RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
TM9SF1-211ENST00000531406 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
TM9SF1-211ENST00000531406 CUL7Q14999 1698 aa22.28■■□□□ 1.16
TM9SF1-211ENST00000531406 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
TM9SF1-211ENST00000531406 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
TM9SF1-211ENST00000531406 FAM69CQ0P6D2 419 aa22.19■■□□□ 1.14
TM9SF1-211ENST00000531406 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
TM9SF1-211ENST00000531406 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
TM9SF1-211ENST00000531406 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
TM9SF1-211ENST00000531406 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
TM9SF1-211ENST00000531406 PTPRGP23470 1445 aa22.14■■□□□ 1.14
TM9SF1-211ENST00000531406 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
TM9SF1-211ENST00000531406 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
TM9SF1-211ENST00000531406 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
TM9SF1-211ENST00000531406 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
TM9SF1-211ENST00000531406 DIP2BQ9P265 1576 aa22.07■■□□□ 1.12
TM9SF1-211ENST00000531406 IQGAP2Q13576 1575 aa22.06■■□□□ 1.12
TM9SF1-211ENST00000531406 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
TM9SF1-211ENST00000531406 ABCC2Q92887 1545 aa22■■□□□ 1.11
TM9SF1-211ENST00000531406 DISP1Q96F81 1524 aa22■■□□□ 1.11
TM9SF1-211ENST00000531406 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
TM9SF1-211ENST00000531406 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
TM9SF1-211ENST00000531406 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
TM9SF1-211ENST00000531406 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
TM9SF1-211ENST00000531406 PLB1Q6P1J6 1458 aa21.92■■□□□ 1.1
TM9SF1-211ENST00000531406 KDM6BO15054 1643 aa21.88■■□□□ 1.09
TM9SF1-211ENST00000531406 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
TM9SF1-211ENST00000531406 KIAA0556O60303 1618 aa21.85■■□□□ 1.09
TM9SF1-211ENST00000531406 GLI2P10070 1586 aa21.84■■□□□ 1.09
TM9SF1-211ENST00000531406 PRXQ9BXM0 1461 aa21.83■■□□□ 1.08
TM9SF1-211ENST00000531406 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
TM9SF1-211ENST00000531406 EPRSP07814 1512 aaKnown RBP21.79■■□□□ 1.08
TM9SF1-211ENST00000531406 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
TM9SF1-211ENST00000531406 ZCCHC11Q5TAX3 1644 aaKnown RBP21.75■■□□□ 1.07
TM9SF1-211ENST00000531406 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
TM9SF1-211ENST00000531406 PPRC1Q5VV67 1664 aaKnown RBP21.73■■□□□ 1.07
TM9SF1-211ENST00000531406 CTTNBP2Q8WZ74 1663 aa21.73■■□□□ 1.07
TM9SF1-211ENST00000531406 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
TM9SF1-211ENST00000531406 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
TM9SF1-211ENST00000531406 COL17A1Q9UMD9 1497 aaPredicted RBP21.69■■□□□ 1.06
TM9SF1-211ENST00000531406 ABCA8O94911 1581 aa21.69■■□□□ 1.06
TM9SF1-211ENST00000531406 MAP3K4Q9Y6R4 1608 aa21.68■■□□□ 1.06
TM9SF1-211ENST00000531406 TEX14Q8IWB6 1497 aa21.67■■□□□ 1.06
TM9SF1-211ENST00000531406 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
TM9SF1-211ENST00000531406 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
TM9SF1-211ENST00000531406 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
TM9SF1-211ENST00000531406 CD109Q6YHK3 1445 aa21.6■■□□□ 1.05
TM9SF1-211ENST00000531406 ARID3CA6NKF2 412 aa21.57■■□□□ 1.04
TM9SF1-211ENST00000531406 MAGI3Q5TCQ9 1506 aa21.56■■□□□ 1.04
TM9SF1-211ENST00000531406 EEA1Q15075 1411 aa21.55■■□□□ 1.04
TM9SF1-211ENST00000531406 ATP10BO94823 1461 aa21.54■■□□□ 1.04
TM9SF1-211ENST00000531406 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
TM9SF1-211ENST00000531406 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
TM9SF1-211ENST00000531406 SAMD9Q5K651 1589 aa21.5■■□□□ 1.03
TM9SF1-211ENST00000531406 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-211ENST00000531406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
TM9SF1-211ENST00000531406 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
TM9SF1-211ENST00000531406 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
TM9SF1-211ENST00000531406 FHOD3Q2V2M9 1422 aa21.41■■□□□ 1.02
TM9SF1-211ENST00000531406 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.02
TM9SF1-211ENST00000531406 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.02
TM9SF1-211ENST00000531406 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
TM9SF1-211ENST00000531406 ABCA9Q8IUA7 1624 aa21.37■■□□□ 1.01
TM9SF1-211ENST00000531406 KIF21BO75037 1637 aa21.33■■□□□ 1
TM9SF1-211ENST00000531406 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
TM9SF1-211ENST00000531406 RAPGEF3O95398 923 aa21.31■■□□□ 1
TM9SF1-211ENST00000531406 NEO1Q92859 1461 aa21.31■■□□□ 1
TM9SF1-211ENST00000531406 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
TM9SF1-211ENST00000531406 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
TM9SF1-211ENST00000531406 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
TM9SF1-211ENST00000531406 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
TM9SF1-211ENST00000531406 HECW2Q9P2P5 1572 aa21.2■□□□□ 0.98
TM9SF1-211ENST00000531406 AKNAQ7Z591 1439 aa21.18■□□□□ 0.98
TM9SF1-211ENST00000531406 FRMPD1Q5SYB0 1578 aa21.18■□□□□ 0.98
TM9SF1-211ENST00000531406 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
TM9SF1-211ENST00000531406 CDK13Q14004 1512 aaKnown RBP21.17■□□□□ 0.98
TM9SF1-211ENST00000531406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.17■□□□□ 0.98
TM9SF1-211ENST00000531406 FANCAO15360 1455 aa21.16■□□□□ 0.98
TM9SF1-211ENST00000531406 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
TM9SF1-211ENST00000531406 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.98
TM9SF1-211ENST00000531406 FMN1Q68DA7 1419 aa21.14■□□□□ 0.98
TM9SF1-211ENST00000531406 ARID4BQ4LE39 1312 aaPredicted RBP21.14■□□□□ 0.97
TM9SF1-211ENST00000531406 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
TM9SF1-211ENST00000531406 ADAMTSL3P82987 1691 aa21.1■□□□□ 0.97
TM9SF1-211ENST00000531406 PTPRMP28827 1452 aa21.1■□□□□ 0.97
TM9SF1-211ENST00000531406 ILDR1Q86SU0 546 aaPredicted RBP21.09■□□□□ 0.97
TM9SF1-211ENST00000531406 CFAP74Q9C0B2 1584 aa21.09■□□□□ 0.97
TM9SF1-211ENST00000531406 PLCH2O75038 1416 aa21.08■□□□□ 0.97
TM9SF1-211ENST00000531406 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.97
TM9SF1-211ENST00000531406 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
TM9SF1-211ENST00000531406 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
TM9SF1-211ENST00000531406 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
TM9SF1-211ENST00000531406 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
TM9SF1-211ENST00000531406 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
TM9SF1-211ENST00000531406 BCORL1Q5H9F3 1711 aa21.04■□□□□ 0.96
TM9SF1-211ENST00000531406 ZMYM4Q5VZL5 1548 aa21.04■□□□□ 0.96
TM9SF1-211ENST00000531406 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
TM9SF1-211ENST00000531406 MAGI2Q86UL8 1455 aa21.02■□□□□ 0.96
TM9SF1-211ENST00000531406 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
TM9SF1-211ENST00000531406 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms