RNA–Protein interactions for RNA: ENST00000529878.1

SCN4B-204, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4 BASIC

Gene SCN4B, Length 566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-204ENST00000529878 IGF1RP08069 1367 aa26.97■■□□□ 1.91
SCN4B-204ENST00000529878 NPM1P06748 294 aaKnown RBP eCLIP26.94■■□□□ 1.9
SCN4B-204ENST00000529878 CUL7Q14999 1698 aa26.92■■□□□ 1.9
SCN4B-204ENST00000529878 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.89
SCN4B-204ENST00000529878 FAM69CQ0P6D2 419 aa26.86■■□□□ 1.89
SCN4B-204ENST00000529878 KIF13AQ9H1H9 1805 aa26.82■■□□□ 1.88
SCN4B-204ENST00000529878 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
SCN4B-204ENST00000529878 ABCC10Q5T3U5 1492 aa26.78■■□□□ 1.88
SCN4B-204ENST00000529878 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
SCN4B-204ENST00000529878 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
SCN4B-204ENST00000529878 RAPGEF2Q9Y4G8 1499 aa26.62■■□□□ 1.85
SCN4B-204ENST00000529878 ADCY10Q96PN6 1610 aa26.62■■□□□ 1.85
SCN4B-204ENST00000529878 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
SCN4B-204ENST00000529878 PTPRGP23470 1445 aa26.58■■□□□ 1.85
SCN4B-204ENST00000529878 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
SCN4B-204ENST00000529878 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
SCN4B-204ENST00000529878 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
SCN4B-204ENST00000529878 EEA1Q15075 1411 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 KDM4FA0A1W2PPD8 638 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 KDM6BO15054 1643 aa26.48■■□□□ 1.83
SCN4B-204ENST00000529878 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
SCN4B-204ENST00000529878 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
SCN4B-204ENST00000529878 CTTNBP2Q8WZ74 1663 aa26.44■■□□□ 1.82
SCN4B-204ENST00000529878 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
SCN4B-204ENST00000529878 DISP1Q96F81 1524 aa26.42■■□□□ 1.82
SCN4B-204ENST00000529878 ABCC2Q92887 1545 aa26.41■■□□□ 1.82
SCN4B-204ENST00000529878 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.82
SCN4B-204ENST00000529878 PLB1Q6P1J6 1458 aa26.39■■□□□ 1.82
SCN4B-204ENST00000529878 ASXL2Q76L83 1435 aa26.37■■□□□ 1.81
SCN4B-204ENST00000529878 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SCN4B-204ENST00000529878 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 UHRF1BP1LA0JNW5 1464 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 UACAQ9BZF9 1416 aa26.33■■□□□ 1.81
SCN4B-204ENST00000529878 GLI2P10070 1586 aa26.32■■□□□ 1.8
SCN4B-204ENST00000529878 KIF21BO75037 1637 aa26.25■■□□□ 1.79
SCN4B-204ENST00000529878 KDM5BQ9UGL1 1544 aa26.22■■□□□ 1.79
SCN4B-204ENST00000529878 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
SCN4B-204ENST00000529878 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
SCN4B-204ENST00000529878 PPRC1Q5VV67 1664 aaKnown RBP26.18■■□□□ 1.78
SCN4B-204ENST00000529878 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
SCN4B-204ENST00000529878 COL17A1Q9UMD9 1497 aaPredicted RBP26.14■■□□□ 1.78
SCN4B-204ENST00000529878 P3H3Q8IVL6 736 aa26.12■■□□□ 1.77
SCN4B-204ENST00000529878 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
SCN4B-204ENST00000529878 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
SCN4B-204ENST00000529878 ADGRL1O94910 1474 aa26.1■■□□□ 1.77
SCN4B-204ENST00000529878 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
SCN4B-204ENST00000529878 MAP3K4Q9Y6R4 1608 aa26.1■■□□□ 1.77
SCN4B-204ENST00000529878 SAMD9Q5K651 1589 aa26.06■■□□□ 1.76
SCN4B-204ENST00000529878 ABCA8O94911 1581 aa26.05■■□□□ 1.76
SCN4B-204ENST00000529878 WDR7Q9Y4E6 1490 aa26.04■■□□□ 1.76
SCN4B-204ENST00000529878 ILDR1Q86SU0 546 aaPredicted RBP26.03■■□□□ 1.76
SCN4B-204ENST00000529878 KCNH8Q96L42 1107 aa26.02■■□□□ 1.76
SCN4B-204ENST00000529878 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
SCN4B-204ENST00000529878 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
SCN4B-204ENST00000529878 FHOD3Q2V2M9 1422 aa25.95■■□□□ 1.74
SCN4B-204ENST00000529878 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
SCN4B-204ENST00000529878 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
SCN4B-204ENST00000529878 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
SCN4B-204ENST00000529878 RAPGEF6Q8TEU7 1601 aa25.88■■□□□ 1.73
SCN4B-204ENST00000529878 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
SCN4B-204ENST00000529878 ATP10BO94823 1461 aa25.83■■□□□ 1.73
SCN4B-204ENST00000529878 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
SCN4B-204ENST00000529878 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
SCN4B-204ENST00000529878 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
SCN4B-204ENST00000529878 ARAP3Q8WWN8 1544 aa25.76■■□□□ 1.71
SCN4B-204ENST00000529878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
SCN4B-204ENST00000529878 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
SCN4B-204ENST00000529878 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
SCN4B-204ENST00000529878 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
SCN4B-204ENST00000529878 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
SCN4B-204ENST00000529878 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
SCN4B-204ENST00000529878 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
SCN4B-204ENST00000529878 ABCA9Q8IUA7 1624 aa25.61■■□□□ 1.69
SCN4B-204ENST00000529878 NEO1Q92859 1461 aa25.59■■□□□ 1.69
SCN4B-204ENST00000529878 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
SCN4B-204ENST00000529878 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
SCN4B-204ENST00000529878 ARID4BQ4LE39 1312 aaPredicted RBP25.54■■□□□ 1.68
SCN4B-204ENST00000529878 PTPRMP28827 1452 aa25.53■■□□□ 1.68
SCN4B-204ENST00000529878 CLIP1P30622 1438 aa25.52■■□□□ 1.68
SCN4B-204ENST00000529878 FBXO41Q8TF61 875 aa25.51■■□□□ 1.67
SCN4B-204ENST00000529878 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
SCN4B-204ENST00000529878 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
SCN4B-204ENST00000529878 LRRIQ1Q96JM4 1722 aa25.48■■□□□ 1.67
SCN4B-204ENST00000529878 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
SCN4B-204ENST00000529878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
SCN4B-204ENST00000529878 DENND4BO75064 1496 aaPredicted RBP25.41■■□□□ 1.66
SCN4B-204ENST00000529878 CASKIN1Q8WXD9 1431 aa25.41■■□□□ 1.66
SCN4B-204ENST00000529878 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 FYCO1Q9BQS8 1478 aa25.38■■□□□ 1.65
SCN4B-204ENST00000529878 KIF14Q15058 1648 aa25.37■■□□□ 1.65
SCN4B-204ENST00000529878 FRMPD1Q5SYB0 1578 aa25.37■■□□□ 1.65
SCN4B-204ENST00000529878 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
SCN4B-204ENST00000529878 FANCAO15360 1455 aa25.34■■□□□ 1.65
SCN4B-204ENST00000529878 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
SCN4B-204ENST00000529878 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
SCN4B-204ENST00000529878 POGZQ7Z3K3 1410 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms