RNA–Protein interactions for RNA: ENST00000530669.1

PUM1-221, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-221ENST00000530669 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
PUM1-221ENST00000530669 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
PUM1-221ENST00000530669 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
PUM1-221ENST00000530669 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
PUM1-221ENST00000530669 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
PUM1-221ENST00000530669 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
PUM1-221ENST00000530669 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
PUM1-221ENST00000530669 APLP2Q06481 763 aa16.38■□□□□ 0.21
PUM1-221ENST00000530669 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
PUM1-221ENST00000530669 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
PUM1-221ENST00000530669 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
PUM1-221ENST00000530669 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
PUM1-221ENST00000530669 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
PUM1-221ENST00000530669 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
PUM1-221ENST00000530669 MAP3K1Q13233 1512 aa16.3■□□□□ 0.2
PUM1-221ENST00000530669 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
PUM1-221ENST00000530669 IQGAP2Q13576 1575 aa16.3■□□□□ 0.2
PUM1-221ENST00000530669 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
PUM1-221ENST00000530669 UGGT2Q9NYU1 1516 aa16.26■□□□□ 0.19
PUM1-221ENST00000530669 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
PUM1-221ENST00000530669 FHOD3Q2V2M9 1422 aa16.25■□□□□ 0.19
PUM1-221ENST00000530669 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
PUM1-221ENST00000530669 NUP160Q12769 1436 aa16.23■□□□□ 0.19
PUM1-221ENST00000530669 FYCO1Q9BQS8 1478 aa16.21■□□□□ 0.19
PUM1-221ENST00000530669 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
PUM1-221ENST00000530669 FBLN2P98095 1184 aa16.19■□□□□ 0.18
PUM1-221ENST00000530669 TIAM1Q13009 1591 aa16.18■□□□□ 0.18
PUM1-221ENST00000530669 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
PUM1-221ENST00000530669 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
PUM1-221ENST00000530669 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
PUM1-221ENST00000530669 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
PUM1-221ENST00000530669 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
PUM1-221ENST00000530669 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
PUM1-221ENST00000530669 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
PUM1-221ENST00000530669 CHD1O14646 1710 aa16.11■□□□□ 0.17
PUM1-221ENST00000530669 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
PUM1-221ENST00000530669 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
PUM1-221ENST00000530669 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
PUM1-221ENST00000530669 HRCP23327 699 aa16.07■□□□□ 0.16
PUM1-221ENST00000530669 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
PUM1-221ENST00000530669 RRBP1Q9P2E9 1410 aaKnown RBP16.05■□□□□ 0.16
PUM1-221ENST00000530669 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
PUM1-221ENST00000530669 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
PUM1-221ENST00000530669 SHROOM2Q13796 1616 aa16■□□□□ 0.15
PUM1-221ENST00000530669 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
PUM1-221ENST00000530669 RAPGEF6Q8TEU7 1601 aa15.99■□□□□ 0.15
PUM1-221ENST00000530669 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
PUM1-221ENST00000530669 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
PUM1-221ENST00000530669 PRG4Q92954 1404 aaPredicted RBP15.97■□□□□ 0.15
PUM1-221ENST00000530669 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
PUM1-221ENST00000530669 FOXD1Q16676 465 aa15.96■□□□□ 0.15
PUM1-221ENST00000530669 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
PUM1-221ENST00000530669 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PUM1-221ENST00000530669 PHLDB1Q86UU1 1377 aa15.94■□□□□ 0.14
PUM1-221ENST00000530669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.14
PUM1-221ENST00000530669 NUP153P49790 1475 aaKnown RBP15.94■□□□□ 0.14
PUM1-221ENST00000530669 SUPT6HQ7KZ85 1726 aaKnown RBP15.94■□□□□ 0.14
PUM1-221ENST00000530669 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
PUM1-221ENST00000530669 ABCA8O94911 1581 aa15.92■□□□□ 0.14
PUM1-221ENST00000530669 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
PUM1-221ENST00000530669 PTPRGP23470 1445 aa15.92■□□□□ 0.14
PUM1-221ENST00000530669 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
PUM1-221ENST00000530669 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
PUM1-221ENST00000530669 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
PUM1-221ENST00000530669 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
PUM1-221ENST00000530669 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
PUM1-221ENST00000530669 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
PUM1-221ENST00000530669 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
PUM1-221ENST00000530669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
PUM1-221ENST00000530669 TROQ12816 1431 aaPredicted RBP15.83■□□□□ 0.12
PUM1-221ENST00000530669 UACAQ9BZF9 1416 aa15.83■□□□□ 0.12
PUM1-221ENST00000530669 ATP10BO94823 1461 aa15.83■□□□□ 0.12
PUM1-221ENST00000530669 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
PUM1-221ENST00000530669 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
PUM1-221ENST00000530669 MIA2Q96PC5 1412 aa15.82■□□□□ 0.12
PUM1-221ENST00000530669 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
PUM1-221ENST00000530669 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
PUM1-221ENST00000530669 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
PUM1-221ENST00000530669 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
PUM1-221ENST00000530669 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
PUM1-221ENST00000530669 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
PUM1-221ENST00000530669 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
PUM1-221ENST00000530669 ADRA2BP18089 450 aa15.77■□□□□ 0.12
PUM1-221ENST00000530669 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
PUM1-221ENST00000530669 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.11
PUM1-221ENST00000530669 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
PUM1-221ENST00000530669 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
PUM1-221ENST00000530669 ITGAEP38570 1179 aa15.73■□□□□ 0.11
PUM1-221ENST00000530669 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
PUM1-221ENST00000530669 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
PUM1-221ENST00000530669 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
PUM1-221ENST00000530669 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
PUM1-221ENST00000530669 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
PUM1-221ENST00000530669 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
PUM1-221ENST00000530669 KIF14Q15058 1648 aa15.68■□□□□ 0.1
PUM1-221ENST00000530669 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
PUM1-221ENST00000530669 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
PUM1-221ENST00000530669 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
PUM1-221ENST00000530669 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
PUM1-221ENST00000530669 CDC42BPAQ5VT25 1732 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms