RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 RUSC2Q8N2Y8 1516 aa33.1■■■□□ 2.89
CAPN1-211ENST00000527739 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
CAPN1-211ENST00000527739 AEBP2Q6ZN18 517 aaPredicted RBP33■■■□□ 2.87
CAPN1-211ENST00000527739 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
CAPN1-211ENST00000527739 CUL7Q14999 1698 aa32.9■■■□□ 2.86
CAPN1-211ENST00000527739 KIAA0586Q9BVV6 1533 aa32.88■■■□□ 2.85
CAPN1-211ENST00000527739 ADCY10Q96PN6 1610 aa32.85■■■□□ 2.85
CAPN1-211ENST00000527739 FAM69CQ0P6D2 419 aa32.81■■■□□ 2.84
CAPN1-211ENST00000527739 ABCC10Q5T3U5 1492 aa32.8■■■□□ 2.84
CAPN1-211ENST00000527739 NPM1P06748 294 aaKnown RBP eCLIP32.79■■■□□ 2.84
CAPN1-211ENST00000527739 MAPKBP1O60336 1514 aa32.78■■■□□ 2.84
CAPN1-211ENST00000527739 DIP2BQ9P265 1576 aa32.74■■■□□ 2.83
CAPN1-211ENST00000527739 TTBK1Q5TCY1 1321 aaPredicted RBP32.72■■■□□ 2.83
CAPN1-211ENST00000527739 RAPGEF2Q9Y4G8 1499 aa32.65■■■□□ 2.82
CAPN1-211ENST00000527739 PTPRGP23470 1445 aa32.61■■■□□ 2.81
CAPN1-211ENST00000527739 CARMIL2Q6F5E8 1435 aa32.58■■■□□ 2.81
CAPN1-211ENST00000527739 IQGAP2Q13576 1575 aa32.54■■■□□ 2.8
CAPN1-211ENST00000527739 TNIKQ9UKE5 1360 aa32.54■■■□□ 2.8
CAPN1-211ENST00000527739 TSPOAP1O95153 1857 aa32.52■■■□□ 2.8
CAPN1-211ENST00000527739 KDM6BO15054 1643 aa32.48■■■□□ 2.79
CAPN1-211ENST00000527739 ABCC2Q92887 1545 aa32.47■■■□□ 2.79
CAPN1-211ENST00000527739 DISP1Q96F81 1524 aa32.45■■■□□ 2.78
CAPN1-211ENST00000527739 ASXL2Q76L83 1435 aa32.4■■■□□ 2.78
CAPN1-211ENST00000527739 UHRF1BP1LA0JNW5 1464 aa32.38■■■□□ 2.77
CAPN1-211ENST00000527739 CSRNP3Q8WYN3 585 aa32.38■■■□□ 2.77
CAPN1-211ENST00000527739 PRXQ9BXM0 1461 aa32.36■■■□□ 2.77
CAPN1-211ENST00000527739 UACAQ9BZF9 1416 aa32.36■■■□□ 2.77
CAPN1-211ENST00000527739 PLB1Q6P1J6 1458 aa32.34■■■□□ 2.77
CAPN1-211ENST00000527739 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
CAPN1-211ENST00000527739 PPRC1Q5VV67 1664 aaKnown RBP32.31■■■□□ 2.76
CAPN1-211ENST00000527739 KDM4FA0A1W2PPD8 638 aa32.31■■■□□ 2.76
CAPN1-211ENST00000527739 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
CAPN1-211ENST00000527739 GLI2P10070 1586 aa32.31■■■□□ 2.76
CAPN1-211ENST00000527739 KIAA0556O60303 1618 aa32.27■■■□□ 2.76
CAPN1-211ENST00000527739 KDM5BQ9UGL1 1544 aa32.26■■■□□ 2.75
CAPN1-211ENST00000527739 ZCCHC11Q5TAX3 1644 aaKnown RBP32.21■■■□□ 2.75
CAPN1-211ENST00000527739 EPRSP07814 1512 aaKnown RBP32.21■■■□□ 2.75
CAPN1-211ENST00000527739 GOLGA3Q08378 1498 aa32.19■■■□□ 2.74
CAPN1-211ENST00000527739 CTTNBP2Q8WZ74 1663 aa32.18■■■□□ 2.74
CAPN1-211ENST00000527739 EEA1Q15075 1411 aa32.17■■■□□ 2.74
CAPN1-211ENST00000527739 P3H3Q8IVL6 736 aa32.16■■■□□ 2.74
CAPN1-211ENST00000527739 MAP3K4Q9Y6R4 1608 aa32.15■■■□□ 2.74
CAPN1-211ENST00000527739 COL17A1Q9UMD9 1497 aaPredicted RBP32.14■■■□□ 2.74
CAPN1-211ENST00000527739 CHIC1Q5VXU3 224 aa32.13■■■□□ 2.73
CAPN1-211ENST00000527739 RANGAP1P46060 587 aaPredicted RBP32.11■■■□□ 2.73
CAPN1-211ENST00000527739 WDR7Q9Y4E6 1490 aa32.03■■■□□ 2.72
CAPN1-211ENST00000527739 EHMT2Q96KQ7 1210 aa32.02■■■□□ 2.72
CAPN1-211ENST00000527739 TEX14Q8IWB6 1497 aa32■■■□□ 2.71
CAPN1-211ENST00000527739 ABCA8O94911 1581 aa31.99■■■□□ 2.71
CAPN1-211ENST00000527739 ADGRL1O94910 1474 aa31.97■■■□□ 2.71
CAPN1-211ENST00000527739 ARID3CA6NKF2 412 aa31.96■■■□□ 2.71
CAPN1-211ENST00000527739 KCNH8Q96L42 1107 aa31.92■■■□□ 2.7
CAPN1-211ENST00000527739 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
CAPN1-211ENST00000527739 CD109Q6YHK3 1445 aa31.86■■■□□ 2.69
CAPN1-211ENST00000527739 CFAP43Q8NDM7 1665 aa31.84■■■□□ 2.69
CAPN1-211ENST00000527739 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
CAPN1-211ENST00000527739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.82■■■□□ 2.68
CAPN1-211ENST00000527739 HNRNPUL2Q1KMD3 747 aaKnown RBP31.82■■■□□ 2.68
CAPN1-211ENST00000527739 KIF21BO75037 1637 aa31.79■■■□□ 2.68
CAPN1-211ENST00000527739 SAMD9Q5K651 1589 aa31.79■■■□□ 2.68
CAPN1-211ENST00000527739 FHOD3Q2V2M9 1422 aa31.77■■■□□ 2.68
CAPN1-211ENST00000527739 ATP10BO94823 1461 aa31.74■■■□□ 2.67
CAPN1-211ENST00000527739 RAPGEF6Q8TEU7 1601 aa31.64■■■□□ 2.66
CAPN1-211ENST00000527739 HECW2Q9P2P5 1572 aa31.6■■■□□ 2.65
CAPN1-211ENST00000527739 EFCAB5A4FU69 1503 aa31.59■■■□□ 2.65
CAPN1-211ENST00000527739 ARAP3Q8WWN8 1544 aa31.59■■■□□ 2.65
CAPN1-211ENST00000527739 ABCA9Q8IUA7 1624 aa31.58■■■□□ 2.65
CAPN1-211ENST00000527739 ATP1B4Q9UN42 357 aaPredicted RBP31.58■■■□□ 2.65
CAPN1-211ENST00000527739 NUP153P49790 1475 aaKnown RBP31.57■■■□□ 2.64
CAPN1-211ENST00000527739 PLEKHD1A6NEE1 506 aa31.56■■■□□ 2.64
CAPN1-211ENST00000527739 ILDR1Q86SU0 546 aaPredicted RBP31.51■■■□□ 2.63
CAPN1-211ENST00000527739 RAPGEF3O95398 923 aa31.47■■■□□ 2.63
CAPN1-211ENST00000527739 ARHGAP35Q9NRY4 1499 aa31.43■■■□□ 2.62
CAPN1-211ENST00000527739 PHLDB1Q86UU1 1377 aa31.43■■■□□ 2.62
CAPN1-211ENST00000527739 FMN1Q68DA7 1419 aa31.41■■■□□ 2.62
CAPN1-211ENST00000527739 NEO1Q92859 1461 aa31.41■■■□□ 2.62
CAPN1-211ENST00000527739 FRMPD1Q5SYB0 1578 aa31.39■■■□□ 2.62
CAPN1-211ENST00000527739 CDK13Q14004 1512 aaKnown RBP31.34■■■□□ 2.61
CAPN1-211ENST00000527739 ADAMTSL3P82987 1691 aa31.32■■■□□ 2.6
CAPN1-211ENST00000527739 CDK11AQ9UQ88 783 aaPredicted RBP31.3■■■□□ 2.6
CAPN1-211ENST00000527739 PTPRMP28827 1452 aa31.27■■■□□ 2.6
CAPN1-211ENST00000527739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.26■■■□□ 2.591e-9■■■■□ 24
CAPN1-211ENST00000527739 HECW1Q76N89 1606 aa31.24■■■□□ 2.59
CAPN1-211ENST00000527739 BCORL1Q5H9F3 1711 aa31.24■■■□□ 2.59
CAPN1-211ENST00000527739 TTC37Q6PGP7 1564 aa31.23■■■□□ 2.59
CAPN1-211ENST00000527739 AKNAQ7Z591 1439 aa31.23■■■□□ 2.59
CAPN1-211ENST00000527739 DENND4BO75064 1496 aaPredicted RBP31.21■■■□□ 2.59
CAPN1-211ENST00000527739 ARID4BQ4LE39 1312 aaPredicted RBP31.21■■■□□ 2.59
CAPN1-211ENST00000527739 RICTORQ6R327 1708 aa31.21■■■□□ 2.59
CAPN1-211ENST00000527739 FANCAO15360 1455 aa31.21■■■□□ 2.59
CAPN1-211ENST00000527739 MADDQ8WXG6 1647 aa31.19■■■□□ 2.58
CAPN1-211ENST00000527739 ARHGEF40Q8TER5 1519 aa31.19■■■□□ 2.58
CAPN1-211ENST00000527739 CLIP1P30622 1438 aa31.15■■■□□ 2.58
CAPN1-211ENST00000527739 CFAP74Q9C0B2 1584 aa31.13■■■□□ 2.57
CAPN1-211ENST00000527739 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
CAPN1-211ENST00000527739 SIGLEC1Q9BZZ2 1709 aa31.08■■■□□ 2.57
CAPN1-211ENST00000527739 TROQ12816 1431 aaPredicted RBP31.07■■■□□ 2.57
CAPN1-211ENST00000527739 YEATS2Q9ULM3 1422 aa31.07■■■□□ 2.57
CAPN1-211ENST00000527739 RIMS1Q86UR5 1692 aaKnown RBP31.07■■■□□ 2.56
CAPN1-211ENST00000527739 ZMYM4Q5VZL5 1548 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms