RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
SOX6-210ENST00000528252 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
SOX6-210ENST00000528252 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
SOX6-210ENST00000528252 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
SOX6-210ENST00000528252 WDR62O43379 1518 aa12.44□□□□□ -0.42
SOX6-210ENST00000528252 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
SOX6-210ENST00000528252 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
SOX6-210ENST00000528252 FHOD3Q2V2M9 1422 aa12.41□□□□□ -0.42
SOX6-210ENST00000528252 ZNF608Q9ULD9 1512 aaPredicted RBP12.41□□□□□ -0.42
SOX6-210ENST00000528252 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
SOX6-210ENST00000528252 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
SOX6-210ENST00000528252 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
SOX6-210ENST00000528252 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
SOX6-210ENST00000528252 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
SOX6-210ENST00000528252 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
SOX6-210ENST00000528252 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
SOX6-210ENST00000528252 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
SOX6-210ENST00000528252 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
SOX6-210ENST00000528252 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
SOX6-210ENST00000528252 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
SOX6-210ENST00000528252 PCF11O94913 1555 aaKnown RBP12.33□□□□□ -0.44
SOX6-210ENST00000528252 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
SOX6-210ENST00000528252 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
SOX6-210ENST00000528252 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
SOX6-210ENST00000528252 CASKIN1Q8WXD9 1431 aa12.31□□□□□ -0.44
SOX6-210ENST00000528252 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
SOX6-210ENST00000528252 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
SOX6-210ENST00000528252 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
SOX6-210ENST00000528252 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
SOX6-210ENST00000528252 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
SOX6-210ENST00000528252 SAMD9Q5K651 1589 aa12.29□□□□□ -0.44
SOX6-210ENST00000528252 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
SOX6-210ENST00000528252 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
SOX6-210ENST00000528252 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
SOX6-210ENST00000528252 FBLN2P98095 1184 aa12.26□□□□□ -0.45
SOX6-210ENST00000528252 ITGAEP38570 1179 aa12.26□□□□□ -0.45
SOX6-210ENST00000528252 PHLDB1Q86UU1 1377 aa12.25□□□□□ -0.45
SOX6-210ENST00000528252 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
SOX6-210ENST00000528252 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
SOX6-210ENST00000528252 MAGI1Q96QZ7 1491 aaPredicted RBP12.23□□□□□ -0.45
SOX6-210ENST00000528252 KIAA0586Q9BVV6 1533 aa12.23□□□□□ -0.45
SOX6-210ENST00000528252 CFAP43Q8NDM7 1665 aa12.23□□□□□ -0.45
SOX6-210ENST00000528252 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
SOX6-210ENST00000528252 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
SOX6-210ENST00000528252 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.46
SOX6-210ENST00000528252 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
SOX6-210ENST00000528252 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
SOX6-210ENST00000528252 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
SOX6-210ENST00000528252 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
SOX6-210ENST00000528252 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
SOX6-210ENST00000528252 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
SOX6-210ENST00000528252 NUP160Q12769 1436 aa12.13□□□□□ -0.47
SOX6-210ENST00000528252 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
SOX6-210ENST00000528252 KIAA0556O60303 1618 aa12.13□□□□□ -0.47
SOX6-210ENST00000528252 CCDC18Q5T9S5 1454 aa12.13□□□□□ -0.47
SOX6-210ENST00000528252 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
SOX6-210ENST00000528252 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
SOX6-210ENST00000528252 PLPPR3Q6T4P5 718 aa12.12□□□□□ -0.47
SOX6-210ENST00000528252 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
SOX6-210ENST00000528252 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
SOX6-210ENST00000528252 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
SOX6-210ENST00000528252 CENPBP07199 599 aaPredicted RBP12.11□□□□□ -0.47
SOX6-210ENST00000528252 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
SOX6-210ENST00000528252 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
SOX6-210ENST00000528252 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
SOX6-210ENST00000528252 EHBP1L1Q8N3D4 1523 aa12.1□□□□□ -0.47
SOX6-210ENST00000528252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.09□□□□□ -0.47
SOX6-210ENST00000528252 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
SOX6-210ENST00000528252 CARMIL2Q6F5E8 1435 aa12.08□□□□□ -0.48
SOX6-210ENST00000528252 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
SOX6-210ENST00000528252 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
SOX6-210ENST00000528252 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
SOX6-210ENST00000528252 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
SOX6-210ENST00000528252 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
SOX6-210ENST00000528252 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
SOX6-210ENST00000528252 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
SOX6-210ENST00000528252 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
SOX6-210ENST00000528252 PTPRKQ15262 1439 aa12.02□□□□□ -0.48
SOX6-210ENST00000528252 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
SOX6-210ENST00000528252 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
SOX6-210ENST00000528252 PTPN23Q9H3S7 1636 aa11.99□□□□□ -0.49
SOX6-210ENST00000528252 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
SOX6-210ENST00000528252 PTPRGP23470 1445 aa11.97□□□□□ -0.49
SOX6-210ENST00000528252 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
SOX6-210ENST00000528252 CHD1O14646 1710 aa11.97□□□□□ -0.49
SOX6-210ENST00000528252 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
SOX6-210ENST00000528252 DIEXFQ68CQ4 756 aaKnown RBP11.96□□□□□ -0.49
SOX6-210ENST00000528252 TCOF1Q13428 1488 aaKnown RBP11.96□□□□□ -0.49
SOX6-210ENST00000528252 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
SOX6-210ENST00000528252 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
SOX6-210ENST00000528252 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
SOX6-210ENST00000528252 PLEKHD1A6NEE1 506 aa11.95□□□□□ -0.5
SOX6-210ENST00000528252 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
SOX6-210ENST00000528252 NAIPQ13075 1403 aa11.94□□□□□ -0.5
SOX6-210ENST00000528252 ABCA8O94911 1581 aa11.94□□□□□ -0.5
SOX6-210ENST00000528252 ATP10BO94823 1461 aa11.93□□□□□ -0.5
SOX6-210ENST00000528252 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
SOX6-210ENST00000528252 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
SOX6-210ENST00000528252 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
SOX6-210ENST00000528252 ZNF777Q9ULD5 760 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms