RNA–Protein interactions for RNA: ENST00000530705.5

TPT1-212, Transcript of tumor protein, translationally-controlled 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPT1, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-212ENST00000530705 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
TPT1-212ENST00000530705 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
TPT1-212ENST00000530705 SOGA1O94964 1423 aa16.43■□□□□ 0.22
TPT1-212ENST00000530705 A0A0G2JS52 829 aa16.41■□□□□ 0.22
TPT1-212ENST00000530705 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
TPT1-212ENST00000530705 KANK1Q14678 1352 aa16.39■□□□□ 0.21
TPT1-212ENST00000530705 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
TPT1-212ENST00000530705 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
TPT1-212ENST00000530705 MLECQ14165 292 aa16.35■□□□□ 0.21
TPT1-212ENST00000530705 CCNB3Q8WWL7 1395 aa16.35■□□□□ 0.21
TPT1-212ENST00000530705 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
TPT1-212ENST00000530705 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
TPT1-212ENST00000530705 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
TPT1-212ENST00000530705 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
TPT1-212ENST00000530705 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
TPT1-212ENST00000530705 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
TPT1-212ENST00000530705 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
TPT1-212ENST00000530705 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
TPT1-212ENST00000530705 POGKQ9P215 609 aa16.26■□□□□ 0.19
TPT1-212ENST00000530705 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
TPT1-212ENST00000530705 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
TPT1-212ENST00000530705 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
TPT1-212ENST00000530705 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
TPT1-212ENST00000530705 GGT6Q6P531 493 aa16.21■□□□□ 0.18
TPT1-212ENST00000530705 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
TPT1-212ENST00000530705 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
TPT1-212ENST00000530705 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
TPT1-212ENST00000530705 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
TPT1-212ENST00000530705 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
TPT1-212ENST00000530705 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
TPT1-212ENST00000530705 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
TPT1-212ENST00000530705 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
TPT1-212ENST00000530705 WDR43Q15061 677 aaKnown RBP eCLIP16.17■□□□□ 0.18
TPT1-212ENST00000530705 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
TPT1-212ENST00000530705 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
TPT1-212ENST00000530705 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
TPT1-212ENST00000530705 FMN1Q68DA7 1419 aa16.14■□□□□ 0.17
TPT1-212ENST00000530705 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
TPT1-212ENST00000530705 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
TPT1-212ENST00000530705 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
TPT1-212ENST00000530705 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPT1-212ENST00000530705 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
TPT1-212ENST00000530705 PTPRGP23470 1445 aa16.09■□□□□ 0.17
TPT1-212ENST00000530705 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
TPT1-212ENST00000530705 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
TPT1-212ENST00000530705 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
TPT1-212ENST00000530705 NPHP1O15259 732 aa16.03■□□□□ 0.16
TPT1-212ENST00000530705 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
TPT1-212ENST00000530705 KNSTRNQ9Y448 316 aa16.02■□□□□ 0.15
TPT1-212ENST00000530705 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
TPT1-212ENST00000530705 KIF3BO15066 747 aa16■□□□□ 0.15
TPT1-212ENST00000530705 ARXQ96QS3 562 aa15.99■□□□□ 0.15
TPT1-212ENST00000530705 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
TPT1-212ENST00000530705 WASHC2CQ9Y4E1 1318 aa15.99■□□□□ 0.15
TPT1-212ENST00000530705 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
TPT1-212ENST00000530705 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
TPT1-212ENST00000530705 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
TPT1-212ENST00000530705 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
TPT1-212ENST00000530705 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
TPT1-212ENST00000530705 PNNQ9H307 717 aaKnown RBP15.95■□□□□ 0.14
TPT1-212ENST00000530705 MYH16Q9H6N6 1097 aa15.95■□□□□ 0.14
TPT1-212ENST00000530705 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
TPT1-212ENST00000530705 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
TPT1-212ENST00000530705 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
TPT1-212ENST00000530705 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
TPT1-212ENST00000530705 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
TPT1-212ENST00000530705 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.13
TPT1-212ENST00000530705 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
TPT1-212ENST00000530705 TMF1P82094 1093 aa15.87■□□□□ 0.13
TPT1-212ENST00000530705 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
TPT1-212ENST00000530705 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
TPT1-212ENST00000530705 FAM9BQ8IZU0 186 aa15.86■□□□□ 0.13
TPT1-212ENST00000530705 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
TPT1-212ENST00000530705 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
TPT1-212ENST00000530705 UPF2Q9HAU5 1272 aaKnown RBP15.84■□□□□ 0.13
TPT1-212ENST00000530705 MRC2Q9UBG0 1479 aa15.83■□□□□ 0.13
TPT1-212ENST00000530705 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
TPT1-212ENST00000530705 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
TPT1-212ENST00000530705 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
TPT1-212ENST00000530705 NUP155O75694 1391 aa15.82■□□□□ 0.12
TPT1-212ENST00000530705 STK26Q9P289 416 aa15.82■□□□□ 0.12
TPT1-212ENST00000530705 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■■■□ 24.1
TPT1-212ENST00000530705 PKD2Q13563 968 aa15.81■□□□□ 0.12
TPT1-212ENST00000530705 WIZO95785 1651 aa15.81■□□□□ 0.12
TPT1-212ENST00000530705 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
TPT1-212ENST00000530705 HNRNPUQ00839 825 aaKnown RBP eCLIP15.8■□□□□ 0.12
TPT1-212ENST00000530705 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
TPT1-212ENST00000530705 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
TPT1-212ENST00000530705 TMX4Q9H1E5 349 aaPredicted RBP15.79■□□□□ 0.12
TPT1-212ENST00000530705 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
TPT1-212ENST00000530705 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
TPT1-212ENST00000530705 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.11
TPT1-212ENST00000530705 CHMP4BQ9H444 224 aaKnown RBP15.76■□□□□ 0.11
TPT1-212ENST00000530705 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
TPT1-212ENST00000530705 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPT1-212ENST00000530705 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
TPT1-212ENST00000530705 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
TPT1-212ENST00000530705 HSP90AA1P07900 732 aaKnown RBP15.74■□□□□ 0.11
TPT1-212ENST00000530705 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
TPT1-212ENST00000530705 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms