RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CUL7Q14999 1698 aa24.46■■□□□ 1.51
CAPN1-212ENST00000527887 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.5
CAPN1-212ENST00000527887 CARMIL1Q5VZK9 1371 aa24.43■■□□□ 1.5
CAPN1-212ENST00000527887 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
CAPN1-212ENST00000527887 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
CAPN1-212ENST00000527887 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
CAPN1-212ENST00000527887 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
CAPN1-212ENST00000527887 PTPRGP23470 1445 aa24.19■■□□□ 1.46
CAPN1-212ENST00000527887 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
CAPN1-212ENST00000527887 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
CAPN1-212ENST00000527887 MAPKBP1O60336 1514 aa24.14■■□□□ 1.45
CAPN1-212ENST00000527887 ADCY10Q96PN6 1610 aa24.11■■□□□ 1.45
CAPN1-212ENST00000527887 ABCC10Q5T3U5 1492 aa24.11■■□□□ 1.45
CAPN1-212ENST00000527887 FAM69CQ0P6D2 419 aa24.1■■□□□ 1.45
CAPN1-212ENST00000527887 UGGT2Q9NYU1 1516 aa24.05■■□□□ 1.44
CAPN1-212ENST00000527887 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
CAPN1-212ENST00000527887 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
CAPN1-212ENST00000527887 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
CAPN1-212ENST00000527887 PRXQ9BXM0 1461 aa24.01■■□□□ 1.43
CAPN1-212ENST00000527887 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
CAPN1-212ENST00000527887 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
CAPN1-212ENST00000527887 ABCC2Q92887 1545 aa24■■□□□ 1.43
CAPN1-212ENST00000527887 DIP2BQ9P265 1576 aa23.97■■□□□ 1.43
CAPN1-212ENST00000527887 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
CAPN1-212ENST00000527887 PLB1Q6P1J6 1458 aa23.94■■□□□ 1.42
CAPN1-212ENST00000527887 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
CAPN1-212ENST00000527887 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
CAPN1-212ENST00000527887 ASXL2Q76L83 1435 aa23.89■■□□□ 1.41
CAPN1-212ENST00000527887 EEA1Q15075 1411 aa23.88■■□□□ 1.41
CAPN1-212ENST00000527887 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
CAPN1-212ENST00000527887 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-212ENST00000527887 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
CAPN1-212ENST00000527887 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-212ENST00000527887 GLI2P10070 1586 aa23.82■■□□□ 1.4
CAPN1-212ENST00000527887 EPRSP07814 1512 aaKnown RBP23.75■■□□□ 1.39
CAPN1-212ENST00000527887 KDM6BO15054 1643 aa23.72■■□□□ 1.39
CAPN1-212ENST00000527887 ZCCHC11Q5TAX3 1644 aaKnown RBP23.72■■□□□ 1.39
CAPN1-212ENST00000527887 ABCA8O94911 1581 aa23.71■■□□□ 1.39
CAPN1-212ENST00000527887 WDR7Q9Y4E6 1490 aa23.69■■□□□ 1.38
CAPN1-212ENST00000527887 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
CAPN1-212ENST00000527887 TEX14Q8IWB6 1497 aa23.66■■□□□ 1.38
CAPN1-212ENST00000527887 P3H3Q8IVL6 736 aa23.65■■□□□ 1.38
CAPN1-212ENST00000527887 MAP3K4Q9Y6R4 1608 aa23.61■■□□□ 1.37
CAPN1-212ENST00000527887 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
CAPN1-212ENST00000527887 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
CAPN1-212ENST00000527887 KCNH8Q96L42 1107 aa23.59■■□□□ 1.37
CAPN1-212ENST00000527887 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
CAPN1-212ENST00000527887 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
CAPN1-212ENST00000527887 ATP10BO94823 1461 aa23.56■■□□□ 1.36
CAPN1-212ENST00000527887 MAGI3Q5TCQ9 1506 aa23.54■■□□□ 1.36
CAPN1-212ENST00000527887 KIF21BO75037 1637 aa23.54■■□□□ 1.36
CAPN1-212ENST00000527887 COL17A1Q9UMD9 1497 aaPredicted RBP23.51■■□□□ 1.35
CAPN1-212ENST00000527887 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
CAPN1-212ENST00000527887 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-212ENST00000527887 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
CAPN1-212ENST00000527887 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
CAPN1-212ENST00000527887 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
CAPN1-212ENST00000527887 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
CAPN1-212ENST00000527887 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
CAPN1-212ENST00000527887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-212ENST00000527887 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
CAPN1-212ENST00000527887 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
CAPN1-212ENST00000527887 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
CAPN1-212ENST00000527887 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
CAPN1-212ENST00000527887 PLEKHD1A6NEE1 506 aa23.4■■□□□ 1.34
CAPN1-212ENST00000527887 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
CAPN1-212ENST00000527887 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
CAPN1-212ENST00000527887 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
CAPN1-212ENST00000527887 NEO1Q92859 1461 aa23.3■■□□□ 1.32
CAPN1-212ENST00000527887 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
CAPN1-212ENST00000527887 ADGRL1O94910 1474 aa23.28■■□□□ 1.32
CAPN1-212ENST00000527887 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
CAPN1-212ENST00000527887 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-212ENST00000527887 RAPGEF3O95398 923 aa23.19■■□□□ 1.3
CAPN1-212ENST00000527887 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-212ENST00000527887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.3
CAPN1-212ENST00000527887 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
CAPN1-212ENST00000527887 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
CAPN1-212ENST00000527887 AKNAQ7Z591 1439 aa23.14■■□□□ 1.29
CAPN1-212ENST00000527887 FANCAO15360 1455 aa23.13■■□□□ 1.29
CAPN1-212ENST00000527887 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
CAPN1-212ENST00000527887 CFAP74Q9C0B2 1584 aa23.1■■□□□ 1.29
CAPN1-212ENST00000527887 PLCH2O75038 1416 aa23.1■■□□□ 1.29
CAPN1-212ENST00000527887 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
CAPN1-212ENST00000527887 TROQ12816 1431 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-212ENST00000527887 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
CAPN1-212ENST00000527887 CLIP1P30622 1438 aa23.05■■□□□ 1.28
CAPN1-212ENST00000527887 CASKIN1Q8WXD9 1431 aa23.05■■□□□ 1.28
CAPN1-212ENST00000527887 FRMPD1Q5SYB0 1578 aa23.03■■□□□ 1.28
CAPN1-212ENST00000527887 MAGI2Q86UL8 1455 aa23.01■■□□□ 1.27
CAPN1-212ENST00000527887 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
CAPN1-212ENST00000527887 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-212ENST00000527887 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
CAPN1-212ENST00000527887 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
CAPN1-212ENST00000527887 KIF14Q15058 1648 aa22.97■■□□□ 1.27
CAPN1-212ENST00000527887 RICTORQ6R327 1708 aa22.96■■□□□ 1.27
CAPN1-212ENST00000527887 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.26
CAPN1-212ENST00000527887 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
CAPN1-212ENST00000527887 POGZQ7Z3K3 1410 aa22.94■■□□□ 1.26
CAPN1-212ENST00000527887 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms