RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
CHRNA6-202ENST00000529467 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
CHRNA6-202ENST00000529467 ADAMTS12P58397 1594 aa11.12□□□□□ -0.63
CHRNA6-202ENST00000529467 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
CHRNA6-202ENST00000529467 BIVM-ERCC5R4GMW8 1640 aa11.12□□□□□ -0.63
CHRNA6-202ENST00000529467 SHROOM2Q13796 1616 aa11.1□□□□□ -0.63
CHRNA6-202ENST00000529467 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
CHRNA6-202ENST00000529467 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
CHRNA6-202ENST00000529467 PRG4Q92954 1404 aaPredicted RBP11.05□□□□□ -0.64
CHRNA6-202ENST00000529467 KIF13AQ9H1H9 1805 aa11.03□□□□□ -0.64
CHRNA6-202ENST00000529467 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CHRNA6-202ENST00000529467 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.65
CHRNA6-202ENST00000529467 IGF1RP08069 1367 aa10.96□□□□□ -0.65
CHRNA6-202ENST00000529467 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHRNA6-202ENST00000529467 ABCC10Q5T3U5 1492 aa10.95□□□□□ -0.66
CHRNA6-202ENST00000529467 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
CHRNA6-202ENST00000529467 MAPKBP1O60336 1514 aa10.93□□□□□ -0.66
CHRNA6-202ENST00000529467 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
CHRNA6-202ENST00000529467 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
CHRNA6-202ENST00000529467 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
CHRNA6-202ENST00000529467 DIP2BQ9P265 1576 aa10.9□□□□□ -0.66
CHRNA6-202ENST00000529467 CUL7Q14999 1698 aa10.88□□□□□ -0.67
CHRNA6-202ENST00000529467 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
CHRNA6-202ENST00000529467 PTPRGP23470 1445 aa10.86□□□□□ -0.67
CHRNA6-202ENST00000529467 TSPOAP1O95153 1857 aa10.86□□□□□ -0.67
CHRNA6-202ENST00000529467 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-202ENST00000529467 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
CHRNA6-202ENST00000529467 MAPK8IP2Q13387 824 aaPredicted RBP10.85□□□□□ -0.67
CHRNA6-202ENST00000529467 TTBK1Q5TCY1 1321 aaPredicted RBP10.84□□□□□ -0.67
CHRNA6-202ENST00000529467 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
CHRNA6-202ENST00000529467 KDM6BO15054 1643 aa10.83□□□□□ -0.68
CHRNA6-202ENST00000529467 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
CHRNA6-202ENST00000529467 ABCC2Q92887 1545 aa10.8□□□□□ -0.68
CHRNA6-202ENST00000529467 ASXL2Q76L83 1435 aa10.79□□□□□ -0.68
CHRNA6-202ENST00000529467 UHRF1BP1LA0JNW5 1464 aa10.79□□□□□ -0.68
CHRNA6-202ENST00000529467 IQGAP2Q13576 1575 aa10.78□□□□□ -0.68
CHRNA6-202ENST00000529467 PLB1Q6P1J6 1458 aa10.78□□□□□ -0.68
CHRNA6-202ENST00000529467 GLI2P10070 1586 aa10.77□□□□□ -0.68
CHRNA6-202ENST00000529467 UACAQ9BZF9 1416 aa10.77□□□□□ -0.68
CHRNA6-202ENST00000529467 PPRC1Q5VV67 1664 aaKnown RBP10.77□□□□□ -0.69
CHRNA6-202ENST00000529467 DISP1Q96F81 1524 aa10.77□□□□□ -0.69
CHRNA6-202ENST00000529467 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
CHRNA6-202ENST00000529467 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
CHRNA6-202ENST00000529467 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
CHRNA6-202ENST00000529467 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
CHRNA6-202ENST00000529467 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
CHRNA6-202ENST00000529467 MAP3K4Q9Y6R4 1608 aa10.7□□□□□ -0.7
CHRNA6-202ENST00000529467 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
CHRNA6-202ENST00000529467 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
CHRNA6-202ENST00000529467 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
CHRNA6-202ENST00000529467 TEX14Q8IWB6 1497 aa10.67□□□□□ -0.7
CHRNA6-202ENST00000529467 WDR7Q9Y4E6 1490 aa10.65□□□□□ -0.7
CHRNA6-202ENST00000529467 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
CHRNA6-202ENST00000529467 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
CHRNA6-202ENST00000529467 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
CHRNA6-202ENST00000529467 ABCA8O94911 1581 aa10.62□□□□□ -0.71
CHRNA6-202ENST00000529467 CD109Q6YHK3 1445 aa10.62□□□□□ -0.71
CHRNA6-202ENST00000529467 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
CHRNA6-202ENST00000529467 MAGI3Q5TCQ9 1506 aa10.61□□□□□ -0.71
CHRNA6-202ENST00000529467 PRXQ9BXM0 1461 aa10.61□□□□□ -0.71
CHRNA6-202ENST00000529467 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
CHRNA6-202ENST00000529467 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
CHRNA6-202ENST00000529467 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
CHRNA6-202ENST00000529467 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
CHRNA6-202ENST00000529467 ATP10BO94823 1461 aa10.55□□□□□ -0.72
CHRNA6-202ENST00000529467 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
CHRNA6-202ENST00000529467 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
CHRNA6-202ENST00000529467 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
CHRNA6-202ENST00000529467 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
CHRNA6-202ENST00000529467 PHLDB1Q86UU1 1377 aa10.52□□□□□ -0.73
CHRNA6-202ENST00000529467 HOXD11P31277 338 aaPredicted RBP10.51□□□□□ -0.73
CHRNA6-202ENST00000529467 KIF21BO75037 1637 aa10.51□□□□□ -0.73
CHRNA6-202ENST00000529467 ABCA9Q8IUA7 1624 aa10.5□□□□□ -0.73
CHRNA6-202ENST00000529467 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
CHRNA6-202ENST00000529467 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
CHRNA6-202ENST00000529467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
CHRNA6-202ENST00000529467 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
CHRNA6-202ENST00000529467 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
CHRNA6-202ENST00000529467 NEO1Q92859 1461 aa10.46□□□□□ -0.74
CHRNA6-202ENST00000529467 ADAMTSL3P82987 1691 aa10.46□□□□□ -0.74
CHRNA6-202ENST00000529467 PTPRMP28827 1452 aa10.44□□□□□ -0.74
CHRNA6-202ENST00000529467 NUP153P49790 1475 aaKnown RBP10.44□□□□□ -0.74
CHRNA6-202ENST00000529467 CNKSR2Q8WXI2 1034 aa10.44□□□□□ -0.74
CHRNA6-202ENST00000529467 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
CHRNA6-202ENST00000529467 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
CHRNA6-202ENST00000529467 FRMPD1Q5SYB0 1578 aa10.42□□□□□ -0.74
CHRNA6-202ENST00000529467 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
CHRNA6-202ENST00000529467 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
CHRNA6-202ENST00000529467 ARID4BQ4LE39 1312 aaPredicted RBP10.41□□□□□ -0.74
CHRNA6-202ENST00000529467 FBXO41Q8TF61 875 aa10.4□□□□□ -0.74
CHRNA6-202ENST00000529467 EEA1Q15075 1411 aa10.4□□□□□ -0.75
CHRNA6-202ENST00000529467 AKNAQ7Z591 1439 aa10.4□□□□□ -0.75
CHRNA6-202ENST00000529467 DENND4BO75064 1496 aaPredicted RBP10.39□□□□□ -0.75
CHRNA6-202ENST00000529467 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
CHRNA6-202ENST00000529467 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
CHRNA6-202ENST00000529467 RICTORQ6R327 1708 aa10.38□□□□□ -0.75
CHRNA6-202ENST00000529467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHRNA6-202ENST00000529467 FANCAO15360 1455 aa10.36□□□□□ -0.75
CHRNA6-202ENST00000529467 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
CHRNA6-202ENST00000529467 PCF11O94913 1555 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms