RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 CUL7Q14999 1698 aa13.37□□□□□ -0.27
NUP98-217ENST00000530345 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
NUP98-217ENST00000530345 DIP2BQ9P265 1576 aa13.33□□□□□ -0.28
NUP98-217ENST00000530345 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
NUP98-217ENST00000530345 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
NUP98-217ENST00000530345 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
NUP98-217ENST00000530345 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
NUP98-217ENST00000530345 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
NUP98-217ENST00000530345 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
NUP98-217ENST00000530345 KDM6BO15054 1643 aa13.27□□□□□ -0.29
NUP98-217ENST00000530345 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
NUP98-217ENST00000530345 KIF27Q86VH2 1401 aa13.24□□□□□ -0.29
NUP98-217ENST00000530345 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
NUP98-217ENST00000530345 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
NUP98-217ENST00000530345 GLI2P10070 1586 aa13.18□□□□□ -0.3
NUP98-217ENST00000530345 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
NUP98-217ENST00000530345 IGF1RP08069 1367 aa13.18□□□□□ -0.3
NUP98-217ENST00000530345 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
NUP98-217ENST00000530345 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
NUP98-217ENST00000530345 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.31
NUP98-217ENST00000530345 PTPRGP23470 1445 aa13.14□□□□□ -0.31
NUP98-217ENST00000530345 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
NUP98-217ENST00000530345 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
NUP98-217ENST00000530345 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
NUP98-217ENST00000530345 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
NUP98-217ENST00000530345 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
NUP98-217ENST00000530345 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
NUP98-217ENST00000530345 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
NUP98-217ENST00000530345 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.32
NUP98-217ENST00000530345 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
NUP98-217ENST00000530345 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
NUP98-217ENST00000530345 UACAQ9BZF9 1416 aa13.06□□□□□ -0.32
NUP98-217ENST00000530345 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
NUP98-217ENST00000530345 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
NUP98-217ENST00000530345 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
NUP98-217ENST00000530345 RAPGEF2Q9Y4G8 1499 aa13.03□□□□□ -0.32
NUP98-217ENST00000530345 EPRSP07814 1512 aaKnown RBP13.03□□□□□ -0.32
NUP98-217ENST00000530345 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
NUP98-217ENST00000530345 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
NUP98-217ENST00000530345 GOLGA3Q08378 1498 aa12.98□□□□□ -0.33
NUP98-217ENST00000530345 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
NUP98-217ENST00000530345 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
NUP98-217ENST00000530345 ABCA8O94911 1581 aa12.93□□□□□ -0.34
NUP98-217ENST00000530345 TTBK1Q5TCY1 1321 aaPredicted RBP12.91□□□□□ -0.34
NUP98-217ENST00000530345 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
NUP98-217ENST00000530345 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
NUP98-217ENST00000530345 CD109Q6YHK3 1445 aa12.87□□□□□ -0.35
NUP98-217ENST00000530345 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
NUP98-217ENST00000530345 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
NUP98-217ENST00000530345 KIF21BO75037 1637 aa12.84□□□□□ -0.35
NUP98-217ENST00000530345 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
NUP98-217ENST00000530345 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
NUP98-217ENST00000530345 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
NUP98-217ENST00000530345 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
NUP98-217ENST00000530345 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
NUP98-217ENST00000530345 RAPGEF6Q8TEU7 1601 aa12.79□□□□□ -0.36
NUP98-217ENST00000530345 ADAMTSL3P82987 1691 aa12.78□□□□□ -0.36
NUP98-217ENST00000530345 NEO1Q92859 1461 aa12.78□□□□□ -0.36
NUP98-217ENST00000530345 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.37
NUP98-217ENST00000530345 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
NUP98-217ENST00000530345 ATP10BO94823 1461 aa12.74□□□□□ -0.37
NUP98-217ENST00000530345 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
NUP98-217ENST00000530345 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
NUP98-217ENST00000530345 FRMPD1Q5SYB0 1578 aa12.71□□□□□ -0.37
NUP98-217ENST00000530345 ARHGEF40Q8TER5 1519 aa12.71□□□□□ -0.38
NUP98-217ENST00000530345 EEA1Q15075 1411 aa12.7□□□□□ -0.38
NUP98-217ENST00000530345 PTPRMP28827 1452 aa12.69□□□□□ -0.38
NUP98-217ENST00000530345 MADDQ8WXG6 1647 aa12.68□□□□□ -0.38
NUP98-217ENST00000530345 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
NUP98-217ENST00000530345 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
NUP98-217ENST00000530345 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
NUP98-217ENST00000530345 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
NUP98-217ENST00000530345 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
NUP98-217ENST00000530345 FANCAO15360 1455 aa12.63□□□□□ -0.39
NUP98-217ENST00000530345 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
NUP98-217ENST00000530345 FER1L4A9Z1Z3 1794 aa12.63□□□□□ -0.39
NUP98-217ENST00000530345 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
NUP98-217ENST00000530345 MAGI2Q86UL8 1455 aa12.62□□□□□ -0.39
NUP98-217ENST00000530345 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
NUP98-217ENST00000530345 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
NUP98-217ENST00000530345 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
NUP98-217ENST00000530345 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
NUP98-217ENST00000530345 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
NUP98-217ENST00000530345 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
NUP98-217ENST00000530345 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
NUP98-217ENST00000530345 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
NUP98-217ENST00000530345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUP98-217ENST00000530345 AKNAQ7Z591 1439 aa12.59□□□□□ -0.39
NUP98-217ENST00000530345 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
NUP98-217ENST00000530345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
NUP98-217ENST00000530345 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
NUP98-217ENST00000530345 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
NUP98-217ENST00000530345 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
NUP98-217ENST00000530345 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
NUP98-217ENST00000530345 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
NUP98-217ENST00000530345 PREX1Q8TCU6 1659 aa12.56□□□□□ -0.4
NUP98-217ENST00000530345 ARID4BQ4LE39 1312 aaPredicted RBP12.56□□□□□ -0.4
NUP98-217ENST00000530345 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
NUP98-217ENST00000530345 KIF14Q15058 1648 aa12.51□□□□□ -0.41
NUP98-217ENST00000530345 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms