RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
USP35-205ENST00000530521 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP35-205ENST00000530521 TSPOAP1O95153 1857 aa15.44■□□□□ 0.06
USP35-205ENST00000530521 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
USP35-205ENST00000530521 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
USP35-205ENST00000530521 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
USP35-205ENST00000530521 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
USP35-205ENST00000530521 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
USP35-205ENST00000530521 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
USP35-205ENST00000530521 MAPKBP1O60336 1514 aa15.33■□□□□ 0.05
USP35-205ENST00000530521 IGF1RP08069 1367 aa15.33■□□□□ 0.04
USP35-205ENST00000530521 KDM6BO15054 1643 aa15.32■□□□□ 0.04
USP35-205ENST00000530521 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
USP35-205ENST00000530521 PTPRGP23470 1445 aa15.26■□□□□ 0.03
USP35-205ENST00000530521 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
USP35-205ENST00000530521 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
USP35-205ENST00000530521 CUL7Q14999 1698 aa15.21■□□□□ 0.03
USP35-205ENST00000530521 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.02
USP35-205ENST00000530521 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
USP35-205ENST00000530521 ASXL2Q76L83 1435 aa15.18■□□□□ 0.02
USP35-205ENST00000530521 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
USP35-205ENST00000530521 ABCC2Q92887 1545 aa15.16■□□□□ 0.02
USP35-205ENST00000530521 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
USP35-205ENST00000530521 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
USP35-205ENST00000530521 ADGRL1O94910 1474 aa15.12■□□□□ 0.01
USP35-205ENST00000530521 PLB1Q6P1J6 1458 aa15.12■□□□□ 0.01
USP35-205ENST00000530521 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
USP35-205ENST00000530521 GLI2P10070 1586 aa15.11■□□□□ 0.01
USP35-205ENST00000530521 UACAQ9BZF9 1416 aa15.1■□□□□ 0.01
USP35-205ENST00000530521 DISP1Q96F81 1524 aa15.1■□□□□ 0.01
USP35-205ENST00000530521 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0
USP35-205ENST00000530521 EPRSP07814 1512 aaKnown RBP15.07■□□□□ 0
USP35-205ENST00000530521 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
USP35-205ENST00000530521 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
USP35-205ENST00000530521 KCNH8Q96L42 1107 aa15.04■□□□□ -0
USP35-205ENST00000530521 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
USP35-205ENST00000530521 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
USP35-205ENST00000530521 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
USP35-205ENST00000530521 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
USP35-205ENST00000530521 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
USP35-205ENST00000530521 TEX14Q8IWB6 1497 aa14.97□□□□□ -0.01
USP35-205ENST00000530521 ARID3CA6NKF2 412 aa14.96□□□□□ -0.01
USP35-205ENST00000530521 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
USP35-205ENST00000530521 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
USP35-205ENST00000530521 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
USP35-205ENST00000530521 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
USP35-205ENST00000530521 KIF21BO75037 1637 aa14.89□□□□□ -0.03
USP35-205ENST00000530521 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
USP35-205ENST00000530521 MAGI3Q5TCQ9 1506 aa14.87□□□□□ -0.03
USP35-205ENST00000530521 ABCA8O94911 1581 aa14.86□□□□□ -0.03
USP35-205ENST00000530521 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
USP35-205ENST00000530521 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
USP35-205ENST00000530521 RAPGEF3O95398 923 aa14.82□□□□□ -0.04
USP35-205ENST00000530521 ATP10BO94823 1461 aa14.8□□□□□ -0.04
USP35-205ENST00000530521 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
USP35-205ENST00000530521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
USP35-205ENST00000530521 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
USP35-205ENST00000530521 ARAP3Q8WWN8 1544 aa14.77□□□□□ -0.04
USP35-205ENST00000530521 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
USP35-205ENST00000530521 PRXQ9BXM0 1461 aa14.76□□□□□ -0.05
USP35-205ENST00000530521 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
USP35-205ENST00000530521 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
USP35-205ENST00000530521 ADAMTSL3P82987 1691 aa14.74□□□□□ -0.05
USP35-205ENST00000530521 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
USP35-205ENST00000530521 PTPRMP28827 1452 aa14.74□□□□□ -0.05
USP35-205ENST00000530521 ABCA9Q8IUA7 1624 aa14.72□□□□□ -0.05
USP35-205ENST00000530521 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
USP35-205ENST00000530521 MADDQ8WXG6 1647 aa14.68□□□□□ -0.06
USP35-205ENST00000530521 RAPGEF6Q8TEU7 1601 aa14.67□□□□□ -0.06
USP35-205ENST00000530521 HSPA2P54652 639 aa14.67□□□□□ -0.06
USP35-205ENST00000530521 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
USP35-205ENST00000530521 FRMPD1Q5SYB0 1578 aa14.66□□□□□ -0.06
USP35-205ENST00000530521 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
USP35-205ENST00000530521 RIMS1Q86UR5 1692 aaKnown RBP14.65□□□□□ -0.06
USP35-205ENST00000530521 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
USP35-205ENST00000530521 NEO1Q92859 1461 aa14.63□□□□□ -0.07
USP35-205ENST00000530521 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
USP35-205ENST00000530521 MLECQ14165 292 aa14.62□□□□□ -0.07
USP35-205ENST00000530521 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
USP35-205ENST00000530521 LMTK3Q96Q04 1460 aa14.62□□□□□ -0.07
USP35-205ENST00000530521 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
USP35-205ENST00000530521 RICTORQ6R327 1708 aa14.61□□□□□ -0.07
USP35-205ENST00000530521 SIGLEC1Q9BZZ2 1709 aa14.61□□□□□ -0.07
USP35-205ENST00000530521 FHOD3Q2V2M9 1422 aa14.6□□□□□ -0.07
USP35-205ENST00000530521 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
USP35-205ENST00000530521 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
USP35-205ENST00000530521 DENND4BO75064 1496 aaPredicted RBP14.58□□□□□ -0.08
USP35-205ENST00000530521 YEATS2Q9ULM3 1422 aa14.56□□□□□ -0.08
USP35-205ENST00000530521 FANCAO15360 1455 aa14.56□□□□□ -0.08
USP35-205ENST00000530521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP35-205ENST00000530521 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
USP35-205ENST00000530521 TTC37Q6PGP7 1564 aa14.53□□□□□ -0.08
USP35-205ENST00000530521 ARHGEF40Q8TER5 1519 aa14.53□□□□□ -0.08
USP35-205ENST00000530521 CEBPAP49715 358 aaPredicted RBP14.53□□□□□ -0.08
USP35-205ENST00000530521 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
USP35-205ENST00000530521 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
USP35-205ENST00000530521 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
USP35-205ENST00000530521 ZFYVE16Q7Z3T8 1539 aa14.5□□□□□ -0.09
USP35-205ENST00000530521 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
USP35-205ENST00000530521 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms