RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 KDM6BO15054 1643 aa25.82■■□□□ 1.72
TRIM3-208ENST00000529058 MAPKBP1O60336 1514 aa25.82■■□□□ 1.72
TRIM3-208ENST00000529058 NPM1P06748 294 aaKnown RBP eCLIP25.79■■□□□ 1.72
TRIM3-208ENST00000529058 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
TRIM3-208ENST00000529058 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
TRIM3-208ENST00000529058 TSPOAP1O95153 1857 aa25.72■■□□□ 1.71
TRIM3-208ENST00000529058 ADCY10Q96PN6 1610 aa25.71■■□□□ 1.71
TRIM3-208ENST00000529058 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
TRIM3-208ENST00000529058 TOP2BQ02880 1626 aa25.69■■□□□ 1.7
TRIM3-208ENST00000529058 RUSC2Q8N2Y8 1516 aa25.67■■□□□ 1.7
TRIM3-208ENST00000529058 ADGRL1O94910 1474 aa25.5■■□□□ 1.67
TRIM3-208ENST00000529058 KIAA0586Q9BVV6 1533 aa25.43■■□□□ 1.66
TRIM3-208ENST00000529058 PPRC1Q5VV67 1664 aaKnown RBP25.43■■□□□ 1.66
TRIM3-208ENST00000529058 HECW2Q9P2P5 1572 aa25.43■■□□□ 1.66
TRIM3-208ENST00000529058 GLI2P10070 1586 aa25.37■■□□□ 1.65
TRIM3-208ENST00000529058 PTPRGP23470 1445 aa25.35■■□□□ 1.65
TRIM3-208ENST00000529058 ABCC2Q92887 1545 aa25.34■■□□□ 1.65
TRIM3-208ENST00000529058 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
TRIM3-208ENST00000529058 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
TRIM3-208ENST00000529058 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
TRIM3-208ENST00000529058 CUL7Q14999 1698 aa25.28■■□□□ 1.64
TRIM3-208ENST00000529058 TTBK1Q5TCY1 1321 aaPredicted RBP25.27■■□□□ 1.64
TRIM3-208ENST00000529058 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
TRIM3-208ENST00000529058 TNIKQ9UKE5 1360 aa25.24■■□□□ 1.63
TRIM3-208ENST00000529058 IGF1RP08069 1367 aa25.23■■□□□ 1.63
TRIM3-208ENST00000529058 MAP3K4Q9Y6R4 1608 aa25.22■■□□□ 1.63
TRIM3-208ENST00000529058 CARMIL2Q6F5E8 1435 aa25.21■■□□□ 1.63
TRIM3-208ENST00000529058 UHRF1BP1LA0JNW5 1464 aa25.2■■□□□ 1.62
TRIM3-208ENST00000529058 TEX14Q8IWB6 1497 aa25.2■■□□□ 1.62
TRIM3-208ENST00000529058 EPRSP07814 1512 aaKnown RBP25.17■■□□□ 1.62
TRIM3-208ENST00000529058 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
TRIM3-208ENST00000529058 UACAQ9BZF9 1416 aa25.13■■□□□ 1.61
TRIM3-208ENST00000529058 FBXO41Q8TF61 875 aa25.12■■□□□ 1.61
TRIM3-208ENST00000529058 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
TRIM3-208ENST00000529058 IQGAP2Q13576 1575 aa25.1■■□□□ 1.61
TRIM3-208ENST00000529058 ZCCHC11Q5TAX3 1644 aaKnown RBP25.07■■□□□ 1.6
TRIM3-208ENST00000529058 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
TRIM3-208ENST00000529058 DISP1Q96F81 1524 aa25.02■■□□□ 1.6
TRIM3-208ENST00000529058 WDR7Q9Y4E6 1490 aa24.95■■□□□ 1.58
TRIM3-208ENST00000529058 KIF21BO75037 1637 aa24.93■■□□□ 1.58
TRIM3-208ENST00000529058 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
TRIM3-208ENST00000529058 CFAP43Q8NDM7 1665 aa24.91■■□□□ 1.58
TRIM3-208ENST00000529058 UGGT2Q9NYU1 1516 aa24.9■■□□□ 1.58
TRIM3-208ENST00000529058 CD109Q6YHK3 1445 aa24.88■■□□□ 1.57
TRIM3-208ENST00000529058 KIAA0556O60303 1618 aa24.88■■□□□ 1.57
TRIM3-208ENST00000529058 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
TRIM3-208ENST00000529058 PTPRMP28827 1452 aa24.78■■□□□ 1.56
TRIM3-208ENST00000529058 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
TRIM3-208ENST00000529058 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
TRIM3-208ENST00000529058 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
TRIM3-208ENST00000529058 ABCA8O94911 1581 aa24.7■■□□□ 1.54
TRIM3-208ENST00000529058 PCF11O94913 1555 aaKnown RBP24.7■■□□□ 1.54
TRIM3-208ENST00000529058 LMTK3Q96Q04 1460 aa24.7■■□□□ 1.54
TRIM3-208ENST00000529058 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.54
TRIM3-208ENST00000529058 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.53
TRIM3-208ENST00000529058 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
TRIM3-208ENST00000529058 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
TRIM3-208ENST00000529058 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
TRIM3-208ENST00000529058 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
TRIM3-208ENST00000529058 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
TRIM3-208ENST00000529058 ARID4BQ4LE39 1312 aaPredicted RBP24.53■■□□□ 1.52
TRIM3-208ENST00000529058 RIMS1Q86UR5 1692 aaKnown RBP24.52■■□□□ 1.52
TRIM3-208ENST00000529058 NEO1Q92859 1461 aa24.5■■□□□ 1.51
TRIM3-208ENST00000529058 FRMPD1Q5SYB0 1578 aa24.5■■□□□ 1.51
TRIM3-208ENST00000529058 CERKQ8TCT0 537 aa24.48■■□□□ 1.51
TRIM3-208ENST00000529058 ATP10BO94823 1461 aa24.47■■□□□ 1.51
TRIM3-208ENST00000529058 ARID3CA6NKF2 412 aa24.47■■□□□ 1.51
TRIM3-208ENST00000529058 HSPA2P54652 639 aa24.47■■□□□ 1.51
TRIM3-208ENST00000529058 SOCS7O14512 581 aa24.43■■□□□ 1.5
TRIM3-208ENST00000529058 ARHGEF40Q8TER5 1519 aa24.42■■□□□ 1.5
TRIM3-208ENST00000529058 ILDR2Q71H61 639 aa24.42■■□□□ 1.5
TRIM3-208ENST00000529058 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
TRIM3-208ENST00000529058 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
TRIM3-208ENST00000529058 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
TRIM3-208ENST00000529058 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
TRIM3-208ENST00000529058 POGZQ7Z3K3 1410 aa24.33■■□□□ 1.49
TRIM3-208ENST00000529058 FANCAO15360 1455 aa24.31■■□□□ 1.48
TRIM3-208ENST00000529058 DENND4BO75064 1496 aaPredicted RBP24.31■■□□□ 1.48
TRIM3-208ENST00000529058 P3H3Q8IVL6 736 aa24.3■■□□□ 1.48
TRIM3-208ENST00000529058 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
TRIM3-208ENST00000529058 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
TRIM3-208ENST00000529058 SIGLEC1Q9BZZ2 1709 aa24.27■■□□□ 1.48
TRIM3-208ENST00000529058 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
TRIM3-208ENST00000529058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
TRIM3-208ENST00000529058 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
TRIM3-208ENST00000529058 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
TRIM3-208ENST00000529058 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
TRIM3-208ENST00000529058 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
TRIM3-208ENST00000529058 CFAP74Q9C0B2 1584 aa24.24■■□□□ 1.47
TRIM3-208ENST00000529058 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
TRIM3-208ENST00000529058 EFCAB5A4FU69 1503 aa24.22■■□□□ 1.47
TRIM3-208ENST00000529058 ZFYVE16Q7Z3T8 1539 aa24.22■■□□□ 1.47
TRIM3-208ENST00000529058 SPATA31D1Q6ZQQ2 1576 aa24.21■■□□□ 1.47
TRIM3-208ENST00000529058 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
TRIM3-208ENST00000529058 SAMD9Q5K651 1589 aa24.2■■□□□ 1.47
TRIM3-208ENST00000529058 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
TRIM3-208ENST00000529058 MLECQ14165 292 aa24.18■■□□□ 1.46
TRIM3-208ENST00000529058 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
TRIM3-208ENST00000529058 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
TRIM3-208ENST00000529058 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms