RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
C11orf54-205ENST00000527363 CUX1P39880 1505 aa19.66■□□□□ 0.74
C11orf54-205ENST00000527363 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
C11orf54-205ENST00000527363 JPH4Q96JJ6 628 aa19.63■□□□□ 0.73
C11orf54-205ENST00000527363 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
C11orf54-205ENST00000527363 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
C11orf54-205ENST00000527363 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
C11orf54-205ENST00000527363 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
C11orf54-205ENST00000527363 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
C11orf54-205ENST00000527363 SOCS7O14512 581 aa19.54■□□□□ 0.72
C11orf54-205ENST00000527363 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
C11orf54-205ENST00000527363 TSPOAP1O95153 1857 aa19.45■□□□□ 0.7
C11orf54-205ENST00000527363 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
C11orf54-205ENST00000527363 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
C11orf54-205ENST00000527363 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
C11orf54-205ENST00000527363 GLI2P10070 1586 aa19.39■□□□□ 0.69
C11orf54-205ENST00000527363 COL17A1Q9UMD9 1497 aaPredicted RBP19.37■□□□□ 0.69
C11orf54-205ENST00000527363 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
C11orf54-205ENST00000527363 ILDR2Q71H61 639 aa19.33■□□□□ 0.68
C11orf54-205ENST00000527363 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
C11orf54-205ENST00000527363 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
C11orf54-205ENST00000527363 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
C11orf54-205ENST00000527363 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
C11orf54-205ENST00000527363 DISP3Q9P2K9 1392 aa19.29■□□□□ 0.68
C11orf54-205ENST00000527363 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
C11orf54-205ENST00000527363 PTPRGP23470 1445 aa19.26■□□□□ 0.67
C11orf54-205ENST00000527363 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
C11orf54-205ENST00000527363 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
C11orf54-205ENST00000527363 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
C11orf54-205ENST00000527363 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
C11orf54-205ENST00000527363 MAP3K4Q9Y6R4 1608 aa19.14■□□□□ 0.66
C11orf54-205ENST00000527363 CERKQ8TCT0 537 aa19.14■□□□□ 0.65
C11orf54-205ENST00000527363 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
C11orf54-205ENST00000527363 PTPRMP28827 1452 aa19.1■□□□□ 0.65
C11orf54-205ENST00000527363 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
C11orf54-205ENST00000527363 UACAQ9BZF9 1416 aa19.08■□□□□ 0.64
C11orf54-205ENST00000527363 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
C11orf54-205ENST00000527363 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
C11orf54-205ENST00000527363 KDM5BQ9UGL1 1544 aa19.05■□□□□ 0.64
C11orf54-205ENST00000527363 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
C11orf54-205ENST00000527363 MAGI3Q5TCQ9 1506 aa19.02■□□□□ 0.64
C11orf54-205ENST00000527363 CUL7Q14999 1698 aa18.98■□□□□ 0.63
C11orf54-205ENST00000527363 CD109Q6YHK3 1445 aa18.97■□□□□ 0.63
C11orf54-205ENST00000527363 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
C11orf54-205ENST00000527363 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
C11orf54-205ENST00000527363 KIF21BO75037 1637 aa18.95■□□□□ 0.62
C11orf54-205ENST00000527363 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
C11orf54-205ENST00000527363 IGF1RP08069 1367 aa18.93■□□□□ 0.62
C11orf54-205ENST00000527363 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
C11orf54-205ENST00000527363 HSPA2P54652 639 aa18.87■□□□□ 0.61
C11orf54-205ENST00000527363 PHLDB1Q86UU1 1377 aa18.87■□□□□ 0.61
C11orf54-205ENST00000527363 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
C11orf54-205ENST00000527363 CFAP43Q8NDM7 1665 aa18.83■□□□□ 0.61
C11orf54-205ENST00000527363 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
C11orf54-205ENST00000527363 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
C11orf54-205ENST00000527363 KCNH8Q96L42 1107 aa18.8■□□□□ 0.6
C11orf54-205ENST00000527363 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
C11orf54-205ENST00000527363 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
C11orf54-205ENST00000527363 IQGAP2Q13576 1575 aa18.78■□□□□ 0.6
C11orf54-205ENST00000527363 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
C11orf54-205ENST00000527363 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
C11orf54-205ENST00000527363 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
C11orf54-205ENST00000527363 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
C11orf54-205ENST00000527363 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
C11orf54-205ENST00000527363 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
C11orf54-205ENST00000527363 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
C11orf54-205ENST00000527363 NEO1Q92859 1461 aa18.65■□□□□ 0.58
C11orf54-205ENST00000527363 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
C11orf54-205ENST00000527363 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
C11orf54-205ENST00000527363 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
C11orf54-205ENST00000527363 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
C11orf54-205ENST00000527363 FANCAO15360 1455 aa18.57■□□□□ 0.56
C11orf54-205ENST00000527363 PTPRTO14522 1441 aa18.57■□□□□ 0.56
C11orf54-205ENST00000527363 ABCA8O94911 1581 aa18.54■□□□□ 0.56
C11orf54-205ENST00000527363 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
C11orf54-205ENST00000527363 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
C11orf54-205ENST00000527363 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
C11orf54-205ENST00000527363 ABCA9Q8IUA7 1624 aa18.51■□□□□ 0.55
C11orf54-205ENST00000527363 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
C11orf54-205ENST00000527363 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
C11orf54-205ENST00000527363 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
C11orf54-205ENST00000527363 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
C11orf54-205ENST00000527363 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
C11orf54-205ENST00000527363 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
C11orf54-205ENST00000527363 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
C11orf54-205ENST00000527363 PREX1Q8TCU6 1659 aa18.45■□□□□ 0.54
C11orf54-205ENST00000527363 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
C11orf54-205ENST00000527363 STRCQ7RTU9 1775 aa18.44■□□□□ 0.54
C11orf54-205ENST00000527363 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
C11orf54-205ENST00000527363 ATP10BO94823 1461 aa18.42■□□□□ 0.54
C11orf54-205ENST00000527363 MLECQ14165 292 aa18.42■□□□□ 0.54
C11orf54-205ENST00000527363 UBAP1LF5GYI3 381 aa18.4■□□□□ 0.54
C11orf54-205ENST00000527363 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.54
C11orf54-205ENST00000527363 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
C11orf54-205ENST00000527363 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
C11orf54-205ENST00000527363 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
C11orf54-205ENST00000527363 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
C11orf54-205ENST00000527363 CEBPAP49715 358 aaPredicted RBP18.36■□□□□ 0.53
C11orf54-205ENST00000527363 FER1L4A9Z1Z3 1794 aa18.35■□□□□ 0.53
C11orf54-205ENST00000527363 RICTORQ6R327 1708 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms