RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
TRIM3-209ENST00000529529 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
TRIM3-209ENST00000529529 KIAA0586Q9BVV6 1533 aa27.87■■■□□ 2.05
TRIM3-209ENST00000529529 CUL7Q14999 1698 aa27.87■■■□□ 2.05
TRIM3-209ENST00000529529 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
TRIM3-209ENST00000529529 TTBK1Q5TCY1 1321 aaPredicted RBP27.68■■■□□ 2.02
TRIM3-209ENST00000529529 PTPRGP23470 1445 aa27.65■■■□□ 2.02
TRIM3-209ENST00000529529 FAM69CQ0P6D2 419 aa27.63■■■□□ 2.01
TRIM3-209ENST00000529529 CARMIL2Q6F5E8 1435 aa27.62■■■□□ 2.01
TRIM3-209ENST00000529529 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
TRIM3-209ENST00000529529 ADCY10Q96PN6 1610 aa27.59■■■□□ 2.01
TRIM3-209ENST00000529529 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
TRIM3-209ENST00000529529 IQGAP2Q13576 1575 aa27.57■■■□□ 2
TRIM3-209ENST00000529529 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
TRIM3-209ENST00000529529 KIF13AQ9H1H9 1805 aa27.53■■■□□ 2
TRIM3-209ENST00000529529 MAPKBP1O60336 1514 aa27.53■■■□□ 2
TRIM3-209ENST00000529529 DISP1Q96F81 1524 aa27.46■■□□□ 1.99
TRIM3-209ENST00000529529 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
TRIM3-209ENST00000529529 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
TRIM3-209ENST00000529529 DIP2BQ9P265 1576 aa27.41■■□□□ 1.98
TRIM3-209ENST00000529529 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
TRIM3-209ENST00000529529 UACAQ9BZF9 1416 aa27.4■■□□□ 1.98
TRIM3-209ENST00000529529 UHRF1BP1LA0JNW5 1464 aa27.37■■□□□ 1.97
TRIM3-209ENST00000529529 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
TRIM3-209ENST00000529529 ASXL2Q76L83 1435 aa27.32■■□□□ 1.96
TRIM3-209ENST00000529529 KIAA0556O60303 1618 aa27.3■■□□□ 1.96
TRIM3-209ENST00000529529 PLB1Q6P1J6 1458 aa27.3■■□□□ 1.96
TRIM3-209ENST00000529529 CSRNP3Q8WYN3 585 aa27.29■■□□□ 1.96
TRIM3-209ENST00000529529 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
TRIM3-209ENST00000529529 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
TRIM3-209ENST00000529529 KDM5BQ9UGL1 1544 aa27.24■■□□□ 1.95
TRIM3-209ENST00000529529 TSPOAP1O95153 1857 aa27.22■■□□□ 1.95
TRIM3-209ENST00000529529 KDM6BO15054 1643 aa27.17■■□□□ 1.94
TRIM3-209ENST00000529529 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
TRIM3-209ENST00000529529 GLI2P10070 1586 aa27.17■■□□□ 1.94
TRIM3-209ENST00000529529 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
TRIM3-209ENST00000529529 ZCCHC11Q5TAX3 1644 aaKnown RBP27.14■■□□□ 1.94
TRIM3-209ENST00000529529 EPRSP07814 1512 aaKnown RBP27.14■■□□□ 1.94
TRIM3-209ENST00000529529 EEA1Q15075 1411 aa27.08■■□□□ 1.93
TRIM3-209ENST00000529529 ABCA8O94911 1581 aa27.07■■□□□ 1.92
TRIM3-209ENST00000529529 KCNH8Q96L42 1107 aa27.07■■□□□ 1.92
TRIM3-209ENST00000529529 WDR7Q9Y4E6 1490 aa27.05■■□□□ 1.92
TRIM3-209ENST00000529529 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
TRIM3-209ENST00000529529 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
TRIM3-209ENST00000529529 PPRC1Q5VV67 1664 aaKnown RBP27.03■■□□□ 1.92
TRIM3-209ENST00000529529 MAP3K4Q9Y6R4 1608 aa26.99■■□□□ 1.91
TRIM3-209ENST00000529529 TEX14Q8IWB6 1497 aa26.97■■□□□ 1.91
TRIM3-209ENST00000529529 COL17A1Q9UMD9 1497 aaPredicted RBP26.95■■□□□ 1.91
TRIM3-209ENST00000529529 KDM4FA0A1W2PPD8 638 aa26.95■■□□□ 1.9
TRIM3-209ENST00000529529 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
TRIM3-209ENST00000529529 ATP10BO94823 1461 aa26.93■■□□□ 1.9
TRIM3-209ENST00000529529 CD109Q6YHK3 1445 aa26.92■■□□□ 1.9
TRIM3-209ENST00000529529 SAMD9Q5K651 1589 aa26.92■■□□□ 1.9
TRIM3-209ENST00000529529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.89■■□□□ 1.9
TRIM3-209ENST00000529529 HNRNPUL2Q1KMD3 747 aaKnown RBP26.89■■□□□ 1.9
TRIM3-209ENST00000529529 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
TRIM3-209ENST00000529529 MAGI3Q5TCQ9 1506 aa26.85■■□□□ 1.89
TRIM3-209ENST00000529529 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
TRIM3-209ENST00000529529 CFAP43Q8NDM7 1665 aa26.82■■□□□ 1.88
TRIM3-209ENST00000529529 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
TRIM3-209ENST00000529529 KIF21BO75037 1637 aa26.8■■□□□ 1.88
TRIM3-209ENST00000529529 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
TRIM3-209ENST00000529529 NUP153P49790 1475 aaKnown RBP26.74■■□□□ 1.87
TRIM3-209ENST00000529529 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
TRIM3-209ENST00000529529 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
TRIM3-209ENST00000529529 ADGRL1O94910 1474 aa26.68■■□□□ 1.86
TRIM3-209ENST00000529529 ABCA9Q8IUA7 1624 aa26.66■■□□□ 1.86
TRIM3-209ENST00000529529 ARAP3Q8WWN8 1544 aa26.64■■□□□ 1.85
TRIM3-209ENST00000529529 PHLDB1Q86UU1 1377 aa26.63■■□□□ 1.85
TRIM3-209ENST00000529529 ATP1B4Q9UN42 357 aaPredicted RBP26.62■■□□□ 1.85
TRIM3-209ENST00000529529 RAPGEF3O95398 923 aa26.59■■□□□ 1.85
TRIM3-209ENST00000529529 NEO1Q92859 1461 aa26.55■■□□□ 1.84
TRIM3-209ENST00000529529 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
TRIM3-209ENST00000529529 FMN1Q68DA7 1419 aa26.52■■□□□ 1.84
TRIM3-209ENST00000529529 CDK13Q14004 1512 aaKnown RBP26.49■■□□□ 1.83
TRIM3-209ENST00000529529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.46■■□□□ 1.83
TRIM3-209ENST00000529529 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
TRIM3-209ENST00000529529 AKNAQ7Z591 1439 aa26.44■■□□□ 1.82
TRIM3-209ENST00000529529 FANCAO15360 1455 aa26.42■■□□□ 1.82
TRIM3-209ENST00000529529 DENND4BO75064 1496 aaPredicted RBP26.4■■□□□ 1.82
TRIM3-209ENST00000529529 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
TRIM3-209ENST00000529529 TTC37Q6PGP7 1564 aa26.38■■□□□ 1.81
TRIM3-209ENST00000529529 ARID4BQ4LE39 1312 aaPredicted RBP26.38■■□□□ 1.81
TRIM3-209ENST00000529529 PLCH2O75038 1416 aa26.36■■□□□ 1.81
TRIM3-209ENST00000529529 FRMPD1Q5SYB0 1578 aa26.36■■□□□ 1.81
TRIM3-209ENST00000529529 EFCAB2Q5VUJ9 269 aa26.32■■□□□ 1.8
TRIM3-209ENST00000529529 CFAP74Q9C0B2 1584 aa26.32■■□□□ 1.8
TRIM3-209ENST00000529529 SCAPERQ9BY12 1400 aa26.29■■□□□ 1.8
TRIM3-209ENST00000529529 TROQ12816 1431 aaPredicted RBP26.28■■□□□ 1.8
TRIM3-209ENST00000529529 RICTORQ6R327 1708 aa26.26■■□□□ 1.79
TRIM3-209ENST00000529529 CLIP1P30622 1438 aa26.25■■□□□ 1.79
TRIM3-209ENST00000529529 CASKIN1Q8WXD9 1431 aa26.25■■□□□ 1.79
TRIM3-209ENST00000529529 HECW2Q9P2P5 1572 aa26.24■■□□□ 1.79
TRIM3-209ENST00000529529 KIF14Q15058 1648 aa26.22■■□□□ 1.79
TRIM3-209ENST00000529529 ADAMTSL3P82987 1691 aa26.22■■□□□ 1.79
TRIM3-209ENST00000529529 PTPRMP28827 1452 aa26.21■■□□□ 1.79
TRIM3-209ENST00000529529 YEATS2Q9ULM3 1422 aa26.21■■□□□ 1.79
TRIM3-209ENST00000529529 LRRIQ1Q96JM4 1722 aa26.19■■□□□ 1.78
TRIM3-209ENST00000529529 ARHGEF40Q8TER5 1519 aa26.19■■□□□ 1.78
TRIM3-209ENST00000529529 ZMYM4Q5VZL5 1548 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms