RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
AMBRA1-210ENST00000531542 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
AMBRA1-210ENST00000531542 CUL7Q14999 1698 aa23.18■■□□□ 1.3
AMBRA1-210ENST00000531542 CARMIL1Q5VZK9 1371 aa23.12■■□□□ 1.29
AMBRA1-210ENST00000531542 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
AMBRA1-210ENST00000531542 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
AMBRA1-210ENST00000531542 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
AMBRA1-210ENST00000531542 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
AMBRA1-210ENST00000531542 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
AMBRA1-210ENST00000531542 PTPRGP23470 1445 aa22.94■■□□□ 1.26
AMBRA1-210ENST00000531542 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
AMBRA1-210ENST00000531542 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
AMBRA1-210ENST00000531542 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
AMBRA1-210ENST00000531542 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
AMBRA1-210ENST00000531542 FAM69CQ0P6D2 419 aa22.9■■□□□ 1.26
AMBRA1-210ENST00000531542 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
AMBRA1-210ENST00000531542 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
AMBRA1-210ENST00000531542 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
AMBRA1-210ENST00000531542 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
AMBRA1-210ENST00000531542 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
AMBRA1-210ENST00000531542 UACAQ9BZF9 1416 aa22.77■■□□□ 1.24
AMBRA1-210ENST00000531542 PLB1Q6P1J6 1458 aa22.74■■□□□ 1.23
AMBRA1-210ENST00000531542 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
AMBRA1-210ENST00000531542 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
AMBRA1-210ENST00000531542 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
AMBRA1-210ENST00000531542 ASXL2Q76L83 1435 aa22.7■■□□□ 1.22
AMBRA1-210ENST00000531542 KIAA0556O60303 1618 aa22.69■■□□□ 1.22
AMBRA1-210ENST00000531542 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
AMBRA1-210ENST00000531542 GLI2P10070 1586 aa22.67■■□□□ 1.22
AMBRA1-210ENST00000531542 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
AMBRA1-210ENST00000531542 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
AMBRA1-210ENST00000531542 KDM6BO15054 1643 aa22.58■■□□□ 1.21
AMBRA1-210ENST00000531542 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
AMBRA1-210ENST00000531542 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
AMBRA1-210ENST00000531542 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
AMBRA1-210ENST00000531542 EEA1Q15075 1411 aa22.52■■□□□ 1.2
AMBRA1-210ENST00000531542 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
AMBRA1-210ENST00000531542 ABCA8O94911 1581 aa22.51■■□□□ 1.19
AMBRA1-210ENST00000531542 WDR7Q9Y4E6 1490 aa22.5■■□□□ 1.19
AMBRA1-210ENST00000531542 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
AMBRA1-210ENST00000531542 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
AMBRA1-210ENST00000531542 MAP3K4Q9Y6R4 1608 aa22.48■■□□□ 1.19
AMBRA1-210ENST00000531542 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
AMBRA1-210ENST00000531542 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
AMBRA1-210ENST00000531542 KDM4FA0A1W2PPD8 638 aa22.4■■□□□ 1.18
AMBRA1-210ENST00000531542 MAGI3Q5TCQ9 1506 aa22.38■■□□□ 1.17
AMBRA1-210ENST00000531542 SAMD9Q5K651 1589 aa22.37■■□□□ 1.17
AMBRA1-210ENST00000531542 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
AMBRA1-210ENST00000531542 ATP10BO94823 1461 aa22.34■■□□□ 1.17
AMBRA1-210ENST00000531542 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
AMBRA1-210ENST00000531542 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
AMBRA1-210ENST00000531542 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
AMBRA1-210ENST00000531542 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
AMBRA1-210ENST00000531542 KIF21BO75037 1637 aa22.24■■□□□ 1.15
AMBRA1-210ENST00000531542 RAPGEF6Q8TEU7 1601 aa22.24■■□□□ 1.15
AMBRA1-210ENST00000531542 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
AMBRA1-210ENST00000531542 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
AMBRA1-210ENST00000531542 ARID3CA6NKF2 412 aa22.2■■□□□ 1.14
AMBRA1-210ENST00000531542 EFCAB5A4FU69 1503 aa22.2■■□□□ 1.14
AMBRA1-210ENST00000531542 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
AMBRA1-210ENST00000531542 ADGRL1O94910 1474 aa22.19■■□□□ 1.14
AMBRA1-210ENST00000531542 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
AMBRA1-210ENST00000531542 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
AMBRA1-210ENST00000531542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
AMBRA1-210ENST00000531542 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
AMBRA1-210ENST00000531542 NEO1Q92859 1461 aa22.13■■□□□ 1.13
AMBRA1-210ENST00000531542 PLEKHD1A6NEE1 506 aa22.12■■□□□ 1.13
AMBRA1-210ENST00000531542 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
AMBRA1-210ENST00000531542 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
AMBRA1-210ENST00000531542 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
AMBRA1-210ENST00000531542 RAPGEF3O95398 923 aa22■■□□□ 1.11
AMBRA1-210ENST00000531542 ARHGAP35Q9NRY4 1499 aa21.98■■□□□ 1.11
AMBRA1-210ENST00000531542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.97■■□□□ 1.11
AMBRA1-210ENST00000531542 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
AMBRA1-210ENST00000531542 FANCAO15360 1455 aa21.95■■□□□ 1.1
AMBRA1-210ENST00000531542 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
AMBRA1-210ENST00000531542 FRMPD1Q5SYB0 1578 aa21.92■■□□□ 1.1
AMBRA1-210ENST00000531542 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
AMBRA1-210ENST00000531542 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
AMBRA1-210ENST00000531542 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
AMBRA1-210ENST00000531542 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
AMBRA1-210ENST00000531542 PLCH2O75038 1416 aa21.9■■□□□ 1.1
AMBRA1-210ENST00000531542 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.09
AMBRA1-210ENST00000531542 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
AMBRA1-210ENST00000531542 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
AMBRA1-210ENST00000531542 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
AMBRA1-210ENST00000531542 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
AMBRA1-210ENST00000531542 ADAMTSL3P82987 1691 aa21.84■■□□□ 1.09
AMBRA1-210ENST00000531542 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
AMBRA1-210ENST00000531542 HECW2Q9P2P5 1572 aa21.83■■□□□ 1.09
AMBRA1-210ENST00000531542 TROQ12816 1431 aaPredicted RBP21.82■■□□□ 1.08
AMBRA1-210ENST00000531542 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
AMBRA1-210ENST00000531542 EFCAB2Q5VUJ9 269 aa21.81■■□□□ 1.08
AMBRA1-210ENST00000531542 PTPRMP28827 1452 aa21.81■■□□□ 1.08
AMBRA1-210ENST00000531542 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
AMBRA1-210ENST00000531542 SCAPERQ9BY12 1400 aa21.79■■□□□ 1.08
AMBRA1-210ENST00000531542 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
AMBRA1-210ENST00000531542 CLIP1P30622 1438 aa21.78■■□□□ 1.08
AMBRA1-210ENST00000531542 POGZQ7Z3K3 1410 aa21.78■■□□□ 1.08
AMBRA1-210ENST00000531542 BCORL1Q5H9F3 1711 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms