RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
TRAPPC4-209ENST00000528230 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
TRAPPC4-209ENST00000528230 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
TRAPPC4-209ENST00000528230 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
TRAPPC4-209ENST00000528230 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC4-209ENST00000528230 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
TRAPPC4-209ENST00000528230 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
TRAPPC4-209ENST00000528230 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC4-209ENST00000528230 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
TRAPPC4-209ENST00000528230 CARMIL2Q6F5E8 1435 aa20.38■□□□□ 0.85
TRAPPC4-209ENST00000528230 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
TRAPPC4-209ENST00000528230 EEA1Q15075 1411 aa20.36■□□□□ 0.85
TRAPPC4-209ENST00000528230 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
TRAPPC4-209ENST00000528230 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
TRAPPC4-209ENST00000528230 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
TRAPPC4-209ENST00000528230 PTPRGP23470 1445 aa20.31■□□□□ 0.84
TRAPPC4-209ENST00000528230 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
TRAPPC4-209ENST00000528230 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRAPPC4-209ENST00000528230 ADCY10Q96PN6 1610 aa20.27■□□□□ 0.84
TRAPPC4-209ENST00000528230 KIAA0556O60303 1618 aa20.23■□□□□ 0.83
TRAPPC4-209ENST00000528230 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
TRAPPC4-209ENST00000528230 MAPKBP1O60336 1514 aa20.21■□□□□ 0.83
TRAPPC4-209ENST00000528230 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC4-209ENST00000528230 UHRF1BP1LA0JNW5 1464 aa20.18■□□□□ 0.82
TRAPPC4-209ENST00000528230 UACAQ9BZF9 1416 aa20.18■□□□□ 0.82
TRAPPC4-209ENST00000528230 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC4-209ENST00000528230 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
TRAPPC4-209ENST00000528230 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
TRAPPC4-209ENST00000528230 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
TRAPPC4-209ENST00000528230 KIF21BO75037 1637 aa20.13■□□□□ 0.81
TRAPPC4-209ENST00000528230 FAM69CQ0P6D2 419 aa20.09■□□□□ 0.81
TRAPPC4-209ENST00000528230 KDM5BQ9UGL1 1544 aa20.08■□□□□ 0.81
TRAPPC4-209ENST00000528230 DIP2BQ9P265 1576 aa20.08■□□□□ 0.8
TRAPPC4-209ENST00000528230 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
TRAPPC4-209ENST00000528230 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
TRAPPC4-209ENST00000528230 ABCA8O94911 1581 aa20.04■□□□□ 0.8
TRAPPC4-209ENST00000528230 ASXL2Q76L83 1435 aa20.02■□□□□ 0.8
TRAPPC4-209ENST00000528230 ZCCHC11Q5TAX3 1644 aaKnown RBP20.02■□□□□ 0.79
TRAPPC4-209ENST00000528230 P3H3Q8IVL6 736 aa20■□□□□ 0.79
TRAPPC4-209ENST00000528230 GLI2P10070 1586 aa19.98■□□□□ 0.79
TRAPPC4-209ENST00000528230 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
TRAPPC4-209ENST00000528230 EFCAB5A4FU69 1503 aa19.94■□□□□ 0.78
TRAPPC4-209ENST00000528230 TSPOAP1O95153 1857 aa19.93■□□□□ 0.78
TRAPPC4-209ENST00000528230 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-209ENST00000528230 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC4-209ENST00000528230 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
TRAPPC4-209ENST00000528230 RAPGEF6Q8TEU7 1601 aa19.9■□□□□ 0.78
TRAPPC4-209ENST00000528230 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
TRAPPC4-209ENST00000528230 ATP10BO94823 1461 aa19.87■□□□□ 0.77
TRAPPC4-209ENST00000528230 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
TRAPPC4-209ENST00000528230 MAP3K4Q9Y6R4 1608 aa19.86■□□□□ 0.77
TRAPPC4-209ENST00000528230 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
TRAPPC4-209ENST00000528230 KDM6BO15054 1643 aa19.8■□□□□ 0.76
TRAPPC4-209ENST00000528230 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
TRAPPC4-209ENST00000528230 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
TRAPPC4-209ENST00000528230 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
TRAPPC4-209ENST00000528230 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
TRAPPC4-209ENST00000528230 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
TRAPPC4-209ENST00000528230 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
TRAPPC4-209ENST00000528230 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
TRAPPC4-209ENST00000528230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC4-209ENST00000528230 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
TRAPPC4-209ENST00000528230 CD109Q6YHK3 1445 aa19.76■□□□□ 0.75
TRAPPC4-209ENST00000528230 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
TRAPPC4-209ENST00000528230 PLEKHD1A6NEE1 506 aa19.71■□□□□ 0.75
TRAPPC4-209ENST00000528230 ABCA9Q8IUA7 1624 aa19.7■□□□□ 0.74
TRAPPC4-209ENST00000528230 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
TRAPPC4-209ENST00000528230 COL17A1Q9UMD9 1497 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC4-209ENST00000528230 PHLDB1Q86UU1 1377 aa19.63■□□□□ 0.73
TRAPPC4-209ENST00000528230 ATP1B4Q9UN42 357 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC4-209ENST00000528230 CDK13Q14004 1512 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-209ENST00000528230 CLIP1P30622 1438 aa19.61■□□□□ 0.73
TRAPPC4-209ENST00000528230 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC4-209ENST00000528230 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
TRAPPC4-209ENST00000528230 CASKIN1Q8WXD9 1431 aa19.58■□□□□ 0.72
TRAPPC4-209ENST00000528230 NEO1Q92859 1461 aa19.57■□□□□ 0.72
TRAPPC4-209ENST00000528230 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
TRAPPC4-209ENST00000528230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAPPC4-209ENST00000528230 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC4-209ENST00000528230 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
TRAPPC4-209ENST00000528230 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
TRAPPC4-209ENST00000528230 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
TRAPPC4-209ENST00000528230 TTC37Q6PGP7 1564 aa19.51■□□□□ 0.71
TRAPPC4-209ENST00000528230 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC4-209ENST00000528230 CFAP74Q9C0B2 1584 aa19.49■□□□□ 0.71
TRAPPC4-209ENST00000528230 PLCH2O75038 1416 aa19.47■□□□□ 0.71
TRAPPC4-209ENST00000528230 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
TRAPPC4-209ENST00000528230 FANCAO15360 1455 aa19.47■□□□□ 0.71
TRAPPC4-209ENST00000528230 KIF14Q15058 1648 aa19.47■□□□□ 0.71
TRAPPC4-209ENST00000528230 AKNAQ7Z591 1439 aa19.46■□□□□ 0.71
TRAPPC4-209ENST00000528230 LOC105371045A0A1W2PR82 267 aa19.45■□□□□ 0.7
TRAPPC4-209ENST00000528230 MYO5CQ9NQX4 1742 aa19.45■□□□□ 0.7
TRAPPC4-209ENST00000528230 KDM4FA0A1W2PPD8 638 aa19.43■□□□□ 0.7
TRAPPC4-209ENST00000528230 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
TRAPPC4-209ENST00000528230 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC4-209ENST00000528230 EFCAB2Q5VUJ9 269 aa19.41■□□□□ 0.7
TRAPPC4-209ENST00000528230 FRMPD1Q5SYB0 1578 aa19.39■□□□□ 0.69
TRAPPC4-209ENST00000528230 RICTORQ6R327 1708 aa19.39■□□□□ 0.69
TRAPPC4-209ENST00000528230 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
TRAPPC4-209ENST00000528230 CDC42BPBQ9Y5S2 1711 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms