RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
GEN1-205ENST00000532257 FBXO41Q8TF61 875 aa19.34■□□□□ 0.69
GEN1-205ENST00000532257 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
GEN1-205ENST00000532257 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
GEN1-205ENST00000532257 PRG4Q92954 1404 aaPredicted RBP19.23■□□□□ 0.67
GEN1-205ENST00000532257 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
GEN1-205ENST00000532257 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
GEN1-205ENST00000532257 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
GEN1-205ENST00000532257 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
GEN1-205ENST00000532257 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
GEN1-205ENST00000532257 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
GEN1-205ENST00000532257 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
GEN1-205ENST00000532257 SOCS7O14512 581 aa19■□□□□ 0.63
GEN1-205ENST00000532257 COL17A1Q9UMD9 1497 aaPredicted RBP19■□□□□ 0.63
GEN1-205ENST00000532257 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
GEN1-205ENST00000532257 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
GEN1-205ENST00000532257 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
GEN1-205ENST00000532257 GLI2P10070 1586 aa18.95■□□□□ 0.62
GEN1-205ENST00000532257 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
GEN1-205ENST00000532257 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
GEN1-205ENST00000532257 DISP3Q9P2K9 1392 aa18.87■□□□□ 0.61
GEN1-205ENST00000532257 MAP3K4Q9Y6R4 1608 aa18.86■□□□□ 0.61
GEN1-205ENST00000532257 PLB1Q6P1J6 1458 aa18.85■□□□□ 0.61
GEN1-205ENST00000532257 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
GEN1-205ENST00000532257 CUL7Q14999 1698 aa18.83■□□□□ 0.61
GEN1-205ENST00000532257 TEX14Q8IWB6 1497 aa18.83■□□□□ 0.6
GEN1-205ENST00000532257 KIF21BO75037 1637 aa18.79■□□□□ 0.6
GEN1-205ENST00000532257 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
GEN1-205ENST00000532257 EPRSP07814 1512 aaKnown RBP18.77■□□□□ 0.6
GEN1-205ENST00000532257 PTPRGP23470 1445 aa18.75■□□□□ 0.59
GEN1-205ENST00000532257 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
GEN1-205ENST00000532257 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
GEN1-205ENST00000532257 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
GEN1-205ENST00000532257 SPATA31D1Q6ZQQ2 1576 aa18.71■□□□□ 0.59
GEN1-205ENST00000532257 PTPRMP28827 1452 aa18.7■□□□□ 0.58
GEN1-205ENST00000532257 UHRF1BP1LA0JNW5 1464 aa18.66■□□□□ 0.58
GEN1-205ENST00000532257 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
GEN1-205ENST00000532257 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
GEN1-205ENST00000532257 CERKQ8TCT0 537 aa18.63■□□□□ 0.57
GEN1-205ENST00000532257 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
GEN1-205ENST00000532257 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
GEN1-205ENST00000532257 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
GEN1-205ENST00000532257 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
GEN1-205ENST00000532257 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
GEN1-205ENST00000532257 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
GEN1-205ENST00000532257 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
GEN1-205ENST00000532257 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
GEN1-205ENST00000532257 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.55
GEN1-205ENST00000532257 HSPA2P54652 639 aa18.51■□□□□ 0.55
GEN1-205ENST00000532257 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
GEN1-205ENST00000532257 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
GEN1-205ENST00000532257 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
GEN1-205ENST00000532257 RIMS1Q86UR5 1692 aaKnown RBP18.46■□□□□ 0.55
GEN1-205ENST00000532257 DISP1Q96F81 1524 aa18.44■□□□□ 0.54
GEN1-205ENST00000532257 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
GEN1-205ENST00000532257 IGF1RP08069 1367 aa18.42■□□□□ 0.54
GEN1-205ENST00000532257 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
GEN1-205ENST00000532257 KCNH8Q96L42 1107 aa18.35■□□□□ 0.53
GEN1-205ENST00000532257 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
GEN1-205ENST00000532257 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
GEN1-205ENST00000532257 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
GEN1-205ENST00000532257 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
GEN1-205ENST00000532257 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
GEN1-205ENST00000532257 UGGT2Q9NYU1 1516 aa18.28■□□□□ 0.52
GEN1-205ENST00000532257 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
GEN1-205ENST00000532257 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
GEN1-205ENST00000532257 STRCQ7RTU9 1775 aa18.24■□□□□ 0.51
GEN1-205ENST00000532257 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
GEN1-205ENST00000532257 PHLDB1Q86UU1 1377 aa18.21■□□□□ 0.51
GEN1-205ENST00000532257 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
GEN1-205ENST00000532257 ABCA8O94911 1581 aa18.21■□□□□ 0.51
GEN1-205ENST00000532257 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
GEN1-205ENST00000532257 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
GEN1-205ENST00000532257 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
GEN1-205ENST00000532257 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
GEN1-205ENST00000532257 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
GEN1-205ENST00000532257 NEO1Q92859 1461 aa18.16■□□□□ 0.5
GEN1-205ENST00000532257 POGZQ7Z3K3 1410 aa18.15■□□□□ 0.5
GEN1-205ENST00000532257 FANCAO15360 1455 aa18.14■□□□□ 0.5
GEN1-205ENST00000532257 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
GEN1-205ENST00000532257 IQSEC2Q5JU85 1478 aa18.12■□□□□ 0.49
GEN1-205ENST00000532257 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
GEN1-205ENST00000532257 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
GEN1-205ENST00000532257 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
GEN1-205ENST00000532257 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
GEN1-205ENST00000532257 PTPRTO14522 1441 aa18.06■□□□□ 0.48
GEN1-205ENST00000532257 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
GEN1-205ENST00000532257 MLECQ14165 292 aa18.05■□□□□ 0.48
GEN1-205ENST00000532257 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
GEN1-205ENST00000532257 DENND4BO75064 1496 aaPredicted RBP18.03■□□□□ 0.48
GEN1-205ENST00000532257 RAPGEF2Q9Y4G8 1499 aa18.02■□□□□ 0.48
GEN1-205ENST00000532257 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.47
GEN1-205ENST00000532257 EFCAB5A4FU69 1503 aa18.02■□□□□ 0.47
GEN1-205ENST00000532257 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
GEN1-205ENST00000532257 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
GEN1-205ENST00000532257 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
GEN1-205ENST00000532257 ATP10BO94823 1461 aa18.01■□□□□ 0.47
GEN1-205ENST00000532257 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
GEN1-205ENST00000532257 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
GEN1-205ENST00000532257 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms