RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
PUF60-213ENST00000528999 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
PUF60-213ENST00000528999 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
PUF60-213ENST00000528999 FYCO1Q9BQS8 1478 aa15.93■□□□□ 0.14
PUF60-213ENST00000528999 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
PUF60-213ENST00000528999 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
PUF60-213ENST00000528999 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
PUF60-213ENST00000528999 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
PUF60-213ENST00000528999 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
PUF60-213ENST00000528999 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
PUF60-213ENST00000528999 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
PUF60-213ENST00000528999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
PUF60-213ENST00000528999 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
PUF60-213ENST00000528999 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
PUF60-213ENST00000528999 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
PUF60-213ENST00000528999 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
PUF60-213ENST00000528999 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
PUF60-213ENST00000528999 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
PUF60-213ENST00000528999 WDR62O43379 1518 aa15.82■□□□□ 0.12
PUF60-213ENST00000528999 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
PUF60-213ENST00000528999 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
PUF60-213ENST00000528999 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
PUF60-213ENST00000528999 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
PUF60-213ENST00000528999 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
PUF60-213ENST00000528999 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
PUF60-213ENST00000528999 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
PUF60-213ENST00000528999 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
PUF60-213ENST00000528999 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
PUF60-213ENST00000528999 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
PUF60-213ENST00000528999 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
PUF60-213ENST00000528999 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
PUF60-213ENST00000528999 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
PUF60-213ENST00000528999 UGGT2Q9NYU1 1516 aa15.7■□□□□ 0.1
PUF60-213ENST00000528999 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
PUF60-213ENST00000528999 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
PUF60-213ENST00000528999 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
PUF60-213ENST00000528999 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
PUF60-213ENST00000528999 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
PUF60-213ENST00000528999 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
PUF60-213ENST00000528999 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
PUF60-213ENST00000528999 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
PUF60-213ENST00000528999 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
PUF60-213ENST00000528999 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
PUF60-213ENST00000528999 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
PUF60-213ENST00000528999 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
PUF60-213ENST00000528999 ITGAEP38570 1179 aa15.62■□□□□ 0.09
PUF60-213ENST00000528999 MYOM3Q5VTT5 1437 aa15.61■□□□□ 0.09
PUF60-213ENST00000528999 SUPT6HQ7KZ85 1726 aaKnown RBP15.61■□□□□ 0.09
PUF60-213ENST00000528999 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
PUF60-213ENST00000528999 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
PUF60-213ENST00000528999 NCOA2Q15596 1464 aa15.6■□□□□ 0.09
PUF60-213ENST00000528999 MIA2Q96PC5 1412 aa15.57■□□□□ 0.08
PUF60-213ENST00000528999 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
PUF60-213ENST00000528999 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
PUF60-213ENST00000528999 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
PUF60-213ENST00000528999 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
PUF60-213ENST00000528999 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
PUF60-213ENST00000528999 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
PUF60-213ENST00000528999 LRRIQ1Q96JM4 1722 aa15.54■□□□□ 0.08
PUF60-213ENST00000528999 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
PUF60-213ENST00000528999 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
PUF60-213ENST00000528999 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
PUF60-213ENST00000528999 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
PUF60-213ENST00000528999 KIAA0556O60303 1618 aa15.52■□□□□ 0.08
PUF60-213ENST00000528999 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
PUF60-213ENST00000528999 NUP160Q12769 1436 aa15.5■□□□□ 0.07
PUF60-213ENST00000528999 CARMIL2Q6F5E8 1435 aa15.5■□□□□ 0.07
PUF60-213ENST00000528999 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
PUF60-213ENST00000528999 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
PUF60-213ENST00000528999 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
PUF60-213ENST00000528999 NAIPQ13075 1403 aa15.46■□□□□ 0.07
PUF60-213ENST00000528999 PTPRKQ15262 1439 aa15.45■□□□□ 0.06
PUF60-213ENST00000528999 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
PUF60-213ENST00000528999 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
PUF60-213ENST00000528999 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
PUF60-213ENST00000528999 CEP170Q5SW79 1584 aa15.42■□□□□ 0.06
PUF60-213ENST00000528999 ROCK1Q13464 1354 aa15.42■□□□□ 0.06
PUF60-213ENST00000528999 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
PUF60-213ENST00000528999 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
PUF60-213ENST00000528999 MIER1Q8N108 512 aa15.4■□□□□ 0.06
PUF60-213ENST00000528999 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
PUF60-213ENST00000528999 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
PUF60-213ENST00000528999 FBLN2P98095 1184 aa15.34■□□□□ 0.05
PUF60-213ENST00000528999 GCC2Q8IWJ2 1684 aa15.34■□□□□ 0.05
PUF60-213ENST00000528999 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
PUF60-213ENST00000528999 ADCY10Q96PN6 1610 aa15.32■□□□□ 0.04
PUF60-213ENST00000528999 TONSLQ96HA7 1378 aa15.31■□□□□ 0.04
PUF60-213ENST00000528999 DAPK1P53355 1430 aa15.31■□□□□ 0.04
PUF60-213ENST00000528999 ABCA8O94911 1581 aa15.31■□□□□ 0.04
PUF60-213ENST00000528999 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
PUF60-213ENST00000528999 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
PUF60-213ENST00000528999 DNMT1P26358 1616 aaKnown RBP15.29■□□□□ 0.04
PUF60-213ENST00000528999 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
PUF60-213ENST00000528999 ABCC5O15440 1437 aa15.29■□□□□ 0.04
PUF60-213ENST00000528999 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
PUF60-213ENST00000528999 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
PUF60-213ENST00000528999 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
PUF60-213ENST00000528999 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.03
PUF60-213ENST00000528999 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
PUF60-213ENST00000528999 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms