RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
SDHD-205ENST00000528048 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
SDHD-205ENST00000528048 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
SDHD-205ENST00000528048 NUP160Q12769 1436 aa20.37■□□□□ 0.85
SDHD-205ENST00000528048 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
SDHD-205ENST00000528048 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
SDHD-205ENST00000528048 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
SDHD-205ENST00000528048 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
SDHD-205ENST00000528048 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
SDHD-205ENST00000528048 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
SDHD-205ENST00000528048 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
SDHD-205ENST00000528048 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
SDHD-205ENST00000528048 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
SDHD-205ENST00000528048 CUL7Q14999 1698 aa20.22■□□□□ 0.83
SDHD-205ENST00000528048 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
SDHD-205ENST00000528048 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
SDHD-205ENST00000528048 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
SDHD-205ENST00000528048 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
SDHD-205ENST00000528048 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
SDHD-205ENST00000528048 EEA1Q15075 1411 aa20.1■□□□□ 0.81
SDHD-205ENST00000528048 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
SDHD-205ENST00000528048 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
SDHD-205ENST00000528048 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
SDHD-205ENST00000528048 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDHD-205ENST00000528048 SHROOM2Q13796 1616 aa20.08■□□□□ 0.8
SDHD-205ENST00000528048 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
SDHD-205ENST00000528048 PTPRGP23470 1445 aa20.03■□□□□ 0.8
SDHD-205ENST00000528048 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
SDHD-205ENST00000528048 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
SDHD-205ENST00000528048 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
SDHD-205ENST00000528048 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
SDHD-205ENST00000528048 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
SDHD-205ENST00000528048 UGGT2Q9NYU1 1516 aa19.9■□□□□ 0.78
SDHD-205ENST00000528048 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
SDHD-205ENST00000528048 DISP1Q96F81 1524 aa19.88■□□□□ 0.77
SDHD-205ENST00000528048 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
SDHD-205ENST00000528048 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
SDHD-205ENST00000528048 PPP4R3CPQ6ZMV5 832 aa19.83■□□□□ 0.77
SDHD-205ENST00000528048 FAM69CQ0P6D2 419 aa19.82■□□□□ 0.76
SDHD-205ENST00000528048 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
SDHD-205ENST00000528048 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
SDHD-205ENST00000528048 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
SDHD-205ENST00000528048 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
SDHD-205ENST00000528048 KIF21BO75037 1637 aa19.72■□□□□ 0.75
SDHD-205ENST00000528048 CTTNBP2Q8WZ74 1663 aa19.71■□□□□ 0.75
SDHD-205ENST00000528048 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
SDHD-205ENST00000528048 PLB1Q6P1J6 1458 aa19.68■□□□□ 0.74
SDHD-205ENST00000528048 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
SDHD-205ENST00000528048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
SDHD-205ENST00000528048 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
SDHD-205ENST00000528048 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
SDHD-205ENST00000528048 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
SDHD-205ENST00000528048 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
SDHD-205ENST00000528048 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.73
SDHD-205ENST00000528048 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
SDHD-205ENST00000528048 FHOD3Q2V2M9 1422 aa19.62■□□□□ 0.73
SDHD-205ENST00000528048 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
SDHD-205ENST00000528048 ABCA8O94911 1581 aa19.57■□□□□ 0.72
SDHD-205ENST00000528048 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
SDHD-205ENST00000528048 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
SDHD-205ENST00000528048 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
SDHD-205ENST00000528048 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
SDHD-205ENST00000528048 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
SDHD-205ENST00000528048 ATP10BO94823 1461 aa19.53■□□□□ 0.72
SDHD-205ENST00000528048 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
SDHD-205ENST00000528048 WDR7Q9Y4E6 1490 aa19.52■□□□□ 0.72
SDHD-205ENST00000528048 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
SDHD-205ENST00000528048 EPRSP07814 1512 aaKnown RBP19.51■□□□□ 0.71
SDHD-205ENST00000528048 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
SDHD-205ENST00000528048 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
SDHD-205ENST00000528048 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
SDHD-205ENST00000528048 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
SDHD-205ENST00000528048 GLI2P10070 1586 aa19.45■□□□□ 0.7
SDHD-205ENST00000528048 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
SDHD-205ENST00000528048 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
SDHD-205ENST00000528048 CLIP1P30622 1438 aa19.43■□□□□ 0.7
SDHD-205ENST00000528048 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
SDHD-205ENST00000528048 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
SDHD-205ENST00000528048 KIF13AQ9H1H9 1805 aa19.39■□□□□ 0.7
SDHD-205ENST00000528048 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
SDHD-205ENST00000528048 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
SDHD-205ENST00000528048 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
SDHD-205ENST00000528048 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
SDHD-205ENST00000528048 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
SDHD-205ENST00000528048 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
SDHD-205ENST00000528048 KDM6BO15054 1643 aa19.28■□□□□ 0.68
SDHD-205ENST00000528048 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
SDHD-205ENST00000528048 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
SDHD-205ENST00000528048 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
SDHD-205ENST00000528048 MAP3K4Q9Y6R4 1608 aa19.26■□□□□ 0.67
SDHD-205ENST00000528048 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
SDHD-205ENST00000528048 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
SDHD-205ENST00000528048 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
SDHD-205ENST00000528048 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
SDHD-205ENST00000528048 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
SDHD-205ENST00000528048 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
SDHD-205ENST00000528048 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
SDHD-205ENST00000528048 NEO1Q92859 1461 aa19.18■□□□□ 0.66
SDHD-205ENST00000528048 RAPGEF3O95398 923 aa19.18■□□□□ 0.66
SDHD-205ENST00000528048 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms