RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CUL7Q14999 1698 aa27.64■■■□□ 2.02
CHMP4A-204ENST00000530996 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
CHMP4A-204ENST00000530996 IGF1RP08069 1367 aa27.6■■■□□ 2.01
CHMP4A-204ENST00000530996 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
CHMP4A-204ENST00000530996 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
CHMP4A-204ENST00000530996 ADCY10Q96PN6 1610 aa27.49■■□□□ 1.99
CHMP4A-204ENST00000530996 KIF13AQ9H1H9 1805 aa27.49■■□□□ 1.99
CHMP4A-204ENST00000530996 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
CHMP4A-204ENST00000530996 MAPKBP1O60336 1514 aa27.46■■□□□ 1.99
CHMP4A-204ENST00000530996 FAM69CQ0P6D2 419 aa27.45■■□□□ 1.98
CHMP4A-204ENST00000530996 ABCC10Q5T3U5 1492 aa27.44■■□□□ 1.98
CHMP4A-204ENST00000530996 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
CHMP4A-204ENST00000530996 DIP2BQ9P265 1576 aa27.39■■□□□ 1.98
CHMP4A-204ENST00000530996 PTPRGP23470 1445 aa27.37■■□□□ 1.97
CHMP4A-204ENST00000530996 CARMIL2Q6F5E8 1435 aa27.37■■□□□ 1.97
CHMP4A-204ENST00000530996 IQGAP2Q13576 1575 aa27.35■■□□□ 1.97
CHMP4A-204ENST00000530996 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
CHMP4A-204ENST00000530996 ABCC2Q92887 1545 aa27.24■■□□□ 1.95
CHMP4A-204ENST00000530996 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
CHMP4A-204ENST00000530996 KDM6BO15054 1643 aa27.22■■□□□ 1.95
CHMP4A-204ENST00000530996 DISP1Q96F81 1524 aa27.18■■□□□ 1.94
CHMP4A-204ENST00000530996 TSPOAP1O95153 1857 aa27.17■■□□□ 1.94
CHMP4A-204ENST00000530996 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
CHMP4A-204ENST00000530996 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
CHMP4A-204ENST00000530996 UHRF1BP1LA0JNW5 1464 aa27.13■■□□□ 1.93
CHMP4A-204ENST00000530996 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
CHMP4A-204ENST00000530996 UGGT2Q9NYU1 1516 aa27.13■■□□□ 1.93
CHMP4A-204ENST00000530996 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
CHMP4A-204ENST00000530996 GLI2P10070 1586 aa27.02■■□□□ 1.92
CHMP4A-204ENST00000530996 KDM5BQ9UGL1 1544 aa27.01■■□□□ 1.91
CHMP4A-204ENST00000530996 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.91
CHMP4A-204ENST00000530996 ZCCHC11Q5TAX3 1644 aaKnown RBP26.99■■□□□ 1.91
CHMP4A-204ENST00000530996 EPRSP07814 1512 aaKnown RBP26.97■■□□□ 1.91
CHMP4A-204ENST00000530996 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
CHMP4A-204ENST00000530996 PPRC1Q5VV67 1664 aaKnown RBP26.95■■□□□ 1.9
CHMP4A-204ENST00000530996 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
CHMP4A-204ENST00000530996 WDR7Q9Y4E6 1490 aa26.9■■□□□ 1.9
CHMP4A-204ENST00000530996 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
CHMP4A-204ENST00000530996 MAP3K4Q9Y6R4 1608 aa26.89■■□□□ 1.9
CHMP4A-204ENST00000530996 KDM4FA0A1W2PPD8 638 aa26.86■■□□□ 1.89
CHMP4A-204ENST00000530996 ABCA8O94911 1581 aa26.82■■□□□ 1.88
CHMP4A-204ENST00000530996 COL17A1Q9UMD9 1497 aaPredicted RBP26.77■■□□□ 1.88
CHMP4A-204ENST00000530996 FAM9AQ8IZU1 332 aaPredicted RBP26.76■■□□□ 1.87
CHMP4A-204ENST00000530996 ADGRL1O94910 1474 aa26.75■■□□□ 1.87
CHMP4A-204ENST00000530996 KCNH8Q96L42 1107 aa26.75■■□□□ 1.87
CHMP4A-204ENST00000530996 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
CHMP4A-204ENST00000530996 P3H3Q8IVL6 736 aa26.73■■□□□ 1.87
CHMP4A-204ENST00000530996 CD109Q6YHK3 1445 aa26.73■■□□□ 1.87
CHMP4A-204ENST00000530996 CFAP43Q8NDM7 1665 aa26.69■■□□□ 1.86
CHMP4A-204ENST00000530996 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
CHMP4A-204ENST00000530996 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
CHMP4A-204ENST00000530996 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
CHMP4A-204ENST00000530996 RANGAP1P46060 587 aaPredicted RBP26.6■■□□□ 1.85
CHMP4A-204ENST00000530996 EEA1Q15075 1411 aa26.59■■□□□ 1.85
CHMP4A-204ENST00000530996 ATP10BO94823 1461 aa26.57■■□□□ 1.84
CHMP4A-204ENST00000530996 RAPGEF6Q8TEU7 1601 aa26.56■■□□□ 1.84
CHMP4A-204ENST00000530996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
CHMP4A-204ENST00000530996 HNRNPUL2Q1KMD3 747 aaKnown RBP26.55■■□□□ 1.84
CHMP4A-204ENST00000530996 FHOD3Q2V2M9 1422 aa26.5■■□□□ 1.83
CHMP4A-204ENST00000530996 ABCA9Q8IUA7 1624 aa26.47■■□□□ 1.83
CHMP4A-204ENST00000530996 ARAP3Q8WWN8 1544 aa26.44■■□□□ 1.82
CHMP4A-204ENST00000530996 NUP153P49790 1475 aaKnown RBP26.44■■□□□ 1.82
CHMP4A-204ENST00000530996 KIF21BO75037 1637 aa26.44■■□□□ 1.82
CHMP4A-204ENST00000530996 HECW2Q9P2P5 1572 aa26.4■■□□□ 1.82
CHMP4A-204ENST00000530996 PHLDB1Q86UU1 1377 aa26.38■■□□□ 1.81
CHMP4A-204ENST00000530996 EFCAB5A4FU69 1503 aa26.38■■□□□ 1.81
CHMP4A-204ENST00000530996 NEO1Q92859 1461 aa26.36■■□□□ 1.81
CHMP4A-204ENST00000530996 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
CHMP4A-204ENST00000530996 RAPGEF3O95398 923 aa26.33■■□□□ 1.81
CHMP4A-204ENST00000530996 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
CHMP4A-204ENST00000530996 FRMPD1Q5SYB0 1578 aa26.27■■□□□ 1.8
CHMP4A-204ENST00000530996 ARID4BQ4LE39 1312 aaPredicted RBP26.24■■□□□ 1.79
CHMP4A-204ENST00000530996 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
CHMP4A-204ENST00000530996 CDK13Q14004 1512 aaKnown RBP26.24■■□□□ 1.79
CHMP4A-204ENST00000530996 CFAP74Q9C0B2 1584 aa26.22■■□□□ 1.79
CHMP4A-204ENST00000530996 FANCAO15360 1455 aa26.22■■□□□ 1.79
CHMP4A-204ENST00000530996 TTC37Q6PGP7 1564 aa26.21■■□□□ 1.79
CHMP4A-204ENST00000530996 DENND4BO75064 1496 aaPredicted RBP26.21■■□□□ 1.79
CHMP4A-204ENST00000530996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.2■■□□□ 1.79
CHMP4A-204ENST00000530996 ARHGEF40Q8TER5 1519 aa26.2■■□□□ 1.79
CHMP4A-204ENST00000530996 ATP1B4Q9UN42 357 aaPredicted RBP26.19■■□□□ 1.78
CHMP4A-204ENST00000530996 AKNAQ7Z591 1439 aa26.18■■□□□ 1.78
CHMP4A-204ENST00000530996 ILDR1Q86SU0 546 aaPredicted RBP26.17■■□□□ 1.78
CHMP4A-204ENST00000530996 PTPRMP28827 1452 aa26.16■■□□□ 1.78
CHMP4A-204ENST00000530996 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
CHMP4A-204ENST00000530996 ADAMTSL3P82987 1691 aa26.15■■□□□ 1.78
CHMP4A-204ENST00000530996 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
CHMP4A-204ENST00000530996 BCORL1Q5H9F3 1711 aa26.11■■□□□ 1.77
CHMP4A-204ENST00000530996 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
CHMP4A-204ENST00000530996 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
CHMP4A-204ENST00000530996 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
CHMP4A-204ENST00000530996 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
CHMP4A-204ENST00000530996 ZFYVE16Q7Z3T8 1539 aa26.08■■□□□ 1.77
CHMP4A-204ENST00000530996 ZMYM4Q5VZL5 1548 aa26.07■■□□□ 1.76
CHMP4A-204ENST00000530996 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
CHMP4A-204ENST00000530996 POGZQ7Z3K3 1410 aa26.03■■□□□ 1.76
CHMP4A-204ENST00000530996 YEATS2Q9ULM3 1422 aa26.03■■□□□ 1.76
CHMP4A-204ENST00000530996 PLCH2O75038 1416 aa26.02■■□□□ 1.76
CHMP4A-204ENST00000530996 SCAPERQ9BY12 1400 aa26.02■■□□□ 1.76
CHMP4A-204ENST00000530996 KIF14Q15058 1648 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms