RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
CHD7-208ENST00000528280 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
CHD7-208ENST00000528280 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
CHD7-208ENST00000528280 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
CHD7-208ENST00000528280 CUL7Q14999 1698 aa16.32■□□□□ 0.2
CHD7-208ENST00000528280 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
CHD7-208ENST00000528280 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
CHD7-208ENST00000528280 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
CHD7-208ENST00000528280 KDM6BO15054 1643 aa16.29■□□□□ 0.2
CHD7-208ENST00000528280 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
CHD7-208ENST00000528280 DIP2BQ9P265 1576 aa16.24■□□□□ 0.19
CHD7-208ENST00000528280 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
CHD7-208ENST00000528280 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHD7-208ENST00000528280 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
CHD7-208ENST00000528280 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
CHD7-208ENST00000528280 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
CHD7-208ENST00000528280 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
CHD7-208ENST00000528280 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
CHD7-208ENST00000528280 PTPRGP23470 1445 aa16.12■□□□□ 0.17
CHD7-208ENST00000528280 ADCY10Q96PN6 1610 aa16.12■□□□□ 0.17
CHD7-208ENST00000528280 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
CHD7-208ENST00000528280 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
CHD7-208ENST00000528280 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
CHD7-208ENST00000528280 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
CHD7-208ENST00000528280 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
CHD7-208ENST00000528280 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
CHD7-208ENST00000528280 EEA1Q15075 1411 aa16.05■□□□□ 0.16
CHD7-208ENST00000528280 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
CHD7-208ENST00000528280 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
CHD7-208ENST00000528280 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
CHD7-208ENST00000528280 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
CHD7-208ENST00000528280 GOLGA3Q08378 1498 aa16■□□□□ 0.15
CHD7-208ENST00000528280 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
CHD7-208ENST00000528280 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
CHD7-208ENST00000528280 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
CHD7-208ENST00000528280 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
CHD7-208ENST00000528280 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
CHD7-208ENST00000528280 GLI2P10070 1586 aa15.94■□□□□ 0.14
CHD7-208ENST00000528280 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
CHD7-208ENST00000528280 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
CHD7-208ENST00000528280 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
CHD7-208ENST00000528280 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
CHD7-208ENST00000528280 ASXL2Q76L83 1435 aa15.87■□□□□ 0.13
CHD7-208ENST00000528280 KDM5BQ9UGL1 1544 aa15.87■□□□□ 0.13
CHD7-208ENST00000528280 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
CHD7-208ENST00000528280 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
CHD7-208ENST00000528280 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
CHD7-208ENST00000528280 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
CHD7-208ENST00000528280 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
CHD7-208ENST00000528280 KIF21BO75037 1637 aa15.78■□□□□ 0.12
CHD7-208ENST00000528280 ABCA8O94911 1581 aa15.78■□□□□ 0.12
CHD7-208ENST00000528280 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
CHD7-208ENST00000528280 ZCCHC11Q5TAX3 1644 aaKnown RBP15.76■□□□□ 0.11
CHD7-208ENST00000528280 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
CHD7-208ENST00000528280 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
CHD7-208ENST00000528280 WDR7Q9Y4E6 1490 aa15.75■□□□□ 0.11
CHD7-208ENST00000528280 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
CHD7-208ENST00000528280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
CHD7-208ENST00000528280 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
CHD7-208ENST00000528280 SOCS7O14512 581 aa15.7■□□□□ 0.1
CHD7-208ENST00000528280 ATP10BO94823 1461 aa15.7■□□□□ 0.1
CHD7-208ENST00000528280 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
CHD7-208ENST00000528280 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
CHD7-208ENST00000528280 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
CHD7-208ENST00000528280 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
CHD7-208ENST00000528280 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
CHD7-208ENST00000528280 ILDR2Q71H61 639 aa15.66■□□□□ 0.1
CHD7-208ENST00000528280 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
CHD7-208ENST00000528280 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
CHD7-208ENST00000528280 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
CHD7-208ENST00000528280 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
CHD7-208ENST00000528280 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
CHD7-208ENST00000528280 PTPRMP28827 1452 aa15.62■□□□□ 0.09
CHD7-208ENST00000528280 FMN1Q68DA7 1419 aa15.61■□□□□ 0.09
CHD7-208ENST00000528280 CFAP43Q8NDM7 1665 aa15.61■□□□□ 0.09
CHD7-208ENST00000528280 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
CHD7-208ENST00000528280 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
CHD7-208ENST00000528280 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
CHD7-208ENST00000528280 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
CHD7-208ENST00000528280 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
CHD7-208ENST00000528280 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
CHD7-208ENST00000528280 CERKQ8TCT0 537 aa15.54■□□□□ 0.08
CHD7-208ENST00000528280 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
CHD7-208ENST00000528280 ARAP3Q8WWN8 1544 aa15.52■□□□□ 0.07
CHD7-208ENST00000528280 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
CHD7-208ENST00000528280 NEO1Q92859 1461 aa15.5■□□□□ 0.07
CHD7-208ENST00000528280 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
CHD7-208ENST00000528280 HECW1Q76N89 1606 aa15.47■□□□□ 0.07
CHD7-208ENST00000528280 CLIP1P30622 1438 aa15.43■□□□□ 0.06
CHD7-208ENST00000528280 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
CHD7-208ENST00000528280 RAPGEF3O95398 923 aa15.43■□□□□ 0.06
CHD7-208ENST00000528280 HSPA2P54652 639 aa15.43■□□□□ 0.06
CHD7-208ENST00000528280 EFCAB2Q5VUJ9 269 aa15.43■□□□□ 0.06
CHD7-208ENST00000528280 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
CHD7-208ENST00000528280 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
CHD7-208ENST00000528280 SPATA31D1Q6ZQQ2 1576 aa15.42■□□□□ 0.06
CHD7-208ENST00000528280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD7-208ENST00000528280 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
CHD7-208ENST00000528280 PLCH2O75038 1416 aa15.41■□□□□ 0.06
CHD7-208ENST00000528280 FANCAO15360 1455 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms