RNA–Protein interactions for RNA: ENST00000529395.1

ATG13-214, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-214ENST00000529395 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
ATG13-214ENST00000529395 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
ATG13-214ENST00000529395 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
ATG13-214ENST00000529395 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
ATG13-214ENST00000529395 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
ATG13-214ENST00000529395 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
ATG13-214ENST00000529395 APLP2Q06481 763 aa16.6■□□□□ 0.25
ATG13-214ENST00000529395 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
ATG13-214ENST00000529395 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
ATG13-214ENST00000529395 FBLN2P98095 1184 aa16.55■□□□□ 0.24
ATG13-214ENST00000529395 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
ATG13-214ENST00000529395 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
ATG13-214ENST00000529395 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
ATG13-214ENST00000529395 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
ATG13-214ENST00000529395 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
ATG13-214ENST00000529395 NUP160Q12769 1436 aa16.49■□□□□ 0.23
ATG13-214ENST00000529395 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
ATG13-214ENST00000529395 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
ATG13-214ENST00000529395 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
ATG13-214ENST00000529395 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
ATG13-214ENST00000529395 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
ATG13-214ENST00000529395 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
ATG13-214ENST00000529395 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
ATG13-214ENST00000529395 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
ATG13-214ENST00000529395 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
ATG13-214ENST00000529395 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
ATG13-214ENST00000529395 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
ATG13-214ENST00000529395 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
ATG13-214ENST00000529395 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
ATG13-214ENST00000529395 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
ATG13-214ENST00000529395 CHD1O14646 1710 aa16.36■□□□□ 0.21
ATG13-214ENST00000529395 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
ATG13-214ENST00000529395 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
ATG13-214ENST00000529395 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
ATG13-214ENST00000529395 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
ATG13-214ENST00000529395 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
ATG13-214ENST00000529395 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
ATG13-214ENST00000529395 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
ATG13-214ENST00000529395 EPRSP07814 1512 aaKnown RBP16.22■□□□□ 0.19
ATG13-214ENST00000529395 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
ATG13-214ENST00000529395 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
ATG13-214ENST00000529395 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
ATG13-214ENST00000529395 PTPRGP23470 1445 aa16.19■□□□□ 0.18
ATG13-214ENST00000529395 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
ATG13-214ENST00000529395 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
ATG13-214ENST00000529395 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
ATG13-214ENST00000529395 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
ATG13-214ENST00000529395 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
ATG13-214ENST00000529395 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ATG13-214ENST00000529395 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
ATG13-214ENST00000529395 ABCA8O94911 1581 aa16.15■□□□□ 0.18
ATG13-214ENST00000529395 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
ATG13-214ENST00000529395 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
ATG13-214ENST00000529395 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
ATG13-214ENST00000529395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
ATG13-214ENST00000529395 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
ATG13-214ENST00000529395 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
ATG13-214ENST00000529395 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
ATG13-214ENST00000529395 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
ATG13-214ENST00000529395 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
ATG13-214ENST00000529395 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
ATG13-214ENST00000529395 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
ATG13-214ENST00000529395 HRCP23327 699 aa16.08■□□□□ 0.16
ATG13-214ENST00000529395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATG13-214ENST00000529395 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
ATG13-214ENST00000529395 ATP10BO94823 1461 aa16.06■□□□□ 0.16
ATG13-214ENST00000529395 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
ATG13-214ENST00000529395 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
ATG13-214ENST00000529395 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
ATG13-214ENST00000529395 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
ATG13-214ENST00000529395 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
ATG13-214ENST00000529395 ABCC2Q92887 1545 aa16.01■□□□□ 0.15
ATG13-214ENST00000529395 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
ATG13-214ENST00000529395 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
ATG13-214ENST00000529395 MIA2Q96PC5 1412 aa16■□□□□ 0.15
ATG13-214ENST00000529395 ITGAEP38570 1179 aa15.98■□□□□ 0.15
ATG13-214ENST00000529395 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
ATG13-214ENST00000529395 ADCY10Q96PN6 1610 aa15.96■□□□□ 0.15
ATG13-214ENST00000529395 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
ATG13-214ENST00000529395 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
ATG13-214ENST00000529395 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
ATG13-214ENST00000529395 KIF14Q15058 1648 aa15.92■□□□□ 0.14
ATG13-214ENST00000529395 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
ATG13-214ENST00000529395 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
ATG13-214ENST00000529395 ABCC10Q5T3U5 1492 aa15.89■□□□□ 0.13
ATG13-214ENST00000529395 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
ATG13-214ENST00000529395 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
ATG13-214ENST00000529395 SETD5Q9C0A6 1442 aa15.87■□□□□ 0.13
ATG13-214ENST00000529395 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
ATG13-214ENST00000529395 RAB3GAP2Q9H2M9 1393 aa15.83■□□□□ 0.12
ATG13-214ENST00000529395 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
ATG13-214ENST00000529395 ZNF644Q9H582 1327 aaPredicted RBP15.82■□□□□ 0.12
ATG13-214ENST00000529395 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
ATG13-214ENST00000529395 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
ATG13-214ENST00000529395 CAMSAP2Q08AD1 1489 aa15.8■□□□□ 0.12
ATG13-214ENST00000529395 CDC42BPAQ5VT25 1732 aa15.8■□□□□ 0.12
ATG13-214ENST00000529395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATG13-214ENST00000529395 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
ATG13-214ENST00000529395 DAPK1P53355 1430 aa15.79■□□□□ 0.12
ATG13-214ENST00000529395 ABCC5O15440 1437 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms