RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 ERCC6L2Q5T890 1561 aa39.73■■■■□ 3.95
PKP3-206ENST00000528036 CARMIL1Q5VZK9 1371 aa39.69■■■■□ 3.94
PKP3-206ENST00000528036 RUSC2Q8N2Y8 1516 aa39.67■■■■□ 3.94
PKP3-206ENST00000528036 KIAA0586Q9BVV6 1533 aa39.67■■■■□ 3.94
PKP3-206ENST00000528036 NPM1P06748 294 aaKnown RBP eCLIP39.37■■■■□ 3.89
PKP3-206ENST00000528036 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
PKP3-206ENST00000528036 CARMIL2Q6F5E8 1435 aa39.34■■■■□ 3.89
PKP3-206ENST00000528036 IQGAP2Q13576 1575 aa39.26■■■■□ 3.88
PKP3-206ENST00000528036 PTPRGP23470 1445 aa39.23■■■■□ 3.87
PKP3-206ENST00000528036 TNIKQ9UKE5 1360 aa39.22■■■■□ 3.87
PKP3-206ENST00000528036 MAPKBP1O60336 1514 aa39.12■■■■□ 3.85
PKP3-206ENST00000528036 ADCY10Q96PN6 1610 aa39.1■■■■□ 3.85
PKP3-206ENST00000528036 UGGT2Q9NYU1 1516 aa39.08■■■■□ 3.85
PKP3-206ENST00000528036 PRXQ9BXM0 1461 aa39.05■■■■□ 3.84
PKP3-206ENST00000528036 ABCC10Q5T3U5 1492 aa39.04■■■■□ 3.84
PKP3-206ENST00000528036 DISP1Q96F81 1524 aa39.02■■■■□ 3.84
PKP3-206ENST00000528036 FAM69CQ0P6D2 419 aa39■■■■□ 3.83
PKP3-206ENST00000528036 TTBK1Q5TCY1 1321 aaPredicted RBP38.97■■■■□ 3.83
PKP3-206ENST00000528036 UHRF1BP1LA0JNW5 1464 aa38.96■■■■□ 3.83
PKP3-206ENST00000528036 UACAQ9BZF9 1416 aa38.94■■■■□ 3.82
PKP3-206ENST00000528036 ABCC2Q92887 1545 aa38.94■■■■□ 3.82
PKP3-206ENST00000528036 EEA1Q15075 1411 aa38.92■■■■□ 3.82
PKP3-206ENST00000528036 CSRNP3Q8WYN3 585 aa38.92■■■■□ 3.82
PKP3-206ENST00000528036 GOLGA3Q08378 1498 aa38.91■■■■□ 3.82
PKP3-206ENST00000528036 KIF13AQ9H1H9 1805 aa38.91■■■■□ 3.82
PKP3-206ENST00000528036 KIAA0556O60303 1618 aa38.86■■■■□ 3.81
PKP3-206ENST00000528036 CTTNBP2Q8WZ74 1663 aa38.85■■■■□ 3.81
PKP3-206ENST00000528036 DIP2BQ9P265 1576 aa38.84■■■■□ 3.81
PKP3-206ENST00000528036 PLB1Q6P1J6 1458 aa38.81■■■■□ 3.8
PKP3-206ENST00000528036 FAM9AQ8IZU1 332 aaPredicted RBP38.8■■■■□ 3.8
PKP3-206ENST00000528036 KDM5BQ9UGL1 1544 aa38.73■■■■□ 3.79
PKP3-206ENST00000528036 ASXL2Q76L83 1435 aa38.73■■■■□ 3.79
PKP3-206ENST00000528036 GLI2P10070 1586 aa38.61■■■■□ 3.77
PKP3-206ENST00000528036 ZCCHC11Q5TAX3 1644 aaKnown RBP38.52■■■■□ 3.76
PKP3-206ENST00000528036 ABCA8O94911 1581 aa38.51■■■■□ 3.76
PKP3-206ENST00000528036 EPRSP07814 1512 aaKnown RBP38.49■■■■□ 3.75
PKP3-206ENST00000528036 CHIC1Q5VXU3 224 aa38.48■■■■□ 3.75
PKP3-206ENST00000528036 WDR7Q9Y4E6 1490 aa38.44■■■■□ 3.74
PKP3-206ENST00000528036 AEBP2Q6ZN18 517 aaPredicted RBP38.44■■■■□ 3.74
PKP3-206ENST00000528036 KDM6BO15054 1643 aa38.41■■■■□ 3.74
PKP3-206ENST00000528036 P3H3Q8IVL6 736 aa38.41■■■■□ 3.74
PKP3-206ENST00000528036 TSPOAP1O95153 1857 aa38.41■■■■□ 3.74
PKP3-206ENST00000528036 SAMD9Q5K651 1589 aa38.39■■■■□ 3.74
PKP3-206ENST00000528036 KIF21BO75037 1637 aa38.38■■■■□ 3.73
PKP3-206ENST00000528036 TEX14Q8IWB6 1497 aa38.36■■■■□ 3.73
PKP3-206ENST00000528036 MAP3K4Q9Y6R4 1608 aa38.3■■■■□ 3.72
PKP3-206ENST00000528036 PPRC1Q5VV67 1664 aaKnown RBP38.24■■■■□ 3.71
PKP3-206ENST00000528036 KCNH8Q96L42 1107 aa38.23■■■■□ 3.71
PKP3-206ENST00000528036 ATP10BO94823 1461 aa38.22■■■■□ 3.71
PKP3-206ENST00000528036 EFCAB5A4FU69 1503 aa38.21■■■■□ 3.71
PKP3-206ENST00000528036 CD109Q6YHK3 1445 aa38.2■■■■□ 3.71
PKP3-206ENST00000528036 RANGAP1P46060 587 aaPredicted RBP38.19■■■■□ 3.7
PKP3-206ENST00000528036 UBTFP17480 764 aaKnown RBP38.17■■■■□ 3.7
PKP3-206ENST00000528036 MAGI3Q5TCQ9 1506 aa38.17■■■■□ 3.7
PKP3-206ENST00000528036 RAPGEF6Q8TEU7 1601 aa38.16■■■■□ 3.7
PKP3-206ENST00000528036 FHOD3Q2V2M9 1422 aa38.13■■■■□ 3.7
PKP3-206ENST00000528036 CFAP43Q8NDM7 1665 aa38.13■■■■□ 3.69
PKP3-206ENST00000528036 ARID3CA6NKF2 412 aa38.1■■■■□ 3.69
PKP3-206ENST00000528036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.09■■■■□ 3.69
PKP3-206ENST00000528036 HNRNPUL2Q1KMD3 747 aaKnown RBP38.09■■■■□ 3.69
PKP3-206ENST00000528036 NUP153P49790 1475 aaKnown RBP38.03■■■■□ 3.68
PKP3-206ENST00000528036 COL17A1Q9UMD9 1497 aaPredicted RBP38.03■■■■□ 3.68
PKP3-206ENST00000528036 PHLDB1Q86UU1 1377 aa38■■■■□ 3.67
PKP3-206ENST00000528036 PLEKHD1A6NEE1 506 aa37.98■■■■□ 3.67
PKP3-206ENST00000528036 FMN1Q68DA7 1419 aa37.93■■■■□ 3.66
PKP3-206ENST00000528036 EHMT2Q96KQ7 1210 aa37.92■■■■□ 3.66
PKP3-206ENST00000528036 ABCA9Q8IUA7 1624 aa37.91■■■■□ 3.66
PKP3-206ENST00000528036 KDM4FA0A1W2PPD8 638 aa37.86■■■■□ 3.65
PKP3-206ENST00000528036 ARAP3Q8WWN8 1544 aa37.85■■■■□ 3.65
PKP3-206ENST00000528036 ARHGAP35Q9NRY4 1499 aa37.83■■■■□ 3.65
PKP3-206ENST00000528036 NEO1Q92859 1461 aa37.8■■■■□ 3.64
PKP3-206ENST00000528036 CDK11AQ9UQ88 783 aaPredicted RBP37.76■■■■□ 3.64
PKP3-206ENST00000528036 ATP1B4Q9UN42 357 aaPredicted RBP37.7■■■■□ 3.63
PKP3-206ENST00000528036 HECW1Q76N89 1606 aa37.69■■■■□ 3.62
PKP3-206ENST00000528036 ADGRL1O94910 1474 aa37.65■■■■□ 3.62
PKP3-206ENST00000528036 CDK13Q14004 1512 aaKnown RBP37.63■■■■□ 3.61
PKP3-206ENST00000528036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.6■■■■□ 3.613e-8■□□□□ 9.7
PKP3-206ENST00000528036 CFAP74Q9C0B2 1584 aa37.55■■■■□ 3.6
PKP3-206ENST00000528036 RAPGEF3O95398 923 aa37.55■■■■□ 3.6
PKP3-206ENST00000528036 FANCAO15360 1455 aa37.55■■■■□ 3.6
PKP3-206ENST00000528036 AKNAQ7Z591 1439 aa37.54■■■■□ 3.6
PKP3-206ENST00000528036 DENND4BO75064 1496 aaPredicted RBP37.51■■■■□ 3.59
PKP3-206ENST00000528036 CLIP1P30622 1438 aa37.5■■■■□ 3.59
PKP3-206ENST00000528036 CASKIN1Q8WXD9 1431 aa37.5■■■■□ 3.59
PKP3-206ENST00000528036 PLCH2O75038 1416 aa37.49■■■■□ 3.59
PKP3-206ENST00000528036 TROQ12816 1431 aaPredicted RBP37.48■■■■□ 3.59
PKP3-206ENST00000528036 TTC37Q6PGP7 1564 aa37.46■■■■□ 3.59
PKP3-206ENST00000528036 CCDC18Q5T9S5 1454 aa37.45■■■■□ 3.59
PKP3-206ENST00000528036 EFCAB2Q5VUJ9 269 aa37.43■■■■□ 3.58
PKP3-206ENST00000528036 KIF14Q15058 1648 aa37.37■■■■□ 3.57
PKP3-206ENST00000528036 FYCO1Q9BQS8 1478 aa37.36■■■■□ 3.57
PKP3-206ENST00000528036 FRMPD1Q5SYB0 1578 aa37.36■■■■□ 3.57
PKP3-206ENST00000528036 MAGI2Q86UL8 1455 aa37.33■■■■□ 3.57
PKP3-206ENST00000528036 PCF11O94913 1555 aaKnown RBP37.31■■■■□ 3.56
PKP3-206ENST00000528036 SCAPERQ9BY12 1400 aa37.3■■■■□ 3.56
PKP3-206ENST00000528036 RICTORQ6R327 1708 aa37.28■■■■□ 3.56
PKP3-206ENST00000528036 ZMYM4Q5VZL5 1548 aa37.27■■■■□ 3.56
PKP3-206ENST00000528036 MYO5CQ9NQX4 1742 aa37.27■■■■□ 3.56
PKP3-206ENST00000528036 ARID4BQ4LE39 1312 aaPredicted RBP37.25■■■■□ 3.55
PKP3-206ENST00000528036 POGZQ7Z3K3 1410 aa37.24■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms