04	■■■□□ 2.24
CTSB-223	ENST00000532370	PTPRG	P23470	1445 aa		29.03	■■■□□ 2.24
CTSB-223	ENST00000532370	DISP1	Q96F81	1524 aa		29.02	■■■□□ 2.24
CTSB-223	ENST00000532370	TNIK	Q9UKE5	1360 aa		29.01	■■■□□ 2.23
CTSB-223	ENST00000532370	UGGT2	Q9NYU1	1516 aa		28.99	■■■□□ 2.23
CTSB-223	ENST00000532370	EHMT2	Q96KQ7	1210 aa		28.9	■■■□□ 2.22
CTSB-223	ENST00000532370	CTTNBP2	Q8WZ74	1663 aa		28.87	■■■□□ 2.21
CTSB-223	ENST00000532370	NPM1	P06748	294 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
CTSB-223	ENST00000532370	ADCY10	Q96PN6	1610 aa		28.87	■■■□□ 2.21
CTSB-223	ENST00000532370	KIAA0556	O60303	1618 aa		28.86	■■■□□ 2.21
CTSB-223	ENST00000532370	RANGAP1	P46060	587 aa	Predicted RBP	28.82	■■■□□ 2.2
CTSB-223	ENST00000532370	P3H3	Q8IVL6	736 aa		28.82	■■■□□ 2.2
CTSB-223	ENST00000532370	GOLGA3	Q08378	1498 aa		28.81	■■■□□ 2.2
CTSB-223	ENST00000532370	UACA	Q9BZF9	1416 aa		28.79	■■■□□ 2.2
CTSB-223	ENST00000532370	KIF21B	O75037	1637 aa		28.79	■■■□□ 2.2
CTSB-223	ENST00000532370	UBTF	P17480	764 aa	Known RBP	28.74	■■■□□ 2.19
CTSB-223	ENST00000532370	UHRF1BP1L	A0JNW5	1464 aa		28.72	■■■□□ 2.19
CTSB-223	ENST00000532370	ABCC2	Q92887	1545 aa		28.72	■■■□□ 2.19
CTSB-223	ENST00000532370	PLB1	Q6P1J6	1458 aa		28.7	■■■□□ 2.18
CTSB-223	ENST00000532370	MAPKBP1	O60336	1514 aa		28.68	■■■□□ 2.18
CTSB-223	ENST00000532370	FAM69C	Q0P6D2	419 aa		28.67	■■■□□ 2.18
CTSB-223	ENST00000532370	ABCC10	Q5T3U5	1492 aa		28.63	■■■□□ 2.17
CTSB-223	ENST00000532370	SAMD9	Q5K651	1589 aa		28.62	■■■□□ 2.17
CTSB-223	ENST00000532370	KDM5B	Q9UGL1	1544 aa		28.6	■■■□□ 2.17
CTSB-223	ENST00000532370	ASXL2	Q76L83	1435 aa		28.6	■■■□□ 2.17
CTSB-223	ENST00000532370	FHOD3	Q2V2M9	1422 aa		28.58	■■■□□ 2.17
CTSB-223	ENST00000532370	ABCA8	O94911	1581 aa		28.58	■■■□□ 2.17
CTSB-223	ENST00000532370	ARID3C	A6NKF2	412 aa		28.55	■■■□□ 2.16
CTSB-223	ENST00000532370	DIP2B	Q9P265	1576 aa		28.51	■■■□□ 2.15
CTSB-223	ENST00000532370	KIF13A	Q9H1H9	1805 aa		28.48	■■■□□ 2.15
CTSB-223	ENST00000532370	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.47	■■■□□ 2.15
CTSB-223	ENST00000532370	EFCAB5	A4FU69	1503 aa		28.46	■■■□□ 2.15
CTSB-223	ENST00000532370	ATP10B	O94823	1461 aa		28.41	■■■□□ 2.14
CTSB-223	ENST00000532370	ARHGAP35	Q9NRY4	1499 aa		28.41	■■■□□ 2.14
CTSB-223	ENST00000532370	EPRS	P07814	1512 aa	Known RBP	28.39	■■■□□ 2.14
CTSB-223	ENST00000532370	KCNH8	Q96L42	1107 aa		28.39	■■■□□ 2.14
CTSB-223	ENST00000532370	WDR7	Q9Y4E6	1490 aa		28.39	■■■□□ 2.13
CTSB-223	ENST00000532370	NUP153	P49790	1475 aa	Known RBP	28.36	■■■□□ 2.13
CTSB-223	ENST00000532370	RAPGEF6	Q8TEU7	1601 aa		28.36	■■■□□ 2.13
CTSB-223	ENST00000532370	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.35	■■■□□ 2.13
CTSB-223	ENST00000532370	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.35	■■■□□ 2.13
CTSB-223	ENST00000532370	GLI2	P10070	1586 aa		28.33	■■■□□ 2.12
CTSB-223	ENST00000532370	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.27	■■■□□ 2.12
CTSB-223	ENST00000532370	FMN1	Q68DA7	1419 aa		28.26	■■■□□ 2.12
CTSB-223	ENST00000532370	LOC105371045	A0A1W2PR82	267 aa		28.24	■■■□□ 2.11
CTSB-223	ENST00000532370	TSPOAP1	O95153	1857 aa		28.22	■■■□□ 2.11
CTSB-223	ENST00000532370	CLIP1	P30622	1438 aa		28.22	■■■□□ 2.11
CTSB-223	ENST00000532370	PLEKHD1	A6NEE1	506 aa		28.18	■■■□□ 2.1
CTSB-223	ENST00000532370	CD109	Q6YHK3	1445 aa		28.18	■■■□□ 2.1
CTSB-223	ENST00000532370	MAP3K4	Q9Y6R4	1608 aa		28.17	■■■□□ 2.1
CTSB-223	ENST00000532370	CDK13	Q14004	1512 aa	Known RBP	28.15	■■■□□ 2.1
CTSB-223	ENST00000532370	PPRC1	Q5VV67	1664 aa	Known RBP	28.15	■■■□□ 2.1
CTSB-223	ENST00000532370	TEX14	Q8IWB6	1497 aa		28.08	■■■□□ 2.09
CTSB-223	ENST00000532370	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.08	■■■□□ 2.09
CTSB-223	ENST00000532370	CEP162	Q5TB80	1403 aa		28.07	■■■□□ 2.08
CTSB-223	ENST00000532370	MAGI3	Q5TCQ9	1506 aa		28.07	■■■□□ 2.08
CTSB-223	ENST00000532370	KDM6B	O15054	1643 aa		28.07	■■■□□ 2.08
CTSB-223	ENST00000532370	HECW1	Q76N89	1606 aa		28.07	■■■□□ 2.08
CTSB-223	ENST00000532370	CASKIN1	Q8WXD9	1431 aa		28.06	■■■□□ 2.08
CTSB-223	ENST00000532370	CFAP43	Q8NDM7	1665 aa		28.02	■■■□□ 2.08
CTSB-223	ENST00000532370	CDK11A	Q9UQ88	783 aa	Predicted RBP	28	■■■□□ 2.07
CTSB-223	ENST00000532370	ABCA9	Q8IUA7	1624 aa		28	■■■□□ 2.07
CTSB-223	ENST00000532370	PCF11	O94913	1555 aa	Known RBP	27.99	■■■□□ 2.07
CTSB-223	ENST00000532370	FYCO1	Q9BQS8	1478 aa		27.94	■■■□□ 2.06
CTSB-223	ENST00000532370	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.93	■■■□□ 2.06
CTSB-223	ENST00000532370	TRO	Q12816	1431 aa	Predicted RBP	27.91	■■■□□ 2.06
CTSB-223	ENST00000532370	CCDC18	Q5T9S5	1454 aa		27.89	■■■□□ 2.06
CTSB-223	ENST00000532370	LRRIQ1	Q96JM4	1722 aa		27.89	■■■□□ 2.05
CTSB-223	ENST00000532370	TTC37	Q6PGP7	1564 aa		27.87	■■■□□ 2.05
CTSB-223	ENST00000532370	PHLDB1	Q86UU1	1377 aa		27.84	■■■□□ 2.05
CTSB-223	ENST00000532370	NEO1	Q92859	1461 aa		27.83	■■■□□ 2.05
CTSB-223	ENST00000532370	RAPGEF3	O95398	923 aa		27.83	■■■□□ 2.05
CTSB-223	ENST00000532370	ARAP3	Q8WWN8	1544 aa		27.82	■■■□□ 2.04
CTSB-223	ENST00000532370	PLCH2	O75038	1416 aa		27.81	■■■□□ 2.04
CTSB-223	ENST00000532370	KIF14	Q15058	1648 aa		27.81	■■■□□ 2.04
CTSB-223	ENST00000532370	FANCA	O15360	1455 aa		27.8	■■■□□ 2.04
CTSB-223	ENST00000532370	AKNA	Q7Z591	1439 aa		27.78	■■■□□ 2.04
CTSB-223	ENST00000532370	EFCAB2	Q5VUJ9	269 aa		27.73	■■■□□ 2.03
CTSB-223	ENST00000532370	VPS8	Q8N3P4	1428 aa		27.71	■■■□□ 2.03
CTSB-223	ENST00000532370	MTUS2	Q5JR59	1369 aa		27.69	■■■□□ 2.02
CTSB-223	ENST00000532370	KDM4F	A0A1W2PPD8	638 aa		27.68	■■■□□ 2.02
CTSB-223	ENST00000532370	DENND4B	O75064	1496 aa	Predicted RBP	27.68	■■■□□ 2.02
CTSB-223	ENST00000532370	SCAPER	Q9BY12	1400 aa		27.66	■■■□□ 2.02
CTSB-223	ENST00000532370	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.65	■■■□□ 2.02
CTSB-223	ENST00000532370	ADGRL1	O94910	1474 aa		27.64	■■■□□ 2.02
CTSB-223	ENST00000532370	ARHGAP5	Q13017	1502 aa		27.63	■■■□□ 2.01
CTSB-223	ENST00000532370	FRMPD1	Q5SYB0	1578 aa		27.63	■■■□□ 2.01
CTSB-223	ENST00000532370	CFAP74	Q9C0B2	1584 aa		27.61	■■■□□ 2.01

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