RNA–Protein interactions for RNA: ENST00000528300.5

LINC01588-202, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2 BASIC

Gene LINC01588, Length 3,208 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-202ENST00000528300 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
LINC01588-202ENST00000528300 DHX37Q8IY37 1157 aaKnown RBP11.82□□□□□ -0.52
LINC01588-202ENST00000528300 EEA1Q15075 1411 aa11.82□□□□□ -0.52
LINC01588-202ENST00000528300 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
LINC01588-202ENST00000528300 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
LINC01588-202ENST00000528300 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
LINC01588-202ENST00000528300 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
LINC01588-202ENST00000528300 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
LINC01588-202ENST00000528300 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
LINC01588-202ENST00000528300 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
LINC01588-202ENST00000528300 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
LINC01588-202ENST00000528300 ANP32EQ9BTT0 268 aa11.74□□□□□ -0.53
LINC01588-202ENST00000528300 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
LINC01588-202ENST00000528300 RGL2O15211 777 aa11.71□□□□□ -0.53
LINC01588-202ENST00000528300 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
LINC01588-202ENST00000528300 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
LINC01588-202ENST00000528300 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
LINC01588-202ENST00000528300 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
LINC01588-202ENST00000528300 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
LINC01588-202ENST00000528300 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
LINC01588-202ENST00000528300 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
LINC01588-202ENST00000528300 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
LINC01588-202ENST00000528300 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
LINC01588-202ENST00000528300 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
LINC01588-202ENST00000528300 ABCC8Q09428 1581 aa11.65□□□□□ -0.55
LINC01588-202ENST00000528300 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
LINC01588-202ENST00000528300 KIF21BO75037 1637 aa11.64□□□□□ -0.55
LINC01588-202ENST00000528300 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
LINC01588-202ENST00000528300 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
LINC01588-202ENST00000528300 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
LINC01588-202ENST00000528300 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
LINC01588-202ENST00000528300 PDIA4P13667 645 aaKnown RBP11.61□□□□□ -0.55
LINC01588-202ENST00000528300 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
LINC01588-202ENST00000528300 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
LINC01588-202ENST00000528300 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
LINC01588-202ENST00000528300 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
LINC01588-202ENST00000528300 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
LINC01588-202ENST00000528300 FOXD4L4Q8WXT5 416 aaPredicted RBP11.57□□□□□ -0.56
LINC01588-202ENST00000528300 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
LINC01588-202ENST00000528300 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
LINC01588-202ENST00000528300 TOP2BQ02880 1626 aa11.54□□□□□ -0.56
LINC01588-202ENST00000528300 CEP162Q5TB80 1403 aa11.53□□□□□ -0.56
LINC01588-202ENST00000528300 SYNJ1O43426 1573 aa11.52□□□□□ -0.56
LINC01588-202ENST00000528300 POLR3GLQ9BT43 218 aa11.52□□□□□ -0.56
LINC01588-202ENST00000528300 APBB1O00213 710 aa11.5□□□□□ -0.57
LINC01588-202ENST00000528300 RAD21O60216 631 aa11.5□□□□□ -0.57
LINC01588-202ENST00000528300 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
LINC01588-202ENST00000528300 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
LINC01588-202ENST00000528300 KCTD17Q8N5Z5 321 aa11.49□□□□□ -0.57
LINC01588-202ENST00000528300 SOGA1O94964 1423 aa11.48□□□□□ -0.57
LINC01588-202ENST00000528300 ERICH3Q5RHP9 1530 aa11.47□□□□□ -0.57
LINC01588-202ENST00000528300 MTMR7Q9Y216 660 aa11.46□□□□□ -0.58
LINC01588-202ENST00000528300 ZMYND15Q9H091 742 aa11.45□□□□□ -0.58
LINC01588-202ENST00000528300 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
LINC01588-202ENST00000528300 UBE2Q2Q8WVN8 375 aa11.44□□□□□ -0.58
LINC01588-202ENST00000528300 SLC24A3Q9HC58 644 aa11.44□□□□□ -0.58
LINC01588-202ENST00000528300 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
LINC01588-202ENST00000528300 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01588-202ENST00000528300 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
LINC01588-202ENST00000528300 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
LINC01588-202ENST00000528300 RUSC2Q8N2Y8 1516 aa11.39□□□□□ -0.59
LINC01588-202ENST00000528300 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
LINC01588-202ENST00000528300 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
LINC01588-202ENST00000528300 CFTRP13569 1480 aa11.36□□□□□ -0.59
LINC01588-202ENST00000528300 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
LINC01588-202ENST00000528300 CLIP1P30622 1438 aa11.34□□□□□ -0.59
LINC01588-202ENST00000528300 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
LINC01588-202ENST00000528300 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
LINC01588-202ENST00000528300 IL27Q8NEV9 243 aa11.34□□□□□ -0.59
LINC01588-202ENST00000528300 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.59
LINC01588-202ENST00000528300 USP35Q9P2H5 1018 aa11.33□□□□□ -0.6
LINC01588-202ENST00000528300 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
LINC01588-202ENST00000528300 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
LINC01588-202ENST00000528300 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
LINC01588-202ENST00000528300 CUX1P39880 1505 aa11.29□□□□□ -0.6
LINC01588-202ENST00000528300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01588-202ENST00000528300 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
LINC01588-202ENST00000528300 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
LINC01588-202ENST00000528300 RAPGEF2Q9Y4G8 1499 aa11.27□□□□□ -0.6
LINC01588-202ENST00000528300 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
LINC01588-202ENST00000528300 PDE4CQ08493 712 aa11.25□□□□□ -0.61
LINC01588-202ENST00000528300 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
LINC01588-202ENST00000528300 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
LINC01588-202ENST00000528300 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
LINC01588-202ENST00000528300 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
LINC01588-202ENST00000528300 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
LINC01588-202ENST00000528300 RGS22Q8NE09 1264 aa11.21□□□□□ -0.62
LINC01588-202ENST00000528300 CLSPNQ9HAW4 1339 aa11.2□□□□□ -0.62
LINC01588-202ENST00000528300 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
LINC01588-202ENST00000528300 CADPSQ9ULU8 1353 aa11.17□□□□□ -0.62
LINC01588-202ENST00000528300 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
LINC01588-202ENST00000528300 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
LINC01588-202ENST00000528300 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
LINC01588-202ENST00000528300 CUL7Q14999 1698 aa11.15□□□□□ -0.62
LINC01588-202ENST00000528300 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
LINC01588-202ENST00000528300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
LINC01588-202ENST00000528300 GZF1Q9H116 711 aaPredicted RBP11.14□□□□□ -0.63
LINC01588-202ENST00000528300 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
LINC01588-202ENST00000528300 ERICH6BQ5W0A0 696 aa11.14□□□□□ -0.63
LINC01588-202ENST00000528300 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms