RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ABCC10Q5T3U5 1492 aa19.31■□□□□ 0.68
NR1H3-230ENST00000527949 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
NR1H3-230ENST00000527949 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
NR1H3-230ENST00000527949 MAPKBP1O60336 1514 aa19.29■□□□□ 0.68
NR1H3-230ENST00000527949 IGF1RP08069 1367 aa19.27■□□□□ 0.68
NR1H3-230ENST00000527949 KIF13AQ9H1H9 1805 aa19.27■□□□□ 0.68
NR1H3-230ENST00000527949 CUL7Q14999 1698 aa19.26■□□□□ 0.67
NR1H3-230ENST00000527949 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
NR1H3-230ENST00000527949 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
NR1H3-230ENST00000527949 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
NR1H3-230ENST00000527949 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.66
NR1H3-230ENST00000527949 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
NR1H3-230ENST00000527949 KDM6BO15054 1643 aa19.13■□□□□ 0.65
NR1H3-230ENST00000527949 PTPRGP23470 1445 aa19.08■□□□□ 0.65
NR1H3-230ENST00000527949 KDM4FA0A1W2PPD8 638 aa19.07■□□□□ 0.64
NR1H3-230ENST00000527949 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
NR1H3-230ENST00000527949 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
NR1H3-230ENST00000527949 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
NR1H3-230ENST00000527949 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
NR1H3-230ENST00000527949 RAPGEF2Q9Y4G8 1499 aa19■□□□□ 0.63
NR1H3-230ENST00000527949 GLI2P10070 1586 aa18.97■□□□□ 0.63
NR1H3-230ENST00000527949 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
NR1H3-230ENST00000527949 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
NR1H3-230ENST00000527949 ASXL2Q76L83 1435 aa18.96■□□□□ 0.63
NR1H3-230ENST00000527949 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
NR1H3-230ENST00000527949 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
NR1H3-230ENST00000527949 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-230ENST00000527949 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
NR1H3-230ENST00000527949 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
NR1H3-230ENST00000527949 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
NR1H3-230ENST00000527949 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
NR1H3-230ENST00000527949 KDM5BQ9UGL1 1544 aa18.85■□□□□ 0.61
NR1H3-230ENST00000527949 ADGRL1O94910 1474 aa18.85■□□□□ 0.61
NR1H3-230ENST00000527949 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
NR1H3-230ENST00000527949 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
NR1H3-230ENST00000527949 EEA1Q15075 1411 aa18.83■□□□□ 0.6
NR1H3-230ENST00000527949 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
NR1H3-230ENST00000527949 PPRC1Q5VV67 1664 aaKnown RBP18.81■□□□□ 0.6
NR1H3-230ENST00000527949 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
NR1H3-230ENST00000527949 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
NR1H3-230ENST00000527949 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
NR1H3-230ENST00000527949 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.59
NR1H3-230ENST00000527949 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
NR1H3-230ENST00000527949 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
NR1H3-230ENST00000527949 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
NR1H3-230ENST00000527949 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
NR1H3-230ENST00000527949 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
NR1H3-230ENST00000527949 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
NR1H3-230ENST00000527949 CD109Q6YHK3 1445 aa18.67■□□□□ 0.58
NR1H3-230ENST00000527949 ABCA8O94911 1581 aa18.63■□□□□ 0.57
NR1H3-230ENST00000527949 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
NR1H3-230ENST00000527949 KIF21BO75037 1637 aa18.6■□□□□ 0.57
NR1H3-230ENST00000527949 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
NR1H3-230ENST00000527949 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
NR1H3-230ENST00000527949 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
NR1H3-230ENST00000527949 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
NR1H3-230ENST00000527949 ARAP3Q8WWN8 1544 aa18.55■□□□□ 0.56
NR1H3-230ENST00000527949 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
NR1H3-230ENST00000527949 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
NR1H3-230ENST00000527949 ATP10BO94823 1461 aa18.45■□□□□ 0.54
NR1H3-230ENST00000527949 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
NR1H3-230ENST00000527949 NEO1Q92859 1461 aa18.44■□□□□ 0.54
NR1H3-230ENST00000527949 PTPRMP28827 1452 aa18.42■□□□□ 0.54
NR1H3-230ENST00000527949 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
NR1H3-230ENST00000527949 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
NR1H3-230ENST00000527949 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
NR1H3-230ENST00000527949 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
NR1H3-230ENST00000527949 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
NR1H3-230ENST00000527949 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
NR1H3-230ENST00000527949 ARID3CA6NKF2 412 aa18.36■□□□□ 0.53
NR1H3-230ENST00000527949 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
NR1H3-230ENST00000527949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
NR1H3-230ENST00000527949 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
NR1H3-230ENST00000527949 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
NR1H3-230ENST00000527949 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
NR1H3-230ENST00000527949 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
NR1H3-230ENST00000527949 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
NR1H3-230ENST00000527949 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
NR1H3-230ENST00000527949 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
NR1H3-230ENST00000527949 BCORL1Q5H9F3 1711 aa18.28■□□□□ 0.52
NR1H3-230ENST00000527949 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-230ENST00000527949 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
NR1H3-230ENST00000527949 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
NR1H3-230ENST00000527949 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
NR1H3-230ENST00000527949 AKNAQ7Z591 1439 aa18.24■□□□□ 0.51
NR1H3-230ENST00000527949 ARHGEF40Q8TER5 1519 aa18.24■□□□□ 0.51
NR1H3-230ENST00000527949 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
NR1H3-230ENST00000527949 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
NR1H3-230ENST00000527949 FANCAO15360 1455 aa18.23■□□□□ 0.51
NR1H3-230ENST00000527949 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
NR1H3-230ENST00000527949 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
NR1H3-230ENST00000527949 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
NR1H3-230ENST00000527949 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
NR1H3-230ENST00000527949 RICTORQ6R327 1708 aa18.15■□□□□ 0.5
NR1H3-230ENST00000527949 ZFYVE16Q7Z3T8 1539 aa18.15■□□□□ 0.5
NR1H3-230ENST00000527949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.5
NR1H3-230ENST00000527949 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
NR1H3-230ENST00000527949 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
NR1H3-230ENST00000527949 EHMT2Q96KQ7 1210 aa18.13■□□□□ 0.49
NR1H3-230ENST00000527949 HSPA2P54652 639 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms