RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 JPH4Q96JJ6 628 aa36.78■■■■□ 3.48
PKP3-205ENST00000527442 ADCY10Q96PN6 1610 aa36.64■■■■□ 3.46
PKP3-205ENST00000527442 MAPKBP1O60336 1514 aa36.62■■■■□ 3.45
PKP3-205ENST00000527442 ABCC10Q5T3U5 1492 aa36.62■■■■□ 3.45
PKP3-205ENST00000527442 DIP2BQ9P265 1576 aa36.6■■■■□ 3.45
PKP3-205ENST00000527442 FAM69CQ0P6D2 419 aa36.53■■■■□ 3.44
PKP3-205ENST00000527442 CUL7Q14999 1698 aa36.52■■■■□ 3.44
PKP3-205ENST00000527442 KIAA0586Q9BVV6 1533 aa36.52■■■■□ 3.44
PKP3-205ENST00000527442 NPM1P06748 294 aaKnown RBP eCLIP36.5■■■■□ 3.43
PKP3-205ENST00000527442 IGF1RP08069 1367 aa36.46■■■■□ 3.43
PKP3-205ENST00000527442 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
PKP3-205ENST00000527442 TSPOAP1O95153 1857 aa36.39■■■■□ 3.42
PKP3-205ENST00000527442 KDM6BO15054 1643 aa36.37■■■■□ 3.41
PKP3-205ENST00000527442 PTPRGP23470 1445 aa36.23■■■■□ 3.39
PKP3-205ENST00000527442 CARMIL1Q5VZK9 1371 aa36.2■■■■□ 3.39
PKP3-205ENST00000527442 IQGAP2Q13576 1575 aa36.17■■■■□ 3.38
PKP3-205ENST00000527442 TTBK1Q5TCY1 1321 aaPredicted RBP36.15■■■■□ 3.38
PKP3-205ENST00000527442 ABCC2Q92887 1545 aa36.15■■■■□ 3.38
PKP3-205ENST00000527442 CARMIL2Q6F5E8 1435 aa36.14■■■■□ 3.38
PKP3-205ENST00000527442 TNIKQ9UKE5 1360 aa36.14■■■■□ 3.38
PKP3-205ENST00000527442 PPRC1Q5VV67 1664 aaKnown RBP36.11■■■■□ 3.37
PKP3-205ENST00000527442 KDM4FA0A1W2PPD8 638 aa36.11■■■■□ 3.37
PKP3-205ENST00000527442 ASXL2Q76L83 1435 aa36.07■■■■□ 3.36
PKP3-205ENST00000527442 GLI2P10070 1586 aa36.05■■■■□ 3.36
PKP3-205ENST00000527442 UHRF1BP1LA0JNW5 1464 aa36.03■■■■□ 3.36
PKP3-205ENST00000527442 PLB1Q6P1J6 1458 aa36.03■■■■□ 3.36
PKP3-205ENST00000527442 DISP1Q96F81 1524 aa36.02■■■■□ 3.36
PKP3-205ENST00000527442 UACAQ9BZF9 1416 aa35.97■■■■□ 3.35
PKP3-205ENST00000527442 UGGT2Q9NYU1 1516 aa35.9■■■■□ 3.34
PKP3-205ENST00000527442 ZCCHC11Q5TAX3 1644 aaKnown RBP35.89■■■■□ 3.34
PKP3-205ENST00000527442 MAP3K4Q9Y6R4 1608 aa35.89■■■■□ 3.34
PKP3-205ENST00000527442 KDM5BQ9UGL1 1544 aa35.88■■■■□ 3.33
PKP3-205ENST00000527442 KIAA0556O60303 1618 aa35.87■■■■□ 3.33
PKP3-205ENST00000527442 EPRSP07814 1512 aaKnown RBP35.86■■■■□ 3.33
PKP3-205ENST00000527442 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
PKP3-205ENST00000527442 COL17A1Q9UMD9 1497 aaPredicted RBP35.8■■■■□ 3.32
PKP3-205ENST00000527442 ADGRL1O94910 1474 aa35.8■■■■□ 3.32
PKP3-205ENST00000527442 CTTNBP2Q8WZ74 1663 aa35.74■■■■□ 3.31
PKP3-205ENST00000527442 TEX14Q8IWB6 1497 aa35.72■■■■□ 3.31
PKP3-205ENST00000527442 WDR7Q9Y4E6 1490 aa35.65■■■■□ 3.3
PKP3-205ENST00000527442 ABCA8O94911 1581 aa35.55■■■■□ 3.28
PKP3-205ENST00000527442 CFAP43Q8NDM7 1665 aa35.55■■■■□ 3.28
PKP3-205ENST00000527442 GOLGA3Q08378 1498 aa35.52■■■■□ 3.28
PKP3-205ENST00000527442 HECW2Q9P2P5 1572 aa35.48■■■■□ 3.27
PKP3-205ENST00000527442 MAGI3Q5TCQ9 1506 aa35.47■■■■□ 3.27
PKP3-205ENST00000527442 ILDR1Q86SU0 546 aaPredicted RBP35.45■■■■□ 3.27
PKP3-205ENST00000527442 CD109Q6YHK3 1445 aa35.44■■■■□ 3.26
PKP3-205ENST00000527442 PRXQ9BXM0 1461 aa35.4■■■■□ 3.26
PKP3-205ENST00000527442 KCNH8Q96L42 1107 aa35.38■■■■□ 3.25
PKP3-205ENST00000527442 KIF21BO75037 1637 aa35.33■■■■□ 3.25
PKP3-205ENST00000527442 ARAP3Q8WWN8 1544 aa35.21■■■■□ 3.23
PKP3-205ENST00000527442 ATP10BO94823 1461 aa35.2■■■■□ 3.23
PKP3-205ENST00000527442 ARID3CA6NKF2 412 aa35.19■■■■□ 3.22
PKP3-205ENST00000527442 ABCA9Q8IUA7 1624 aa35.18■■■■□ 3.22
PKP3-205ENST00000527442 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
PKP3-205ENST00000527442 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
PKP3-205ENST00000527442 P3H3Q8IVL6 736 aa35.15■■■■□ 3.22
PKP3-205ENST00000527442 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
PKP3-205ENST00000527442 ADAMTSL3P82987 1691 aa35.03■■■■□ 3.2
PKP3-205ENST00000527442 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
PKP3-205ENST00000527442 FRMPD1Q5SYB0 1578 aa35■■■■□ 3.19
PKP3-205ENST00000527442 PHLDB1Q86UU1 1377 aa35■■■■□ 3.19
PKP3-205ENST00000527442 NEO1Q92859 1461 aa34.97■■■■□ 3.19
PKP3-205ENST00000527442 RAPGEF3O95398 923 aa34.94■■■■□ 3.18
PKP3-205ENST00000527442 PTPRMP28827 1452 aa34.94■■■■□ 3.18
PKP3-205ENST00000527442 NUP153P49790 1475 aaKnown RBP34.93■■■■□ 3.18
PKP3-205ENST00000527442 CSRNP3Q8WYN3 585 aa34.92■■■■□ 3.18
PKP3-205ENST00000527442 BCORL1Q5H9F3 1711 aa34.92■■■■□ 3.18
PKP3-205ENST00000527442 MADDQ8WXG6 1647 aa34.87■■■■□ 3.17
PKP3-205ENST00000527442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.86■■■■□ 3.17
PKP3-205ENST00000527442 HNRNPUL2Q1KMD3 747 aaKnown RBP34.86■■■■□ 3.17
PKP3-205ENST00000527442 FHOD3Q2V2M9 1422 aa34.84■■■■□ 3.17
PKP3-205ENST00000527442 RICTORQ6R327 1708 aa34.82■■■■□ 3.16
PKP3-205ENST00000527442 ARHGEF40Q8TER5 1519 aa34.81■■■■□ 3.16
PKP3-205ENST00000527442 RANGAP1P46060 587 aaPredicted RBP34.77■■■■□ 3.16
PKP3-205ENST00000527442 RIMS1Q86UR5 1692 aaKnown RBP34.74■■■■□ 3.15
PKP3-205ENST00000527442 CFAP74Q9C0B2 1584 aa34.74■■■■□ 3.15
PKP3-205ENST00000527442 PCF11O94913 1555 aaKnown RBP34.73■■■■□ 3.15
PKP3-205ENST00000527442 ARID4BQ4LE39 1312 aaPredicted RBP34.73■■■■□ 3.15
PKP3-205ENST00000527442 EEA1Q15075 1411 aa34.72■■■■□ 3.15
PKP3-205ENST00000527442 DENND4BO75064 1496 aaPredicted RBP34.71■■■■□ 3.15
PKP3-205ENST00000527442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.71■■■■□ 3.153e-8■□□□□ 9.7
PKP3-205ENST00000527442 TTC37Q6PGP7 1564 aa34.71■■■■□ 3.15
PKP3-205ENST00000527442 FANCAO15360 1455 aa34.68■■■■□ 3.14
PKP3-205ENST00000527442 AKNAQ7Z591 1439 aa34.68■■■■□ 3.14
PKP3-205ENST00000527442 LMTK3Q96Q04 1460 aa34.68■■■■□ 3.14
PKP3-205ENST00000527442 FBXO41Q8TF61 875 aa34.67■■■■□ 3.14
PKP3-205ENST00000527442 EFCAB5A4FU69 1503 aa34.66■■■■□ 3.14
PKP3-205ENST00000527442 PLEKHD1A6NEE1 506 aa34.66■■■■□ 3.14
PKP3-205ENST00000527442 SIGLEC1Q9BZZ2 1709 aa34.65■■■■□ 3.14
PKP3-205ENST00000527442 ZMYM4Q5VZL5 1548 aa34.65■■■■□ 3.14
PKP3-205ENST00000527442 CDK13Q14004 1512 aaKnown RBP34.59■■■■□ 3.13
PKP3-205ENST00000527442 ZFYVE16Q7Z3T8 1539 aa34.58■■■■□ 3.13
PKP3-205ENST00000527442 YEATS2Q9ULM3 1422 aa34.55■■■■□ 3.12
PKP3-205ENST00000527442 HECW1Q76N89 1606 aa34.52■■■■□ 3.12
PKP3-205ENST00000527442 POGZQ7Z3K3 1410 aa34.49■■■■□ 3.11
PKP3-205ENST00000527442 FER1L4A9Z1Z3 1794 aa34.49■■■■□ 3.11
PKP3-205ENST00000527442 MAGI2Q86UL8 1455 aa34.47■■■■□ 3.11
PKP3-205ENST00000527442 PLPPR3Q6T4P5 718 aa34.43■■■■□ 3.1
PKP3-205ENST00000527442 MYO5CQ9NQX4 1742 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms