RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
CCDC90B-208ENST00000527025 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
CCDC90B-208ENST00000527025 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
CCDC90B-208ENST00000527025 IGF1RP08069 1367 aa15.27■□□□□ 0.04
CCDC90B-208ENST00000527025 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
CCDC90B-208ENST00000527025 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
CCDC90B-208ENST00000527025 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
CCDC90B-208ENST00000527025 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
CCDC90B-208ENST00000527025 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
CCDC90B-208ENST00000527025 NUP160Q12769 1436 aa15.23■□□□□ 0.03
CCDC90B-208ENST00000527025 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
CCDC90B-208ENST00000527025 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
CCDC90B-208ENST00000527025 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
CCDC90B-208ENST00000527025 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
CCDC90B-208ENST00000527025 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
CCDC90B-208ENST00000527025 CUL7Q14999 1698 aa15.14■□□□□ 0.01
CCDC90B-208ENST00000527025 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
CCDC90B-208ENST00000527025 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
CCDC90B-208ENST00000527025 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
CCDC90B-208ENST00000527025 JPH4Q96JJ6 628 aa15.08■□□□□ 0
CCDC90B-208ENST00000527025 RNF216Q9NWF9 866 aaPredicted RBP15.06■□□□□ 0
CCDC90B-208ENST00000527025 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
CCDC90B-208ENST00000527025 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
CCDC90B-208ENST00000527025 RNF39Q9H2S5 420 aa15.04■□□□□ -0
CCDC90B-208ENST00000527025 RAPGEF2Q9Y4G8 1499 aa15.02■□□□□ -0
CCDC90B-208ENST00000527025 PRXQ9BXM0 1461 aa15□□□□□ -0.01
CCDC90B-208ENST00000527025 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
CCDC90B-208ENST00000527025 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
CCDC90B-208ENST00000527025 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
CCDC90B-208ENST00000527025 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
CCDC90B-208ENST00000527025 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
CCDC90B-208ENST00000527025 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
CCDC90B-208ENST00000527025 EEA1Q15075 1411 aa14.86□□□□□ -0.03
CCDC90B-208ENST00000527025 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
CCDC90B-208ENST00000527025 TTBK1Q5TCY1 1321 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-208ENST00000527025 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-208ENST00000527025 PTPRGP23470 1445 aa14.83□□□□□ -0.03
CCDC90B-208ENST00000527025 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
CCDC90B-208ENST00000527025 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
CCDC90B-208ENST00000527025 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
CCDC90B-208ENST00000527025 KIF21BO75037 1637 aa14.79□□□□□ -0.04
CCDC90B-208ENST00000527025 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
CCDC90B-208ENST00000527025 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-208ENST00000527025 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
CCDC90B-208ENST00000527025 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
CCDC90B-208ENST00000527025 KIF13AQ9H1H9 1805 aa14.74□□□□□ -0.05
CCDC90B-208ENST00000527025 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
CCDC90B-208ENST00000527025 SAMD9Q5K651 1589 aa14.73□□□□□ -0.05
CCDC90B-208ENST00000527025 MAPKBP1O60336 1514 aa14.72□□□□□ -0.05
CCDC90B-208ENST00000527025 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
CCDC90B-208ENST00000527025 PLB1Q6P1J6 1458 aa14.72□□□□□ -0.05
CCDC90B-208ENST00000527025 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
CCDC90B-208ENST00000527025 ABCC2Q92887 1545 aa14.71□□□□□ -0.06
CCDC90B-208ENST00000527025 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCDC90B-208ENST00000527025 ABCA8O94911 1581 aa14.69□□□□□ -0.06
CCDC90B-208ENST00000527025 ABCC10Q5T3U5 1492 aa14.68□□□□□ -0.06
CCDC90B-208ENST00000527025 KDM5BQ9UGL1 1544 aa14.67□□□□□ -0.06
CCDC90B-208ENST00000527025 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
CCDC90B-208ENST00000527025 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-208ENST00000527025 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-208ENST00000527025 FAM69CQ0P6D2 419 aa14.65□□□□□ -0.06
CCDC90B-208ENST00000527025 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-208ENST00000527025 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
CCDC90B-208ENST00000527025 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
CCDC90B-208ENST00000527025 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
CCDC90B-208ENST00000527025 ATP10BO94823 1461 aa14.58□□□□□ -0.08
CCDC90B-208ENST00000527025 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
CCDC90B-208ENST00000527025 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-208ENST00000527025 EFCAB5A4FU69 1503 aa14.57□□□□□ -0.08
CCDC90B-208ENST00000527025 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
CCDC90B-208ENST00000527025 RAPGEF6Q8TEU7 1601 aa14.57□□□□□ -0.08
CCDC90B-208ENST00000527025 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-208ENST00000527025 NUP153P49790 1475 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-208ENST00000527025 GLI2P10070 1586 aa14.55□□□□□ -0.08
CCDC90B-208ENST00000527025 PPRC1Q5VV67 1664 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-208ENST00000527025 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
CCDC90B-208ENST00000527025 KCNH8Q96L42 1107 aa14.52□□□□□ -0.09
CCDC90B-208ENST00000527025 MAP3K4Q9Y6R4 1608 aa14.51□□□□□ -0.09
CCDC90B-208ENST00000527025 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
CCDC90B-208ENST00000527025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCDC90B-208ENST00000527025 LRRIQ1Q96JM4 1722 aa14.46□□□□□ -0.1
CCDC90B-208ENST00000527025 CDK13Q14004 1512 aaKnown RBP14.45□□□□□ -0.1
CCDC90B-208ENST00000527025 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-208ENST00000527025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-208ENST00000527025 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-208ENST00000527025 FMN1Q68DA7 1419 aa14.43□□□□□ -0.1
CCDC90B-208ENST00000527025 CLIP1P30622 1438 aa14.42□□□□□ -0.1
CCDC90B-208ENST00000527025 CFAP43Q8NDM7 1665 aa14.42□□□□□ -0.1
CCDC90B-208ENST00000527025 CD109Q6YHK3 1445 aa14.41□□□□□ -0.1
CCDC90B-208ENST00000527025 KDM6BO15054 1643 aa14.41□□□□□ -0.1
CCDC90B-208ENST00000527025 ATP1B4Q9UN42 357 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-208ENST00000527025 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
CCDC90B-208ENST00000527025 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
CCDC90B-208ENST00000527025 PCF11O94913 1555 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-208ENST00000527025 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
CCDC90B-208ENST00000527025 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
CCDC90B-208ENST00000527025 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
CCDC90B-208ENST00000527025 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
CCDC90B-208ENST00000527025 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
CCDC90B-208ENST00000527025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms