RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
CAPN1-209ENST00000527469 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
CAPN1-209ENST00000527469 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-209ENST00000527469 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
CAPN1-209ENST00000527469 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
CAPN1-209ENST00000527469 EEA1Q15075 1411 aa22.31■■□□□ 1.16
CAPN1-209ENST00000527469 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
CAPN1-209ENST00000527469 IQGAP2Q13576 1575 aa22.29■■□□□ 1.16
CAPN1-209ENST00000527469 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-209ENST00000527469 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
CAPN1-209ENST00000527469 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
CAPN1-209ENST00000527469 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-209ENST00000527469 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-209ENST00000527469 CTTNBP2Q8WZ74 1663 aa22.17■■□□□ 1.14
CAPN1-209ENST00000527469 PTPRGP23470 1445 aa22.14■■□□□ 1.14
CAPN1-209ENST00000527469 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
CAPN1-209ENST00000527469 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
CAPN1-209ENST00000527469 NPM1P06748 294 aaKnown RBP eCLIP22.12■■□□□ 1.13
CAPN1-209ENST00000527469 DISP1Q96F81 1524 aa22.09■■□□□ 1.13
CAPN1-209ENST00000527469 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
CAPN1-209ENST00000527469 KIAA0556O60303 1618 aa22.06■■□□□ 1.12
CAPN1-209ENST00000527469 KIF21BO75037 1637 aa22.05■■□□□ 1.12
CAPN1-209ENST00000527469 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
CAPN1-209ENST00000527469 ADCY10Q96PN6 1610 aa22.01■■□□□ 1.11
CAPN1-209ENST00000527469 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
CAPN1-209ENST00000527469 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
CAPN1-209ENST00000527469 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
CAPN1-209ENST00000527469 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
CAPN1-209ENST00000527469 ABCC2Q92887 1545 aa21.91■■□□□ 1.1
CAPN1-209ENST00000527469 UHRF1BP1LA0JNW5 1464 aa21.91■■□□□ 1.1
CAPN1-209ENST00000527469 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
CAPN1-209ENST00000527469 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
CAPN1-209ENST00000527469 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
CAPN1-209ENST00000527469 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
CAPN1-209ENST00000527469 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
CAPN1-209ENST00000527469 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
CAPN1-209ENST00000527469 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
CAPN1-209ENST00000527469 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
CAPN1-209ENST00000527469 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
CAPN1-209ENST00000527469 ABCA8O94911 1581 aa21.79■■□□□ 1.08
CAPN1-209ENST00000527469 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.08
CAPN1-209ENST00000527469 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
CAPN1-209ENST00000527469 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
CAPN1-209ENST00000527469 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
CAPN1-209ENST00000527469 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
CAPN1-209ENST00000527469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-209ENST00000527469 HNRNPUL2Q1KMD3 747 aaKnown RBP21.71■■□□□ 1.07
CAPN1-209ENST00000527469 WDR7Q9Y4E6 1490 aa21.68■■□□□ 1.06
CAPN1-209ENST00000527469 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
CAPN1-209ENST00000527469 FMN1Q68DA7 1419 aa21.64■■□□□ 1.06
CAPN1-209ENST00000527469 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
CAPN1-209ENST00000527469 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-209ENST00000527469 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.05
CAPN1-209ENST00000527469 ATP10BO94823 1461 aa21.64■■□□□ 1.05
CAPN1-209ENST00000527469 GLI2P10070 1586 aa21.62■■□□□ 1.05
CAPN1-209ENST00000527469 TSPOAP1O95153 1857 aa21.62■■□□□ 1.05
CAPN1-209ENST00000527469 NUP153P49790 1475 aaKnown RBP21.61■■□□□ 1.05
CAPN1-209ENST00000527469 CLIP1P30622 1438 aa21.58■■□□□ 1.05
CAPN1-209ENST00000527469 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
CAPN1-209ENST00000527469 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
CAPN1-209ENST00000527469 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.03
CAPN1-209ENST00000527469 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
CAPN1-209ENST00000527469 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
CAPN1-209ENST00000527469 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
CAPN1-209ENST00000527469 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-209ENST00000527469 CDK13Q14004 1512 aaKnown RBP21.48■■□□□ 1.03
CAPN1-209ENST00000527469 KDM6BO15054 1643 aa21.47■■□□□ 1.03
CAPN1-209ENST00000527469 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
CAPN1-209ENST00000527469 CEP162Q5TB80 1403 aa21.45■■□□□ 1.02
CAPN1-209ENST00000527469 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
CAPN1-209ENST00000527469 CASKIN1Q8WXD9 1431 aa21.44■■□□□ 1.02
CAPN1-209ENST00000527469 PCF11O94913 1555 aaKnown RBP21.42■■□□□ 1.02
CAPN1-209ENST00000527469 MAGI3Q5TCQ9 1506 aa21.41■■□□□ 1.02
CAPN1-209ENST00000527469 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
CAPN1-209ENST00000527469 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.02
CAPN1-209ENST00000527469 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
CAPN1-209ENST00000527469 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
CAPN1-209ENST00000527469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.3■■□□□ 11e-9■■■■□ 24
CAPN1-209ENST00000527469 LRRIQ1Q96JM4 1722 aa21.3■■□□□ 1
CAPN1-209ENST00000527469 KIF14Q15058 1648 aa21.29■■□□□ 1
CAPN1-209ENST00000527469 PHLDB1Q86UU1 1377 aa21.29■■□□□ 1
CAPN1-209ENST00000527469 TTC37Q6PGP7 1564 aa21.28■■□□□ 1
CAPN1-209ENST00000527469 NEO1Q92859 1461 aa21.27■■□□□ 1
CAPN1-209ENST00000527469 COL17A1Q9UMD9 1497 aaPredicted RBP21.27■■□□□ 1
CAPN1-209ENST00000527469 FANCAO15360 1455 aa21.24■□□□□ 0.99
CAPN1-209ENST00000527469 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
CAPN1-209ENST00000527469 ARAP3Q8WWN8 1544 aa21.23■□□□□ 0.99
CAPN1-209ENST00000527469 PLCH2O75038 1416 aa21.21■□□□□ 0.99
CAPN1-209ENST00000527469 MYO5CQ9NQX4 1742 aa21.2■□□□□ 0.98
CAPN1-209ENST00000527469 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
CAPN1-209ENST00000527469 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
CAPN1-209ENST00000527469 VPS8Q8N3P4 1428 aa21.2■□□□□ 0.98
CAPN1-209ENST00000527469 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
CAPN1-209ENST00000527469 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
CAPN1-209ENST00000527469 ARHGAP5Q13017 1502 aa21.16■□□□□ 0.98
CAPN1-209ENST00000527469 DENND4BO75064 1496 aaPredicted RBP21.14■□□□□ 0.98
CAPN1-209ENST00000527469 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-209ENST00000527469 ADGRL1O94910 1474 aa21.13■□□□□ 0.97
CAPN1-209ENST00000527469 EHBP1L1Q8N3D4 1523 aa21.1■□□□□ 0.97
CAPN1-209ENST00000527469 SCAPERQ9BY12 1400 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms