RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
CAPN1-216ENST00000528739 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
CAPN1-216ENST00000528739 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
CAPN1-216ENST00000528739 KIAA0586Q9BVV6 1533 aa24.08■■□□□ 1.45
CAPN1-216ENST00000528739 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-216ENST00000528739 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
CAPN1-216ENST00000528739 NPM1P06748 294 aaKnown RBP eCLIP23.95■■□□□ 1.42
CAPN1-216ENST00000528739 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
CAPN1-216ENST00000528739 CARMIL2Q6F5E8 1435 aa23.92■■□□□ 1.42
CAPN1-216ENST00000528739 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
CAPN1-216ENST00000528739 IQGAP2Q13576 1575 aa23.89■■□□□ 1.41
CAPN1-216ENST00000528739 PTPRGP23470 1445 aa23.86■■□□□ 1.41
CAPN1-216ENST00000528739 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
CAPN1-216ENST00000528739 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
CAPN1-216ENST00000528739 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
CAPN1-216ENST00000528739 EEA1Q15075 1411 aa23.76■■□□□ 1.39
CAPN1-216ENST00000528739 DISP1Q96F81 1524 aa23.73■■□□□ 1.39
CAPN1-216ENST00000528739 UGGT2Q9NYU1 1516 aa23.73■■□□□ 1.39
CAPN1-216ENST00000528739 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
CAPN1-216ENST00000528739 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
CAPN1-216ENST00000528739 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.39
CAPN1-216ENST00000528739 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
CAPN1-216ENST00000528739 CTTNBP2Q8WZ74 1663 aa23.68■■□□□ 1.38
CAPN1-216ENST00000528739 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
CAPN1-216ENST00000528739 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
CAPN1-216ENST00000528739 UACAQ9BZF9 1416 aa23.66■■□□□ 1.38
CAPN1-216ENST00000528739 KIAA0556O60303 1618 aa23.65■■□□□ 1.38
CAPN1-216ENST00000528739 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
CAPN1-216ENST00000528739 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
CAPN1-216ENST00000528739 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
CAPN1-216ENST00000528739 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
CAPN1-216ENST00000528739 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
CAPN1-216ENST00000528739 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
CAPN1-216ENST00000528739 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
CAPN1-216ENST00000528739 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
CAPN1-216ENST00000528739 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
CAPN1-216ENST00000528739 DIP2BQ9P265 1576 aa23.47■■□□□ 1.35
CAPN1-216ENST00000528739 KIF21BO75037 1637 aa23.46■■□□□ 1.35
CAPN1-216ENST00000528739 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
CAPN1-216ENST00000528739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-216ENST00000528739 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
CAPN1-216ENST00000528739 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
CAPN1-216ENST00000528739 ZCCHC11Q5TAX3 1644 aaKnown RBP23.41■■□□□ 1.34
CAPN1-216ENST00000528739 ABCA8O94911 1581 aa23.39■■□□□ 1.33
CAPN1-216ENST00000528739 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
CAPN1-216ENST00000528739 SAMD9Q5K651 1589 aa23.36■■□□□ 1.33
CAPN1-216ENST00000528739 TSPOAP1O95153 1857 aa23.36■■□□□ 1.33
CAPN1-216ENST00000528739 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.33
CAPN1-216ENST00000528739 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
CAPN1-216ENST00000528739 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-216ENST00000528739 GLI2P10070 1586 aa23.28■■□□□ 1.32
CAPN1-216ENST00000528739 ATP10BO94823 1461 aa23.27■■□□□ 1.32
CAPN1-216ENST00000528739 EFCAB5A4FU69 1503 aa23.27■■□□□ 1.32
CAPN1-216ENST00000528739 RAPGEF6Q8TEU7 1601 aa23.26■■□□□ 1.31
CAPN1-216ENST00000528739 KDM6BO15054 1643 aa23.22■■□□□ 1.31
CAPN1-216ENST00000528739 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
CAPN1-216ENST00000528739 PLEKHD1A6NEE1 506 aa23.2■■□□□ 1.3
CAPN1-216ENST00000528739 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-216ENST00000528739 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
CAPN1-216ENST00000528739 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
CAPN1-216ENST00000528739 ARHGAP35Q9NRY4 1499 aa23.16■■□□□ 1.3
CAPN1-216ENST00000528739 MAP3K4Q9Y6R4 1608 aa23.15■■□□□ 1.3
CAPN1-216ENST00000528739 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
CAPN1-216ENST00000528739 PPRC1Q5VV67 1664 aaKnown RBP23.12■■□□□ 1.29
CAPN1-216ENST00000528739 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
CAPN1-216ENST00000528739 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-216ENST00000528739 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
CAPN1-216ENST00000528739 CDK13Q14004 1512 aaKnown RBP23.04■■□□□ 1.28
CAPN1-216ENST00000528739 COL17A1Q9UMD9 1497 aaPredicted RBP23.03■■□□□ 1.28
CAPN1-216ENST00000528739 CLIP1P30622 1438 aa23.02■■□□□ 1.28
CAPN1-216ENST00000528739 HECW1Q76N89 1606 aa23■■□□□ 1.27
CAPN1-216ENST00000528739 ABCA9Q8IUA7 1624 aa22.97■■□□□ 1.27
CAPN1-216ENST00000528739 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
CAPN1-216ENST00000528739 PHLDB1Q86UU1 1377 aa22.92■■□□□ 1.26
CAPN1-216ENST00000528739 RAPGEF3O95398 923 aa22.91■■□□□ 1.26
CAPN1-216ENST00000528739 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
CAPN1-216ENST00000528739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.251e-9■■■■□ 24
CAPN1-216ENST00000528739 NEO1Q92859 1461 aa22.87■■□□□ 1.25
CAPN1-216ENST00000528739 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
CAPN1-216ENST00000528739 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
CAPN1-216ENST00000528739 ARAP3Q8WWN8 1544 aa22.86■■□□□ 1.25
CAPN1-216ENST00000528739 FANCAO15360 1455 aa22.85■■□□□ 1.25
CAPN1-216ENST00000528739 TROQ12816 1431 aaPredicted RBP22.84■■□□□ 1.25
CAPN1-216ENST00000528739 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CAPN1-216ENST00000528739 CCDC18Q5T9S5 1454 aa22.84■■□□□ 1.25
CAPN1-216ENST00000528739 AKNAQ7Z591 1439 aa22.83■■□□□ 1.25
CAPN1-216ENST00000528739 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.25
CAPN1-216ENST00000528739 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
CAPN1-216ENST00000528739 EFCAB2Q5VUJ9 269 aa22.81■■□□□ 1.24
CAPN1-216ENST00000528739 PLCH2O75038 1416 aa22.79■■□□□ 1.24
CAPN1-216ENST00000528739 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
CAPN1-216ENST00000528739 KIF14Q15058 1648 aa22.79■■□□□ 1.24
CAPN1-216ENST00000528739 ADGRL1O94910 1474 aa22.75■■□□□ 1.23
CAPN1-216ENST00000528739 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
CAPN1-216ENST00000528739 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
CAPN1-216ENST00000528739 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
CAPN1-216ENST00000528739 CFAP74Q9C0B2 1584 aa22.75■■□□□ 1.23
CAPN1-216ENST00000528739 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
CAPN1-216ENST00000528739 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
CAPN1-216ENST00000528739 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms